Browse FILER
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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
| #Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | life stage | trackName |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NGEN023906 | ENCODE | Download | 1,108,446 | 99,122,153 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWO | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 13,532,169 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=GM12878;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CellTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWO] [Orig: Biosample_summary=GM12878;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CellTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023907 | ENCODE | Download | 963,573 | 79,221,178 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWK | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 11,742,650 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWK] [Orig: Biosample_summary=GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023908 | ENCODE | Download | 1,152,131 | 109,119,718 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWY | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,051,807 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=GM12878 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleolusTotal.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWY] [Orig: Biosample_summary=GM12878 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleolusTotal.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023909 | ENCODE | Download | 1,045,378 | 108,109,868 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWA | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,977,038 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWA] [Orig: Biosample_summary=GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023910 | ENCODE | Download | 1,441,695 | 155,684,376 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWB | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,554,398 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWB] [Orig: Biosample_summary=GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023911 | ENCODE | Download | 1,393,852 | 145,702,780 | filtered transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWP | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,180,823 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWP] [Orig: Biosample_summary=GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023912 | ENCODE | Download | 862,733 | 74,124,212 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWQ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 10,548,571 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWQ] [Orig: Biosample_summary=HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023913 | ENCODE | Download | 958,033 | 91,556,462 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWR | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 11,899,316 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWR] [Orig: Biosample_summary=HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023914 | ENCODE | Download | 1,144,284 | 103,145,838 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWZ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 13,976,706 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=HepG2 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleolusTotal.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWZ] [Orig: Biosample_summary=HepG2 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleolusTotal.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023915 | ENCODE | Download | 1,558,814 | 155,213,694 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWW | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,982,062 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWW] [Orig: Biosample_summary=HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023916 | ENCODE | Download | 1,532,421 | 166,610,677 | filtered transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWX | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,872,353 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWX] [Orig: Biosample_summary=HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023917 | ENCODE | Download | 901,130 | 85,718,590 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWJ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 11,060,975 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=K562;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562CellTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWJ] [Orig: Biosample_summary=K562;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562CellTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023918 | ENCODE | Download | 1,652,041 | 209,173,855 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWL | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 20,436,858 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=K562 chromatin fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562ChromatinTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWL] [Orig: Biosample_summary=K562 chromatin fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562ChromatinTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023919 | ENCODE | Download | 1,471,952 | 164,744,394 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWN | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,046,156 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=K562 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleolusTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWN] [Orig: Biosample_summary=K562 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleolusTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023920 | ENCODE | Download | 1,725,744 | 219,650,235 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWM | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 21,344,099 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=K562 nucleoplasmic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleoplasmTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWM] [Orig: Biosample_summary=K562 nucleoplasmic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleoplasmTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023921 | ENCODE | Download | 1,330,277 | 136,040,208 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWF | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 16,196,797 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWF] [Orig: Biosample_summary=K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023922 | ENCODE | Download | 1,468,724 | 163,610,332 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWG | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,991,158 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWG] [Orig: Biosample_summary=K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023923 | ENCODE | Download | 1,341,557 | 129,419,419 | filtered transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWC | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 16,390,819 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=K562 polysomic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562PolysomeLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWC] [Orig: Biosample_summary=K562 polysomic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsK562PolysomeLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023924 | ENCODE | Download | 784,692 | 62,361,132 | filtered transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWS | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 9,575,269 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWS] [Orig: Biosample_summary=Keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023925 | ENCODE | Download | 1,001,145 | 93,856,823 | filtered transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWT | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,376,787 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWT] [Orig: Biosample_summary=Keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023926 | ENCODE | Download | 1,173,066 | 102,404,449 | filtered transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWU | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,289,523 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWU] [Orig: Biosample_summary=Keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023927 | ENCODE | Download | 1,214,925 | 117,173,217 | filtered transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWV | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 15,033,135 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWV] [Orig: Biosample_summary=Keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023928 | ENCODE | Download | 1,001,300 | 84,845,481 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWK | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,206,706 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWK] [Orig: Biosample_summary=GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023929 | ENCODE | Download | 1,162,912 | 107,885,003 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWO | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,200,238 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=GM12878;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CellTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWO] [Orig: Biosample_summary=GM12878;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CellTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023930 | ENCODE | Download | 1,093,361 | 117,895,080 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWA | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 13,570,925 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWA] [Orig: Biosample_summary=GM12878 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878CytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023931 | ENCODE | Download | 1,139,771 | 102,114,783 | filtered transcribed fragments | hg19 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR000AWH | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 13,895,668 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Prostate gland tissue male;Lab=Thomas Gingeras, CSHL;System=reproductive system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsProstateCellLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE Prostate gland (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWH] [Orig: Biosample_summary=Prostate gland tissue male;Lab=Thomas Gingeras, CSHL;System=reproductive system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsProstateCellLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023932 | ENCODE | Download | 1,135,857 | 117,074,402 | filtered transcribed fragments | hg19 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR000AWI | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,002,399 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] filtered transcribed fragments | Biosample_summary=Prostate gland tissue male;Lab=Thomas Gingeras, CSHL;System=reproductive system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsProstateCellLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE Prostate gland (repl. 1) RNA-microarray [transcription profiling by array assay] filtered transcribed fragments (broadPeak) [Experiment: ENCSR000AWI] [Orig: Biosample_summary=Prostate gland tissue male;Lab=Thomas Gingeras, CSHL;System=reproductive system;Submitted_track_name=wgEncodeAffyRnaChipFiltTransfragsProstateCellLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023933 | ENCODE | Download | 1,208,459 | 118,429,242 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWY | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,740,815 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=GM12878 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleolusTotal.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWY] [Orig: Biosample_summary=GM12878 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleolusTotal.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023934 | ENCODE | Download | 1,481,731 | 165,302,782 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWB | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,047,135 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWB] [Orig: Biosample_summary=GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023935 | ENCODE | Download | 1,461,974 | 158,780,657 | transcribed fragments | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AWP | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,022,898 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWP] [Orig: Biosample_summary=GM12878 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsGm12878NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023936 | ENCODE | Download | 895,367 | 80,049,072 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWQ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 10,953,524 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2CytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWQ] [Orig: Biosample_summary=HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2CytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023937 | ENCODE | Download | 999,837 | 99,822,398 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWR | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,418,530 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2CytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWR] [Orig: Biosample_summary=HepG2 cytosolic fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2CytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023938 | ENCODE | Download | 1,205,014 | 112,511,733 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWZ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,719,385 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=HepG2 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleolusTotal.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWZ] [Orig: Biosample_summary=HepG2 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleolusTotal.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023939 | ENCODE | Download | 1,638,522 | 168,467,431 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWW | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 19,956,756 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWW] [Orig: Biosample_summary=HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023940 | ENCODE | Download | 1,609,265 | 181,958,620 | transcribed fragments | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AWX | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 19,821,981 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HepG2 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWX] [Orig: Biosample_summary=HepG2 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsHepg2NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=10/02/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023941 | ENCODE | Download | 948,087 | 94,940,228 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWJ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 11,641,467 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=K562;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562CellTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWJ] [Orig: Biosample_summary=K562;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562CellTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023942 | ENCODE | Download | 1,732,694 | 230,071,730 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWL | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 21,439,328 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=K562 chromatin fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562ChromatinTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWL] [Orig: Biosample_summary=K562 chromatin fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562ChromatinTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023943 | ENCODE | Download | 1,548,330 | 181,959,756 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWN | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,992,296 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=K562 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleolusTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWN] [Orig: Biosample_summary=K562 nucleolus fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleolusTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023944 | ENCODE | Download | 1,805,420 | 239,394,381 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWM | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 22,334,563 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=K562 nucleoplasmic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleoplasmTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWM] [Orig: Biosample_summary=K562 nucleoplasmic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleoplasmTotal.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023945 | ENCODE | Download | 1,401,067 | 149,934,074 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWF | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,072,593 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWF] [Orig: Biosample_summary=K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023946 | ENCODE | Download | 1,541,334 | 179,931,447 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWG | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 18,885,882 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWG] [Orig: Biosample_summary=K562 nuclear fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562NucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023947 | ENCODE | Download | 1,405,095 | 142,238,272 | transcribed fragments | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AWC | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 17,171,102 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=K562 polysomic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562PolysomeLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWC] [Orig: Biosample_summary=K562 polysomic fraction;Lab=Thomas Gingeras, CSHL;System=immune system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsK562PolysomeLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023948 | ENCODE | Download | 811,432 | 66,639,114 | transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWS | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 9,905,233 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWS] [Orig: Biosample_summary=Keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023949 | ENCODE | Download | 1,039,345 | 101,277,052 | transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWT | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 12,848,285 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWT] [Orig: Biosample_summary=Keratinocyte cytosolic fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023950 | ENCODE | Download | 1,227,524 | 109,954,576 | transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWU | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,953,351 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWU] [Orig: Biosample_summary=Keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023951 | ENCODE | Download | 1,272,328 | 127,420,928 | transcribed fragments | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000AWV | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 15,744,689 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWV] [Orig: Biosample_summary=Keratinocyte nuclear fraction female;Lab=Thomas Gingeras, CSHL;System=integumental system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023952 | ENCODE | Download | 1,191,524 | 110,104,233 | transcribed fragments | hg19 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR000AWH | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,529,344 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Prostate gland tissue male;Lab=Thomas Gingeras, CSHL;System=reproductive system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsProstateCellLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE Prostate gland (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWH] [Orig: Biosample_summary=Prostate gland tissue male;Lab=Thomas Gingeras, CSHL;System=reproductive system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsProstateCellLongnonpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023953 | ENCODE | Download | 1,184,960 | 127,178,715 | transcribed fragments | hg19 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR000AWI | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed broadPeak | 14,610,245 | 11/24/08 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] transcribed fragments | Biosample_summary=Prostate gland tissue male;Lab=Thomas Gingeras, CSHL;System=reproductive system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsProstateCellLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE Prostate gland (repl. 1) RNA-microarray [transcription profiling by array assay] transcribed fragments (broadPeak) [Experiment: ENCSR000AWI] [Orig: Biosample_summary=Prostate gland tissue male;Lab=Thomas Gingeras, CSHL;System=reproductive system;Submitted_track_name=wgEncodeAffyRnaChipTransfragsProstateCellLongpolya.broadPeak.bigBed;Experiment_date_released=07/06/2009;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023954 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | A549 | Cell line | EFO:0001086 | Lung | ENCSR000BFB | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,859 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=A549;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonA549SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Respiratory | Unknown | ENCODE A549 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFB] [Orig: Biosample_summary=A549;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonA549SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023955 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | A549 | Cell line | EFO:0001086 | Lung | ENCSR000BFB | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,414 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=A549;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonA549SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Respiratory | Unknown | ENCODE A549 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFB] [Orig: Biosample_summary=A549;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonA549SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023956 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | COLO-829 | Cell line | EFO:0002140 | Skin | ENCSR000BFC | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,186 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=COLO829;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonColo829SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE COLO-829 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFC] [Orig: Biosample_summary=COLO829;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonColo829SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023957 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | COLO-829 | Cell line | EFO:0002140 | Skin | ENCSR000BFC | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,225 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=COLO829;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonColo829SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE COLO-829 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFC] [Orig: Biosample_summary=COLO829;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonColo829SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023958 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08395 | Cell line | NTR:0000483 | Skin | ENCSR000BFQ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,094 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE AG08395 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFQ] [Orig: Biosample_summary=AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023959 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08395 | Cell line | NTR:0000483 | Skin | ENCSR000BFQ | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,237 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE AG08395 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFQ] [Orig: Biosample_summary=AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023960 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08395 | Cell line | NTR:0000483 | Skin | ENCSR000BFQ | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,390 