Browse FILER
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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
| #Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | life stage | trackName |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NGEN023906 | ENCODE | Download | 1,108,446 | 99,122,153 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWO | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 13,532,169 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens GM12878;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000016;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CellTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWO] [Life stage: Adult] |
| NGEN023907 | ENCODE | Download | 963,573 | 79,221,178 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWK | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 11,742,650 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000012;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=i | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWK] [Life stage: Adult] |
| NGEN023908 | ENCODE | Download | 1,152,131 | 109,119,718 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWY | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,051,807 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens GM12878 nucleolus fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000026;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-10-02;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleolusTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWY] [Life stage: Adult] |
| NGEN023909 | ENCODE | Download | 1,045,378 | 108,109,868 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWA | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,977,038 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000002;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immu | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWA] [Life stage: Adult] |
| NGEN023910 | ENCODE | Download | 1,441,695 | 155,684,376 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWB | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,554,398 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000003;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=imm | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWB] [Life stage: Adult] |
| NGEN023911 | ENCODE | Download | 1,393,852 | 145,702,780 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWP | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,180,823 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000017;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWP] [Life stage: Adult] |
| NGEN023912 | ENCODE | Download | 862,733 | 74,124,212 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWQ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 10,548,571 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000018;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exo | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWQ] [Life stage: Child] |
| NGEN023913 | ENCODE | Download | 958,033 | 91,556,462 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWR | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 11,899,316 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000019;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocri | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWR] [Life stage: Child] |
| NGEN023914 | ENCODE | Download | 1,144,284 | 103,145,838 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWZ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 13,976,706 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens HepG2 nucleolus fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000027;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-10-02;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleolusTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWZ] [Life stage: Child] |
| NGEN023915 | ENCODE | Download | 1,558,814 | 155,213,694 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWW | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,982,062 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000024;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-10-02;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocr | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWW] [Life stage: Child] |
| NGEN023916 | ENCODE | Download | 1,532,421 | 166,610,677 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWX | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,872,353 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000025;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-10-02;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWX] [Life stage: Child] |
| NGEN023917 | ENCODE | Download | 901,130 | 85,718,590 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWJ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 11,060,975 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens K562;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000011;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562CellTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_b | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWJ] [Life stage: Adult] |
| NGEN023918 | ENCODE | Download | 1,652,041 | 209,173,855 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWL | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 20,436,858 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens K562 chromatin fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000013;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562ChromatinTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slim | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWL] [Life stage: Adult] |
| NGEN023919 | ENCODE | Download | 1,471,952 | 164,744,394 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWN | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,046,156 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens K562 nucleolus fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000015;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleolusTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slim | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWN] [Life stage: Adult] |
| NGEN023920 | ENCODE | Download | 1,725,744 | 219,650,235 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWM | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 21,344,099 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens K562 nucleoplasmic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000014;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleoplasmTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_syste | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWM] [Life stage: Adult] |
| NGEN023921 | ENCODE | Download | 1,330,277 | 136,040,208 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWF | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 16,196,797 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000007;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_s | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWF] [Life stage: Adult] |
| NGEN023922 | ENCODE | Download | 1,468,724 | 163,610,332 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWG | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,991,158 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000008;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slim | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWG] [Life stage: Adult] |
