Browse FILER
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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
#Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | life stage | trackName |
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NGEN024598 | ENCODE | Download | 65,565 | 19,375,394 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR914PJE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,068,606 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48648183_48648200|Zygosity- homozygous];Submitted_track_name=ENCSR914PJE_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR914PJE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48648183_48648200|Zygosity- homozygous];Submitted_track_name=ENCSR914PJE_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh3 |
NGEN024622 | ENCODE | Download | 114,471 | 38,787,312 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR622RJN | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,898,315 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5295512_5313859|Zygosity- homozygous];Submitted_track_name=ENCSR622RJN_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR622RJN] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5295512_5313859|Zygosity- homozygous];Submitted_track_name=ENCSR622RJN_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 |
NGEN024691 | ENCODE | Download | 71,913 | 21,681,503 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR744QGM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,176,989 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- homozygous];Submitted_track_name=ENCSR744QGM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR744QGM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- homozygous];Submitted_track_name=ENCSR744QGM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRC |
NGEN024699 | ENCODE | Download | 108,242 | 31,309,659 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR632CQZ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,781,884 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48818860_48818878|Zygosity- homozygous];Submitted_track_name=ENCSR632CQZ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR632CQZ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48818860_48818878|Zygosity- homozygous];Submitted_track_name=ENCSR632CQZ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh3 |
NGEN025060 | ENCODE | Download | 116,145 | 17,420,415 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR945ENZ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,172,423 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301890_5301909|Zygosity- homozygous];Submitted_track_name=ENCSR945ENZ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR945ENZ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301890_5301909|Zygosity- homozygous];Submitted_track_name=ENCSR945ENZ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38] [Li |
NGEN025088 | ENCODE | Download | 129,448 | 19,415,619 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR154AVE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,305,130 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- homozygous];Submitted_track_name=ENCSR154AVE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR154AVE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- homozygous];Submitted_track_name=ENCSR154AVE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN025208 | ENCODE | Download | 63,619 | 9,533,749 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR374YBC | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 643,254 | 1/7/19 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- homozygous];Submitted_track_name=ENCSR374YBC_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR374YBC] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- homozygous];Submitted_track_name=ENCSR374YBC_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19] [Life |
NGEN025362 | ENCODE | Download | 71,127 | 10,665,528 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR485CIR | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 722,292 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 19_1279783_1280022|Zygosity- homozygous];Submitted_track_name=ENCSR485CIR_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR485CIR] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 19_1279783_1280022|Zygosity- homozygous];Submitted_track_name=ENCSR485CIR_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19] [Life |
NGEN025588 | ENCODE | Download | 123,236 | 35,471,960 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR154AVE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 2,022,510 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- homozygous];Submitted_track_name=ENCSR154AVE_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR154AVE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- homozygous];Submitted_track_name=ENCSR154AVE_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19] |
NGEN025592 | ENCODE | Download | 60,367 | 14,600,187 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR274JIR | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 980,460 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48818860_48818878|Zygosity- homozygous];Submitted_track_name=ENCSR274JIR_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR274JIR] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48818860_48818878|Zygosity- homozygous];Submitted_track_name=ENCSR274JIR_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh3 |
NGEN025697 | ENCODE | Download | 76,536 | 11,477,028 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR997TXZ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 777,789 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- heterozygous];Submitted_track_name=ENCSR997TXZ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR997TXZ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- heterozygous];Submitted_track_name=ENCSR997TXZ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38] |
NGEN025743 | ENCODE | Download | 111,685 | 36,255,869 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR137EEM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,822,467 | 1/7/19 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309435_5309451|Zygosity- heterozygous];Submitted_track_name=ENCSR137EEM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR137EEM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309435_5309451|Zygosity- heterozygous];Submitted_track_name=ENCSR137EEM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh |
NGEN025818 | ENCODE | Download | 114,173 | 36,655,819 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR605SNG | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,889,030 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 17_38128743_38128759|Zygosity- homozygous];Submitted_track_name=ENCSR605SNG_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR605SNG] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 17_38128743_38128759|Zygosity- homozygous];Submitted_track_name=ENCSR605SNG_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh |
NGEN025833 | ENCODE | Download | 39,285 | 5,892,074 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR064EFK | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 403,480 | 1/7/19 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- heterozygous];Submitted_track_name=ENCSR064EFK_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR064EFK] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- heterozygous];Submitted_track_name=ENCSR064EFK_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19] [Li |
NGEN026041 | ENCODE | Download | 102,193 | 32,598,308 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR762CZT | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,673,606 | 7/25/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- heterozygous];Submitted_track_name=ENCSR762CZT_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR762CZT] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- heterozygous];Submitted_track_name=ENCSR762CZT_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 hg1 |