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE AG08395 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFQ] [Orig: Biosample_summary=AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08395SimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023961 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08396 | Cell line | NTR:0000484 | Lung | ENCSR000BFR | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,098 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG08396;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Respiratory | Unknown | ENCODE AG08396 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFR] [Orig: Biosample_summary=AG08396;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023962 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08396 | Cell line | NTR:0000484 | Lung | ENCSR000BFR | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,056 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG08396;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Respiratory | Unknown | ENCODE AG08396 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFR] [Orig: Biosample_summary=AG08396;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023963 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG08396 | Cell line | NTR:0000484 | Lung | ENCSR000BFR | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,127 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG08396;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Respiratory | Unknown | ENCODE AG08396 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFR] [Orig: Biosample_summary=AG08396;Lab=Gregory Crawford, Duke;System=respiratory system;Submitted_track_name=wgEncodeDukeAffyExonFibropag08396SimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023964 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG20443 | Cell line | NTR:0000485 | Skin | ENCSR000BFS | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 804,485 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE AG20443 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFS] [Orig: Biosample_summary=AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023965 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG20443 | Cell line | NTR:0000485 | Skin | ENCSR000BFS | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,738 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE AG20443 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFS] [Orig: Biosample_summary=AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023966 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | AG20443 | Cell line | NTR:0000485 | Skin | ENCSR000BFS | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,341 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE AG20443 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFS] [Orig: Biosample_summary=AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonFibropag20443SimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023967 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H7-hESC | Stem cell | EFO:0005904 | Embryo | ENCSR000BFD | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,526 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=H7;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H7-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell | Embryo | Embryonic | ENCODE H7-hESC (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFD] [Orig: Biosample_summary=H7;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H7-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem |
| NGEN023968 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H7-hESC | Stem cell | EFO:0005904 | Embryo | ENCSR000BFD | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,922 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=H7;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H7-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell | Embryo | Embryonic | ENCODE H7-hESC (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFD] [Orig: Biosample_summary=H7;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H7-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem |
| NGEN023969 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H7-hESC | Stem cell | EFO:0005904 | Embryo | ENCSR000BFD | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,850 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=H7;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H7-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell | Embryo | Embryonic | ENCODE H7-hESC (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFD] [Orig: Biosample_summary=H7;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH7esSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H7-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem |
| NGEN023970 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H9 | Stem cell | EFO:0003045 | Embryo | ENCSR000BEM | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 802,062 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=H9;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH9esSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H9;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell | Embryo | Embryonic | ENCODE H9 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BEM] [Orig: Biosample_summary=H9;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH9esSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H9;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell] [Li |
| NGEN023971 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | H9 | Stem cell | EFO:0003045 | Embryo | ENCSR000BEM | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,434 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=H9;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH9esSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H9;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell | Embryo | Embryonic | ENCODE H9 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BEM] [Orig: Biosample_summary=H9;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonH9esSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H9;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell] [Li |
| NGEN023972 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR000BFE | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,293 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=HEK293T;Lab=Gregory Crawford, Duke;System=excretory system;Submitted_track_name=wgEncodeDukeAffyExonHek293tSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Renal | Unknown | ENCODE HEK293T (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFE] [Orig: Biosample_summary=HEK293T;Lab=Gregory Crawford, Duke;System=excretory system;Submitted_track_name=wgEncodeDukeAffyExonHek293tSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023973 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR000BFE | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,794 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=HEK293T;Lab=Gregory Crawford, Duke;System=excretory system;Submitted_track_name=wgEncodeDukeAffyExonHek293tSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Renal | Unknown | ENCODE HEK293T (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFE] [Orig: Biosample_summary=HEK293T;Lab=Gregory Crawford, Duke;System=excretory system;Submitted_track_name=wgEncodeDukeAffyExonHek293tSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023974 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Hepatocyte | Primary cell | CL:0000182 | Liver | ENCSR000BER | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,377 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Hepatocyte;Lab=Gregory Crawford, Duke;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeDukeAffyExonHepatoSimpleSignalRep1V2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE Hepatocyte (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BER] [Orig: Biosample_summary=Hepatocyte;Lab=Gregory Crawford, Duke;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeDukeAffyExonHepatoSimpleSignalRep1V2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023975 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Hepatocyte | Primary cell | CL:0000182 | Liver | ENCSR000BER | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 802,625 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Hepatocyte;Lab=Gregory Crawford, Duke;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeDukeAffyExonHepatoSimpleSignalRep2V2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE Hepatocyte (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BER] [Orig: Biosample_summary=Hepatocyte;Lab=Gregory Crawford, Duke;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeDukeAffyExonHepatoSimpleSignalRep2V2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023976 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myoblast | Primary cell | CL:0000056 | Skeletal Muscle | ENCSR000BFF | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 803,245 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Muscular | Unknown | ENCODE Myoblast (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFF] [Orig: Biosample_summary=Myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023977 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myoblast | Primary cell | CL:0000056 | Skeletal Muscle | ENCSR000BFF | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 803,008 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Muscular | Unknown | ENCODE Myoblast (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFF] [Orig: Biosample_summary=Myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023978 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myoblast | Primary cell | CL:0000056 | Skeletal Muscle | ENCSR000BFF | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 804,409 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Muscular | Unknown | ENCODE Myoblast (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFF] [Orig: Biosample_summary=Myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmfshdSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023979 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myotube | In vitro differentiated cells | CL:0002372 | Skeletal Muscle | ENCSR000BFG | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 804,412 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Myotube originated from myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Muscular | Unknown | ENCODE Myotube (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFG] [Orig: Biosample_summary=Myotube originated from myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023980 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myotube | In vitro differentiated cells | CL:0002372 | Skeletal Muscle | ENCSR000BFG | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 801,173 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Myotube originated from myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Muscular | Unknown | ENCODE Myotube (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFG] [Orig: Biosample_summary=Myotube originated from myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023981 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Myotube | In vitro differentiated cells | CL:0002372 | Skeletal Muscle | ENCSR000BFG | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 806,277 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Myotube originated from myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Muscular | Unknown | ENCODE Myotube (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFG] [Orig: Biosample_summary=Myotube originated from myoblast;Lab=Gregory Crawford, Duke;System=musculature;Submitted_track_name=wgEncodeDukeAffyExonHsmmtubefshdSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023982 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | HuH-7.5 | Cell line | EFO:0005704 | Liver | ENCSR000BET | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,737 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=HuH-7.5;Lab=Gregory Crawford, Duke;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeDukeAffyExonHuh75SimpleSignalRep2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HuH-7.5 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BET] [Orig: Biosample_summary=HuH-7.5;Lab=Gregory Crawford, Duke;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeDukeAffyExonHuh75SimpleSignalRep2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023983 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | HuH-7 | Cell line | EFO:0005384 | Liver | ENCSR000BES | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 795,149 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=HuH-7;Lab=Gregory Crawford, Duke;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeDukeAffyExonHuh7SimpleSignalRep2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19 | Digestive | Unknown | ENCODE HuH-7 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BES] [Orig: Biosample_summary=HuH-7;Lab=Gregory Crawford, Duke;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeDukeAffyExonHuh7SimpleSignalRep2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023984 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | CWRU1 | Cell line | EFO:0009501 | iPSC | ENCSR000BFN | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,780 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=CWRU1;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonIpscwru1SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Stem Cell | Unknown | ENCODE CWRU1 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFN] [Orig: Biosample_summary=CWRU1;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonIpscwru1SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023985 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | CWRU1 | Cell line | EFO:0009501 | iPSC | ENCSR000BFN | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,808 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=CWRU1;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonIpscwru1SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Stem Cell | Unknown | ENCODE CWRU1 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFN] [Orig: Biosample_summary=CWRU1;Lab=Gregory Crawford, Duke;Submitted_track_name=wgEncodeDukeAffyExonIpscwru1SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023986 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | iPS-NIHi11 | Cell line | EFO:0007952 | iPSC | ENCSR000BFO | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 800,621 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=iPS-NIHi11 originated from AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi11SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Stem Cell | Unknown | ENCODE iPS-NIHi11 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFO] [Orig: Biosample_summary=iPS-NIHi11 originated from AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi11SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023987 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | iPS-NIHi11 | Cell line | EFO:0007952 | iPSC | ENCSR000BFO | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,238 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=iPS-NIHi11 originated from AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi11SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Stem Cell | Unknown | ENCODE iPS-NIHi11 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFO] [Orig: Biosample_summary=iPS-NIHi11 originated from AG20443;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi11SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023988 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | iPS-NIHi7 | Cell line | EFO:0007953 | iPSC | ENCSR000BFP | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 803,899 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=iPS-NIHi7 originated from AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi7SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Stem Cell | Unknown | ENCODE iPS-NIHi7 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFP] [Orig: Biosample_summary=iPS-NIHi7 originated from AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi7SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023989 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | iPS-NIHi7 | Cell line | EFO:0007953 | iPSC | ENCSR000BFP | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,407 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=iPS-NIHi7 originated from AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi7SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Stem Cell | Unknown | ENCODE iPS-NIHi7 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFP] [Orig: Biosample_summary=iPS-NIHi7 originated from AG08395;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonIpsnihi7SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023990 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BFH | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,355 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFH] [Orig: Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023991 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BFH | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,556 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFH] [Orig: Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023992 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BFH | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,874 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFH] [Orig: Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023993 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BFH | 4 | 4_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,074 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep4.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 4) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFH] [Orig: Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562NabutSimpleSignalRep4.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023994 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000BEU | 4 | 4_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 796,534 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=K562;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562SimpleSignalRep4.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 4) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BEU] [Orig: Biosample_summary=K562;Lab=Gregory Crawford, Duke;System=immune system;Submitted_track_name=wgEncodeDukeAffyExonK562SimpleSignalRep4.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023995 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFI | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,506 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE MCF-7 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFI] [Orig: Biosample_summary=MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023996 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFI | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,608 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE MCF-7 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFI] [Orig: Biosample_summary=MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023997 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFI | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,778 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE MCF-7 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFI] [Orig: Biosample_summary=MCF-7 expressing RNAi targeting H. sapiens CTCF;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7CtcfshrnaSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023998 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFJ | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,763 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=MCF-7 treated with 10 mM lactate for 24 hours;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;Submitted_track_name=wgEncodeDukeAffyExonMcf7HypoxlacSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE MCF-7 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFJ] [Orig: Biosample_summary=MCF-7 treated with 10 mM lactate for 24 hours;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;Submitted_track_name=wgEncodeDukeAffyExonMcf7HypoxlacSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN023999 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFK | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,676 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE MCF-7 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFK] [Orig: Biosample_summary=MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN024000 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFK | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,723 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE MCF-7 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFK] [Orig: Biosample_summary=MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN024001 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BFK | 3 | 3_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 798,514 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE MCF-7 (repl. 3) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFK] [Orig: Biosample_summary=MCF-7 expressing RNAi;Lab=Gregory Crawford, Duke;System=integumental system,exocrine system;GM=[Method- RNAi|Category- interference];Submitted_track_name=wgEncodeDukeAffyExonMcf7RandshrnaSimpleSignalRep3.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN024002 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Mel-2183 | Cell line | EFO:0005706 | Skin | ENCSR000BFL | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 802,780 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Mel-2183;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonMel2183SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Mel-2183 (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFL] [Orig: Biosample_summary=Mel-2183;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonMel2183SimpleSignalRep1.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN024003 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Mel-2183 | Cell line | EFO:0005706 | Skin | ENCSR000BFL | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,923 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Mel-2183;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonMel2183SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19 | Integumentary | Unknown | ENCODE Mel-2183 (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BFL] [Orig: Biosample_summary=Mel-2183;Lab=Gregory Crawford, Duke;System=integumental system;Submitted_track_name=wgEncodeDukeAffyExonMel2183SimpleSignalRep2.bigBed;Experiment_date_released=04/04/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN024004 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Osteoblast | Primary cell | CL:0000062 | Bone | ENCSR000BED | 1 | 1_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 797,972 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Osteoblast;Lab=Gregory Crawford, Duke;System=skeletal system;Submitted_track_name=wgEncodeDukeAffyExonOsteoSimpleSignalRep1V2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19 | Skeletal | Unknown | ENCODE Osteoblast (repl. 1) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BED] [Orig: Biosample_summary=Osteoblast;Lab=Gregory Crawford, Duke;System=skeletal system;Submitted_track_name=wgEncodeDukeAffyExonOsteoSimpleSignalRep1V2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
| NGEN024005 | ENCODE | Download | 38,378 | 1,203,357,263 | exon quantifications | hg19 | Osteoblast | Primary cell | CL:0000062 | Bone | ENCSR000BED | 2 | 2_1 | Not applicable | RNA-microarray [transcription profiling by array assay] | bed bedExonScore | 799,468 | 12/14/10 | 07/16/20 | Transcription | RNA-microarray [transcription profiling by array assay] exon quantifications | Biosample_summary=Osteoblast;Lab=Gregory Crawford, Duke;System=skeletal system;Submitted_track_name=wgEncodeDukeAffyExonOsteoSimpleSignalRep2V2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19 | Skeletal | Unknown | ENCODE Osteoblast (repl. 2) RNA-microarray [transcription profiling by array assay] exon quantifications (bedExonScore) [Experiment: ENCSR000BED] [Orig: Biosample_summary=Osteoblast;Lab=Gregory Crawford, Duke;System=skeletal system;Submitted_track_name=wgEncodeDukeAffyExonOsteoSimpleSignalRep2V2.bigBed;Experiment_date_released=06/14/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
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