| NGEN023923 | ENCODE | Download | 1,341,557 | 129,419,419 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWC | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 16,390,819 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens K562 polysomic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000004;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562PolysomeLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_syste | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWC] [Life stage: Adult] |
| NGEN023924 | ENCODE | Download | 784,692 | 62,361,132 | filtered transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWS | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 9,575,269 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000020;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWS] [Life stage: Unknown] |
| NGEN023925 | ENCODE | Download | 1,001,145 | 93,856,823 | filtered transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWT | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,376,787 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000021;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_sy | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWT] [Life stage: Unknown] |
| NGEN023926 | ENCODE | Download | 1,173,066 | 102,404,449 | filtered transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWU | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,289,523 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000022;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_s | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWU] [Life stage: Unknown] |
| NGEN023927 | ENCODE | Download | 1,214,925 | 117,173,217 | filtered transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWV | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 15,033,135 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000023;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_syst | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWV] [Life stage: Unknown] |
| NGEN023928 | ENCODE | Download | 1,001,300 | 84,845,481 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWK | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,206,706 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000012;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CytosolLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immun | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWK] [Life stage: Adult] |
| NGEN023929 | ENCODE | Download | 1,162,912 | 107,885,003 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWO | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,200,238 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens GM12878;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000016;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CellTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_ter | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWO] [Life stage: Adult] |
| NGEN023930 | ENCODE | Download | 1,093,361 | 117,895,080 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWA | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 13,570,925 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000002;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CytosolLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune s | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWA] [Life stage: Adult] |
| NGEN023931 | ENCODE | Download | 1,139,771 | 102,114,783 | filtered transcribed fragments | hg19 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR000AWH | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 13,895,668 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens prostate gland tissue male;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000009;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsProstateCellLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=prostate gland;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_bi | Reproductive | Unknown | ENCODE Prostate gland (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWH] [Life stage: Unknown] |
| NGEN023932 | ENCODE | Download | 1,135,857 | 117,074,402 | filtered transcribed fragments | hg19 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR000AWI | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,002,399 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Homo sapiens prostate gland tissue male;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000010;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsProstateCellLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=prostate gland;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosa | Reproductive | Unknown | ENCODE Prostate gland (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWI] [Life stage: Unknown] |
| NGEN023933 | ENCODE | Download | 1,208,459 | 118,429,242 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWY | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,740,815 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens GM12878 nucleolus fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000026;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-10-02;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleolusTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune sys | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWY] [Life stage: Adult] |
| NGEN023934 | ENCODE | Download | 1,481,731 | 165,302,782 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWB | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,047,135 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000003;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleusLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWB] [Life stage: Adult] |
| NGEN023935 | ENCODE | Download | 1,461,974 | 158,780,657 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWP | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,022,898 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000017;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleusLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune sys | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWP] [Life stage: Adult] |
| NGEN023936 | ENCODE | Download | 895,367 | 80,049,072 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWQ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 10,953,524 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000018;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2CytosolLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrin | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWQ] [Life stage: Child] |
| NGEN023937 | ENCODE | Download | 999,837 | 99,822,398 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWR | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,418,530 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000019;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2CytosolLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine s | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWR] [Life stage: Child] |
| NGEN023938 | ENCODE | Download | 1,205,014 | 112,511,733 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWZ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,719,385 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens HepG2 nucleolus fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000027;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-10-02;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleolusTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine sys | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWZ] [Life stage: Child] |
| NGEN023939 | ENCODE | Download | 1,638,522 | 168,467,431 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWW | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 19,956,756 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000024;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-10-02;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleusLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWW] [Life stage: Child] |