NGEN026053 | ENCODE | Download | 65,739 | 9,848,673 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR229PFU | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 664,508 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 9_100723434_100723450|Zygosity- heterozygous];Submitted_track_name=ENCSR229PFU_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR229PFU] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 9_100723434_100723450|Zygosity- heterozygous];Submitted_track_name=ENCSR229PFU_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38 |
NGEN026159 | ENCODE | Download | 84,053 | 12,604,374 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR518HJD | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 855,185 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- heterozygous];Submitted_track_name=ENCSR518HJD_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR518HJD] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- heterozygous];Submitted_track_name=ENCSR518HJD_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 hg19] |
NGEN026175 | ENCODE | Download | 107,616 | 33,688,295 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR901BRM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,780,732 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 16_163443_163445|Zygosity- homozygous];Submitted_track_name=ENCSR901BRM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR901BRM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 16_163443_163445|Zygosity- homozygous];Submitted_track_name=ENCSR901BRM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19] [L |
NGEN026205 | ENCODE | Download | 98,323 | 28,654,876 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR272KNE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,624,985 | 7/25/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- homozygous];Submitted_track_name=ENCSR272KNE_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR272KNE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- homozygous];Submitted_track_name=ENCSR272KNE_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 hg1 |
NGEN026244 | ENCODE | Download | 135,454 | 20,316,037 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR643OAB | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,366,355 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5295512_5313859|Zygosity- heterozygous];Submitted_track_name=ENCSR643OAB_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=09/22/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR643OAB] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5295512_5313859|Zygosity- heterozygous];Submitted_track_name=ENCSR643OAB_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=09/22/2016;File_analysis_title=ENCODE3 GRCh38] [ |
NGEN026383 | ENCODE | Download | 144,319 | 47,273,937 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR215FCQ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 2,383,532 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48652984|Zygosity- homozygous];Submitted_track_name=ENCSR215FCQ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR215FCQ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48652984|Zygosity- homozygous];Submitted_track_name=ENCSR215FCQ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh3 |
NGEN026461 | ENCODE | Download | 105,009 | 15,737,442 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR494CBV | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,054,852 | 1/7/19 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301895_5301910|Zygosity- homozygous];Submitted_track_name=ENCSR494CBV_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=01/08/2019;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR494CBV] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301895_5301910|Zygosity- homozygous];Submitted_track_name=ENCSR494CBV_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=01/08/2019;File_analysis_title=ENCODE3 GRCh38] [Li |
NGEN026658 | ENCODE | Download | 109,108 | 33,393,993 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR945ENZ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,800,311 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301890_5301909|Zygosity- homozygous];Submitted_track_name=ENCSR945ENZ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR945ENZ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301890_5301909|Zygosity- homozygous];Submitted_track_name=ENCSR945ENZ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38 |
NGEN026758 | ENCODE | Download | 94,591 | 28,652,472 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR423UEH | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,553,795 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- heterozygous];Submitted_track_name=ENCSR423UEH_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR423UEH] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- heterozygous];Submitted_track_name=ENCSR423UEH_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg1 |
NGEN026908 | ENCODE | Download | 82,068 | 20,529,505 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR514EOB | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,338,032 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_47677623_47677821|Zygosity- heterozygous];Submitted_track_name=ENCSR514EOB_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR514EOB] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_47677623_47677821|Zygosity- heterozygous];Submitted_track_name=ENCSR514EOB_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg1 |
NGEN027075 | ENCODE | Download | 71,677 | 21,628,633 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR744QGM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,173,121 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- homozygous];Submitted_track_name=ENCSR744QGM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR744QGM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- homozygous];Submitted_track_name=ENCSR744QGM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg1 |
NGEN027095 | ENCODE | Download | 88,377 | 13,252,238 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR561XZU | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 900,998 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- heterozygous];Submitted_track_name=ENCSR561XZU_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR561XZU] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- heterozygous];Submitted_track_name=ENCSR561XZU_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 |
NGEN027149 | ENCODE | Download | 114,738 | 17,207,980 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR818YUC | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,158,139 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_240883780_240883796|Zygosity- heterozygous];Submitted_track_name=ENCSR818YUC_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR818YUC] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_240883780_240883796|Zygosity- heterozygous];Submitted_track_name=ENCSR818YUC_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 |
NGEN027450 | ENCODE | Download | 38,670 | 9,338,135 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR064EFK | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 627,318 | 1/7/19 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- heterozygous];Submitted_track_name=ENCSR064EFK_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR064EFK] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- heterozygous];Submitted_track_name=ENCSR064EFK_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 |
NGEN027596 | ENCODE | Download | 112,783 | 16,916,214 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR967DXR | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,150,495 | 5/7/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- heterozygous];Submitted_track_name=ENCSR967DXR_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR967DXR] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- heterozygous];Submitted_track_name=ENCSR967DXR_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38] |