| NGEN023940 | ENCODE | Download | 1,609,265 | 181,958,620 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWX | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 19,821,981 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000025;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-10-02;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleusLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine sys | Digestive | Child | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWX] [Life stage: Child] |
| NGEN023941 | ENCODE | Download | 948,087 | 94,940,228 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWJ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 11,641,467 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens K562;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000011;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562CellTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosa | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWJ] [Life stage: Adult] |
| NGEN023942 | ENCODE | Download | 1,732,694 | 230,071,730 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWL | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 21,439,328 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens K562 chromatin fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000013;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562ChromatinTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=im | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWL] [Life stage: Adult] |
| NGEN023943 | ENCODE | Download | 1,548,330 | 181,959,756 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWN | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,992,296 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens K562 nucleolus fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000015;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleolusTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=im | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWN] [Life stage: Adult] |
| NGEN023944 | ENCODE | Download | 1,805,420 | 239,394,381 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWM | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 22,334,563 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens K562 nucleoplasmic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000014;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleoplasmTotal.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_sl | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWM] [Life stage: Adult] |
| NGEN023945 | ENCODE | Download | 1,401,067 | 149,934,074 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWF | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,072,593 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000007;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleusLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWF] [Life stage: Adult] |
| NGEN023946 | ENCODE | Download | 1,541,334 | 179,931,447 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWG | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,885,882 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000008;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleusLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=im | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWG] [Life stage: Adult] |
| NGEN023947 | ENCODE | Download | 1,405,095 | 142,238,272 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWC | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,171,102 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens K562 polysomic fraction;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000004;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562PolysomeLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_sl | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWC] [Life stage: Adult] |
| NGEN023948 | ENCODE | Download | 811,432 | 66,639,114 | transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWS | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 9,905,233 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000020;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_sys | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWS] [Life stage: Unknown] |
| NGEN023949 | ENCODE | Download | 1,039,345 | 101,277,052 | transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWT | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,848,285 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000021;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_system | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWT] [Life stage: Unknown] |
| NGEN023950 | ENCODE | Download | 1,227,524 | 109,954,576 | transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWU | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,953,351 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000022;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_syste | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWU] [Life stage: Unknown] |
| NGEN023951 | ENCODE | Download | 1,272,328 | 127,420,928 | transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWV | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 15,744,689 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000023;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_system_s | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWV] [Life stage: Unknown] |
| NGEN023952 | ENCODE | Download | 1,191,524 | 110,104,233 | transcribed fragments | hg19 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR000AWH | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,529,344 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens prostate gland tissue male;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000009;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsProstateCellLongnonpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=prostate gland;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosam | Reproductive | Unknown | ENCODE Prostate gland (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWH] [Life stage: Unknown] |
| NGEN023953 | ENCODE | Download | 1,184,960 | 127,178,715 | transcribed fragments | hg19 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR000AWI | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,610,245 | 11/24/2008 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Homo sapiens prostate gland tissue male;Lab=Thomas Gingeras, CSHL;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000010;Project=ENCODE;Award=U54HG004557;Experiment_date_released=2009-07-06;Submitted_track_name=wgEncodeAffyRnaChipTransfragsProstateCellLongpolya.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=prostate gland;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosample | Reproductive | Unknown | ENCODE Prostate gland (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWI] [Life stage: Unknown] |
| NGEN023954 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | A549 | Cell line | EFO:0001086 | Lung | ENCSR000BFB | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,859 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens A549;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSM993452,UCSC-ENCODE-hg19:wgEncodeEH002689;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonA549SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A5 | Respiratory | Adult | ENCODE A549 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFB] [Life stage: Adult] |
| NGEN023955 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | A549 | Cell line | EFO:0001086 | Lung | ENCSR000BFB | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,414 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens A549;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSM993452,UCSC-ENCODE-hg19:wgEncodeEH002689;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonA549SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A5 | Respiratory | Adult | ENCODE A549 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFB] [Life stage: Adult] |
| NGEN023956 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | COLO-829 | Cell line | EFO:0002140 | Skin | ENCSR000BFC | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,186 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens COLO829;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 45 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002690,GEO:GSM993465;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonColo829SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=COLO829;ENCODE_cell_slims=fibroblast,cancer cell,connective tissue cell;ENCODE_system_slims=integumen | Integumentary | Adult | ENCODE COLO-829 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFC] [Life stage: Adult] |
| NGEN023957 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | COLO-829 | Cell line | EFO:0002140 | Skin | ENCSR000BFC | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,225 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens COLO829;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 45 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002690,GEO:GSM993465;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonColo829SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=COLO829;ENCODE_cell_slims=fibroblast,cancer cell,connective tissue cell;ENCODE_system_slims=integumen | Integumentary | Adult | ENCODE COLO-829 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFC] [Life stage: Adult] |
| NGEN023958 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08395 | Cell line | NTR:0000483 | Skin | ENCSR000BFQ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,094 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG08395;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 85 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002704,GEO:GSM993470;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG08395;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_t | Integumentary | Adult | ENCODE AG08395 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFQ] [Life stage: Adult] |
| NGEN023959 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08395 | Cell line | NTR:0000483 | Skin | ENCSR000BFQ | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,237 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG08395;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 85 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002704,GEO:GSM993470;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG08395;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_t | Integumentary | Adult | ENCODE AG08395 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFQ] [Life stage: Adult] |
| NGEN023960 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08395 | Cell line | NTR:0000483 | Skin | ENCSR000BFQ | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,390 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG08395;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 85 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002704,GEO:GSM993470;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG08395;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_t | Integumentary | Adult | ENCODE AG08395 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFQ] [Life stage: Adult] |
| NGEN023961 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08396 | Cell line | NTR:0000484 | Lung | ENCSR000BFR | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,098 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG08396;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 85 years;Reference=NR;External_resources=GEO:GSM993473,UCSC-ENCODE-hg19:wgEncodeEH002705;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG08396;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=respiratory system;ENCODE_biosample_te | Respiratory | Adult | ENCODE AG08396 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFR] [Life stage: Adult] |
| NGEN023962 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08396 | Cell line | NTR:0000484 | Lung | ENCSR000BFR | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,056 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG08396;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 85 years;Reference=NR;External_resources=GEO:GSM993473,UCSC-ENCODE-hg19:wgEncodeEH002705;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG08396;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=respiratory system;ENCODE_biosample_te | Respiratory | Adult | ENCODE AG08396 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFR] [Life stage: Adult] |
| NGEN023963 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08396 | Cell line | NTR:0000484 | Lung | ENCSR000BFR | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,127 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG08396;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 85 years;Reference=NR;External_resources=GEO:GSM993473,UCSC-ENCODE-hg19:wgEncodeEH002705;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG08396;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=respiratory system;ENCODE_biosample_te | Respiratory | Adult | ENCODE AG08396 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFR] [Life stage: Adult] |
| NGEN023964 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG20443 | Cell line | NTR:0000485 | Skin | ENCSR000BFS | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 804,485 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG20443;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 71 years;Reference=NR;External_resources=GEO:GSM993476,UCSC-ENCODE-hg19:wgEncodeEH002706;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG20443;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_t | Integumentary | Adult | ENCODE AG20443 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFS] [Life stage: Adult] |
| NGEN023965 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG20443 | Cell line | NTR:0000485 | Skin | ENCSR000BFS | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,738 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG20443;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 71 years;Reference=NR;External_resources=GEO:GSM993476,UCSC-ENCODE-hg19:wgEncodeEH002706;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG20443;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_t | Integumentary | Adult | ENCODE AG20443 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFS] [Life stage: Adult] |
| NGEN023966 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG20443 | Cell line | NTR:0000485 | Skin | ENCSR000BFS | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,341 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens AG20443;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 71 years;Reference=NR;External_resources=GEO:GSM993476,UCSC-ENCODE-hg19:wgEncodeEH002706;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG20443;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_t | Integumentary | Adult | ENCODE AG20443 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFS] [Life stage: Adult] |