NGEN027615 | ENCODE | Download | 108,190 | 16,226,807 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR873PLF | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,092,542 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 19_1279783_1280022|Zygosity- heterozygous];Submitted_track_name=ENCSR873PLF_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR873PLF] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 19_1279783_1280022|Zygosity- heterozygous];Submitted_track_name=ENCSR873PLF_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38] [ |
NGEN027623 | ENCODE | Download | 74,003 | 21,754,253 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR815JAA | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,209,476 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48798986_48799001|Zygosity- heterozygous];Submitted_track_name=ENCSR815JAA_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR815JAA] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48798986_48799001|Zygosity- heterozygous];Submitted_track_name=ENCSR815JAA_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRC |
NGEN027660 | ENCODE | Download | 111,448 | 36,234,638 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR137EEM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,817,988 | 1/7/19 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309435_5309451|Zygosity- heterozygous];Submitted_track_name=ENCSR137EEM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR137EEM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309435_5309451|Zygosity- heterozygous];Submitted_track_name=ENCSR137EEM_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 |
NGEN027663 | ENCODE | Download | 68,899 | 10,329,125 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR914PJE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 706,089 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48648183_48648200|Zygosity- homozygous];Submitted_track_name=ENCSR914PJE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR914PJE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48648183_48648200|Zygosity- homozygous];Submitted_track_name=ENCSR914PJE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN027818 | ENCODE | Download | 110,126 | 16,517,595 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR101TGA | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,107,991 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- homozygous];Submitted_track_name=ENCSR101TGA_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR101TGA] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- homozygous];Submitted_track_name=ENCSR101TGA_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN027819 | ENCODE | Download | 82,244 | 25,436,102 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR141VJJ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,363,914 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR141VJJ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR141VJJ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR141VJJ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh3 |
NGEN027851 | ENCODE | Download | 93,872 | 36,829,158 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR494CBV | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,540,827 | 1/7/19 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301895_5301910|Zygosity- homozygous];Submitted_track_name=ENCSR494CBV_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=01/08/2019;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR494CBV] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301895_5301910|Zygosity- homozygous];Submitted_track_name=ENCSR494CBV_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=01/08/2019;File_analysis_title=ENCODE3 GRCh38 |
NGEN027915 | ENCODE | Download | 155,273 | 23,286,681 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR215FCQ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,572,431 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48652984|Zygosity- homozygous];Submitted_track_name=ENCSR215FCQ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR215FCQ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48652984|Zygosity- homozygous];Submitted_track_name=ENCSR215FCQ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19] [Lif |
NGEN028065 | ENCODE | Download | 94,810 | 28,703,929 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR423UEH | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,558,123 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- heterozygous];Submitted_track_name=ENCSR423UEH_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR423UEH] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- heterozygous];Submitted_track_name=ENCSR423UEH_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRC |
NGEN028193 | ENCODE | Download | 68,501 | 19,700,071 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR485CIR | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,123,275 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 19_1279783_1280022|Zygosity- homozygous];Submitted_track_name=ENCSR485CIR_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR485CIR] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 19_1279783_1280022|Zygosity- homozygous];Submitted_track_name=ENCSR485CIR_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 |
NGEN028289 | ENCODE | Download | 76,466 | 11,465,482 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR744QGM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 777,709 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- homozygous];Submitted_track_name=ENCSR744QGM_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR744QGM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- homozygous];Submitted_track_name=ENCSR744QGM_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19] [L |
NGEN028324 | ENCODE | Download | 107,928 | 16,186,303 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR903BAY | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,104,556 | 1/7/19 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 9_4763178_4763197|Zygosity- heterozygous];Submitted_track_name=ENCSR903BAY_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=01/08/2019;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR903BAY] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 9_4763178_4763197|Zygosity- heterozygous];Submitted_track_name=ENCSR903BAY_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=01/08/2019;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN028418 | ENCODE | Download | 100,902 | 15,131,800 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR423UEH | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,016,071 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- heterozygous];Submitted_track_name=ENCSR423UEH_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR423UEH] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- heterozygous];Submitted_track_name=ENCSR423UEH_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38] |
NGEN028436 | ENCODE | Download | 129,281 | 19,390,722 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR154AVE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,303,869 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- homozygous];Submitted_track_name=ENCSR154AVE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR154AVE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- homozygous];Submitted_track_name=ENCSR154AVE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19] [Lif |
NGEN028474 | ENCODE | Download | 83,301 | 24,991,497 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR561XZU | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,359,715 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- heterozygous];Submitted_track_name=ENCSR561XZU_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR561XZU] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 5_132155672_132156586|Zygosity- heterozygous];Submitted_track_name=ENCSR561XZU_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 G |