| NGEN023967 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H7-hESC | Stem cell | EFO:0005904 | Embryo | ENCSR000BFD | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,526 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens H7;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002691,GEO:GSM993503;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H7;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H7 cell,WA07,H7-ES,H7 | Embryo | Embryonic | ENCODE H7-hESC (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFD] [Life stage: Embryonic] |
| NGEN023968 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H7-hESC | Stem cell | EFO:0005904 | Embryo | ENCSR000BFD | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,922 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens H7;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002691,GEO:GSM993503;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H7;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H7 cell,WA07,H7-ES,H7 | Embryo | Embryonic | ENCODE H7-hESC (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFD] [Life stage: Embryonic] |
| NGEN023969 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H7-hESC | Stem cell | EFO:0005904 | Embryo | ENCSR000BFD | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,850 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens H7;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002691,GEO:GSM993503;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H7;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H7 cell,WA07,H7-ES,H7 | Embryo | Embryonic | ENCODE H7-hESC (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFD] [Life stage: Embryonic] |
| NGEN023970 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H9 | Stem cell | EFO:0003045 | Embryo | ENCSR000BEM | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 802,062 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens H9;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=embryonic 5 days;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001064,GEO:GSM993506;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonH9esSimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H9;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Anal | Embryo | Embryonic | ENCODE H9 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BEM] [Life stage: Embryonic] |
| NGEN023971 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H9 | Stem cell | EFO:0003045 | Embryo | ENCSR000BEM | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,434 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens H9;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=embryonic 5 days;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001064,GEO:GSM993506;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonH9esSimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H9;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Anal | Embryo | Embryonic | ENCODE H9 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BEM] [Life stage: Embryonic] |
| NGEN023972 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR000BFE | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,293 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens HEK293T;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002692,GEO:GSM993508;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonHek293tSimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HEK293T;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=NR; | Renal | Embryonic | ENCODE HEK293T (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFE] [Life stage: Embryonic] |
| NGEN023973 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR000BFE | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,794 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens HEK293T;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002692,GEO:GSM993508;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonHek293tSimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HEK293T;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=NR; | Renal | Embryonic | ENCODE HEK293T (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFE] [Life stage: Embryonic] |
| NGEN023974 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Hepatocyte | Primary cell | CL:0000182 | Liver | ENCSR000BER | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,377 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens hepatocyte;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993517,UCSC-ENCODE-hg19:wgEncodeEH001069;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-06-14;Submitted_track_name=wgEncodeDukeAffyExonHepatoSimpleSignalRep1V2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=hepatocyte;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine s | Digestive | Unknown | ENCODE Hepatocyte (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BER] [Life stage: Unknown] |
| NGEN023975 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Hepatocyte | Primary cell | CL:0000182 | Liver | ENCSR000BER | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 802,625 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens hepatocyte;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993517,UCSC-ENCODE-hg19:wgEncodeEH001069;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-06-14;Submitted_track_name=wgEncodeDukeAffyExonHepatoSimpleSignalRep2V2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=hepatocyte;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine s | Digestive | Unknown | ENCODE Hepatocyte (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BER] [Life stage: Unknown] |
| NGEN023976 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myoblast | Primary cell | CL:0000056 | Skeletal Muscle | ENCSR000BFF | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 803,245 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens myoblast;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002693,GEO:GSM993530;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=myoblast;ENCODE_cell_slims=myoblast,embryonic cell;ENCODE_system_slims=musculature;ENCODE_biosample_term_synony | Muscular | Unknown | ENCODE Myoblast (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFF] [Life stage: Unknown] |
| NGEN023977 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myoblast | Primary cell | CL:0000056 | Skeletal Muscle | ENCSR000BFF | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 803,008 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens myoblast;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002693,GEO:GSM993530;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=myoblast;ENCODE_cell_slims=myoblast,embryonic cell;ENCODE_system_slims=musculature;ENCODE_biosample_term_synony | Muscular | Unknown | ENCODE Myoblast (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFF] [Life stage: Unknown] |
| NGEN023978 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myoblast | Primary cell | CL:0000056 | Skeletal Muscle | ENCSR000BFF | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 804,409 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens myoblast;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002693,GEO:GSM993530;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=myoblast;ENCODE_cell_slims=myoblast,embryonic cell;ENCODE_system_slims=musculature;ENCODE_biosample_term_synony | Muscular | Unknown | ENCODE Myoblast (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFF] [Life stage: Unknown] |
| NGEN023979 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myotube | In vitro differentiated cells | CL:0002372 | Skeletal Muscle | ENCSR000BFG | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 804,412 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens myotube originated from myoblast;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993536,UCSC-ENCODE-hg19:wgEncodeEH002694;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=myotube;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_ | Muscular | Unknown | ENCODE Myotube (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFG] [Life stage: Unknown] |
| NGEN023980 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myotube | In vitro differentiated cells | CL:0002372 | Skeletal Muscle | ENCSR000BFG | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,173 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens myotube originated from myoblast;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993536,UCSC-ENCODE-hg19:wgEncodeEH002694;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=myotube;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_ | Muscular | Unknown | ENCODE Myotube (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFG] [Life stage: Unknown] |
| NGEN023981 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myotube | In vitro differentiated cells | CL:0002372 | Skeletal Muscle | ENCSR000BFG | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 806,277 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens myotube originated from myoblast;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993536,UCSC-ENCODE-hg19:wgEncodeEH002694;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=myotube;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_ | Muscular | Unknown | ENCODE Myotube (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFG] [Life stage: Unknown] |
| NGEN023982 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | HuH-7.5 | Cell line | EFO:0005704 | Liver | ENCSR000BET | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,737 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens HuH-7.5;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 57 years;Reference=NR;External_resources=GEO:GSM993542,UCSC-ENCODE-hg19:wgEncodeEH001071;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-06-14;Submitted_track_name=wgEncodeDukeAffyExonHuh75SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HuH-7.5;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive sys | Digestive | Adult | ENCODE HuH-7.5 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BET] [Life stage: Adult] |
| NGEN023983 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | HuH-7 | Cell line | EFO:0005384 | Liver | ENCSR000BES | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 795,149 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens HuH-7;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 57 years;Reference=NR;External_resources=GEO:GSM993540,UCSC-ENCODE-hg19:wgEncodeEH001070;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-06-14;Submitted_track_name=wgEncodeDukeAffyExonHuh7SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HuH-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,e | Digestive | Adult | ENCODE HuH-7 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BES] [Life stage: Adult] |
| NGEN023984 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | CWRU1 | Cell line | EFO:0009501 | iPSC | ENCSR000BFN | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,780 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens CWRU1;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993546,UCSC-ENCODE-hg19:wgEncodeEH002701;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonIpscwru1SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=CWRU1;ENCODE_cell_slims=induced pluripotent stem cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synon | Stem Cell | Unknown | ENCODE CWRU1 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFN] [Life stage: Unknown] |
| NGEN023985 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | CWRU1 | Cell line | EFO:0009501 | iPSC | ENCSR000BFN | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,808 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens CWRU1;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993546,UCSC-ENCODE-hg19:wgEncodeEH002701;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonIpscwru1SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=CWRU1;ENCODE_cell_slims=induced pluripotent stem cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synon | Stem Cell | Unknown | ENCODE CWRU1 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFN] [Life stage: Unknown] |
| NGEN023986 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | iPS-NIHi11 | Cell line | EFO:0007952 | iPSC | ENCSR000BFO | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,621 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens iPS-NIHi11 originated from AG20443;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 71 years;Reference=NR;External_resources=GEO:GSM993548,UCSC-ENCODE-hg19:wgEncodeEH002702;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi11SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=iPS-NIHi11;ENCODE_cell_slims=induced pluripotent stem cell,stem cell;ENC | Stem Cell | Adult | ENCODE iPS-NIHi11 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFO] [Life stage: Adult] |
| NGEN023987 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | iPS-NIHi11 | Cell line | EFO:0007952 | iPSC | ENCSR000BFO | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,238 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens iPS-NIHi11 originated from AG20443;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 71 years;Reference=NR;External_resources=GEO:GSM993548,UCSC-ENCODE-hg19:wgEncodeEH002702;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi11SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=iPS-NIHi11;ENCODE_cell_slims=induced pluripotent stem cell,stem cell;ENC | Stem Cell | Adult | ENCODE iPS-NIHi11 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFO] [Life stage: Adult] |
| NGEN023988 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | iPS-NIHi7 | Cell line | EFO:0007953 | iPSC | ENCSR000BFP | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 803,899 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens iPS-NIHi7 originated from AG08395;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 85 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002703,GEO:GSM993550;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi7SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=iPS-NIHi7;ENCODE_cell_slims=induced pluripotent stem cell,stem cell;ENCODE | Stem Cell | Adult | ENCODE iPS-NIHi7 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFP] [Life stage: Adult] |
| NGEN023989 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | iPS-NIHi7 | Cell line | EFO:0007953 | iPSC | ENCSR000BFP | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,407 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens iPS-NIHi7 originated from AG08395;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 85 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002703,GEO:GSM993550;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi7SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=iPS-NIHi7;ENCODE_cell_slims=induced pluripotent stem cell,stem cell;ENCODE | Stem Cell | Adult | ENCODE iPS-NIHi7 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFP] [Life stage: Adult] |
| NGEN023990 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BFH | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,355 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens K562 treated with 500 _M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002695,GEO:GSM993561;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopo | Cardiovascular | Adult | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFH] [Life stage: Adult] |
| NGEN023991 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BFH | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,556 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens K562 treated with 500 _M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002695,GEO:GSM993561;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopo | Cardiovascular | Adult | ENCODE K562 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFH] [Life stage: Adult] |
| NGEN023992 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BFH | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,874 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens K562 treated with 500 _M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002695,GEO:GSM993561;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopo | Cardiovascular | Adult | ENCODE K562 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFH] [Life stage: Adult] |
| NGEN023993 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BFH | 4 | 4_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,074 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens K562 treated with 500 _M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002695,GEO:GSM993561;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep4.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopo | Cardiovascular | Adult | ENCODE K562 (repl. 4) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFH] [Life stage: Adult] |
| NGEN023994 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BEU | 4 | 4_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 796,534 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens K562;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSM993557,UCSC-ENCODE-hg19:wgEncodeEH001072;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonK562SimpleSignalRep4.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_bi | Cardiovascular | Adult | ENCODE K562 (repl. 4) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BEU] [Life stage: Adult] |
| NGEN023995 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFI | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,506 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002696,GEO:GSM993568;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENC | Reproductive | Adult | ENCODE MCF-7 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFI] [Life stage: Adult] |
| NGEN023996 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFI | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,608 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002696,GEO:GSM993568;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENC | Reproductive | Adult | ENCODE MCF-7 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFI] [Life stage: Adult] |
| NGEN023997 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFI | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,778 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002696,GEO:GSM993568;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENC | Reproductive | Adult | ENCODE MCF-7 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFI] [Life stage: Adult] |
| NGEN023998 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFJ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,763 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens MCF-7 treated with 10 mM lactate for 24 hours;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 69 years;Reference=NR;External_resources=GEO:GSM993571,UCSC-ENCODE-hg19:wgEncodeEH002697;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMcf7HypoxlacSimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE | Reproductive | Adult | ENCODE MCF-7 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFJ] [Life stage: Adult] |
| NGEN023999 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFK | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,676 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002698,GEO:GSM993574;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine | Reproductive | Adult | ENCODE MCF-7 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFK] [Life stage: Adult] |
| NGEN024000 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFK | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,723 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002698,GEO:GSM993574;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine | Reproductive | Adult | ENCODE MCF-7 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFK] [Life stage: Adult] |
| NGEN024001 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFK | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,514 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002698,GEO:GSM993574;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep3.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine | Reproductive | Adult | ENCODE MCF-7 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFK] [Life stage: Adult] |
| NGEN024002 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Mel-2183 | Cell line | EFO:0005706 | Skin | ENCSR000BFL | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 802,780 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens Mel-2183;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993581,UCSC-ENCODE-hg19:wgEncodeEH002699;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMel2183SimpleSignalRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=Mel-2183;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system;ENCODE_biosample_ | Integumentary | Unknown | ENCODE Mel-2183 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFL] [Life stage: Unknown] |
| NGEN024003 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Mel-2183 | Cell line | EFO:0005706 | Skin | ENCSR000BFL | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,923 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens Mel-2183;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM993581,UCSC-ENCODE-hg19:wgEncodeEH002699;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-04-04;Submitted_track_name=wgEncodeDukeAffyExonMel2183SimpleSignalRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=Mel-2183;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=integumental system;ENCODE_biosample_ | Integumentary | Unknown | ENCODE Mel-2183 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFL] [Life stage: Unknown] |
| NGEN024004 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Osteoblast | Primary cell | CL:0000062 | Bone | ENCSR000BED | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,972 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens osteoblast;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000240,GEO:GSM993592;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-06-14;Submitted_track_name=wgEncodeDukeAffyExonOsteoSimpleSignalRep1V2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=osteoblast;ENCODE_cell_slims=connective tissue cell;ENCODE_system_slims=skeletal system;ENCODE_biosample_term_ | Skeletal | Unknown | ENCODE Osteoblast (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BED] [Life stage: Unknown] |
| NGEN024005 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Osteoblast | Primary cell | CL:0000062 | Bone | ENCSR000BED | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,468 | 12/14/2010 | 07/16/2020 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Homo sapiens osteoblast;Lab=Gregory Crawford, Duke;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000240,GEO:GSM993592;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-06-14;Submitted_track_name=wgEncodeDukeAffyExonOsteoSimpleSignalRep2V2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=osteoblast;ENCODE_cell_slims=connective tissue cell;ENCODE_system_slims=skeletal system;ENCODE_biosample_term_ | Skeletal | Unknown | ENCODE Osteoblast (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BED] [Life stage: Unknown] |
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