NGEN028485 | ENCODE | Download | 87,635 | 13,143,849 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR141VJJ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 891,822 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR141VJJ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR141VJJ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR141VJJ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN028502 | ENCODE | Download | 79,633 | 23,992,962 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR518HJD | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,309,326 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- heterozygous];Submitted_track_name=ENCSR518HJD_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR518HJD] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- heterozygous];Submitted_track_name=ENCSR518HJD_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 h |
NGEN028522 | ENCODE | Download | 102,430 | 32,649,505 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR762CZT | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,677,939 | 7/25/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- heterozygous];Submitted_track_name=ENCSR762CZT_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR762CZT] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- heterozygous];Submitted_track_name=ENCSR762CZT_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRC |
NGEN028553 | ENCODE | Download | 101,880 | 29,790,785 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR873PLF | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,670,021 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 19_1279783_1280022|Zygosity- heterozygous];Submitted_track_name=ENCSR873PLF_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR873PLF] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 19_1279783_1280022|Zygosity- heterozygous];Submitted_track_name=ENCSR873PLF_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 hg19 |
NGEN028672 | ENCODE | Download | 59,680 | 18,744,288 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR374YBC | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 970,488 | 1/7/19 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- homozygous];Submitted_track_name=ENCSR374YBC_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR374YBC] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- homozygous];Submitted_track_name=ENCSR374YBC_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 |
NGEN028776 | ENCODE | Download | 85,109 | 25,010,796 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR982JMP | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,403,023 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR982JMP_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR982JMP] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR982JMP_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh3 |
NGEN028832 | ENCODE | Download | 109,893 | 16,481,041 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR527IGO | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,118,466 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- homozygous];Submitted_track_name=ENCSR527IGO_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR527IGO] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- homozygous];Submitted_track_name=ENCSR527IGO_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN028931 | ENCODE | Download | 103,587 | 15,536,460 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR272KNE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,055,831 | 7/25/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- homozygous];Submitted_track_name=ENCSR272KNE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR272KNE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- homozygous];Submitted_track_name=ENCSR272KNE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRCh38] |
NGEN028956 | ENCODE | Download | 108,321 | 29,222,251 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR967DXR | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,773,886 | 5/7/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- heterozygous];Submitted_track_name=ENCSR967DXR_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR967DXR] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- heterozygous];Submitted_track_name=ENCSR967DXR_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRC |
NGEN029003 | ENCODE | Download | 154,909 | 23,234,114 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR324UCN | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,554,366 | 7/25/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- homozygous];Submitted_track_name=ENCSR324UCN_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR324UCN] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- homozygous];Submitted_track_name=ENCSR324UCN_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 hg19] [Lif |
NGEN029021 | ENCODE | Download | 144,087 | 47,202,793 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR215FCQ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 2,380,216 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48652984|Zygosity- homozygous];Submitted_track_name=ENCSR215FCQ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR215FCQ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48652984|Zygosity- homozygous];Submitted_track_name=ENCSR215FCQ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19] |
NGEN029165 | ENCODE | Download | 126,931 | 19,038,009 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR826CTO | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,276,102 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- heterozygous];Submitted_track_name=ENCSR826CTO_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR826CTO] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- heterozygous];Submitted_track_name=ENCSR826CTO_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19] [L |
NGEN029173 | ENCODE | Download | 117,113 | 17,565,376 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR901BRM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,182,057 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 16_163443_163445|Zygosity- homozygous];Submitted_track_name=ENCSR901BRM_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR901BRM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 16_163443_163445|Zygosity- homozygous];Submitted_track_name=ENCSR901BRM_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19] [Life s |
NGEN029235 | ENCODE | Download | 52,156 | 7,819,165 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR165BGV | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 527,166 | 12/21/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309398_5309417|Zygosity- homozygous];Submitted_track_name=ENCSR165BGV_rep1_1_se_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR165BGV] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309398_5309417|Zygosity- homozygous];Submitted_track_name=ENCSR165BGV_rep1_1_se_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 hg19] [Life |
NGEN029269 | ENCODE | Download | 131,040 | 40,906,836 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR048BUO | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 2,165,202 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- heterozygous];Submitted_track_name=ENCSR048BUO_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR048BUO] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- heterozygous];Submitted_track_name=ENCSR048BUO_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRC |
NGEN029276 | ENCODE | Download | 100,663 | 15,095,875 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR423UEH | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,013,984 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- heterozygous];Submitted_track_name=ENCSR423UEH_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR423UEH] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48641400_48641619|Zygosity- heterozygous];Submitted_track_name=ENCSR423UEH_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19] [L |
NGEN029322 | ENCODE | Download | 140,786 | 21,115,632 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR048BUO | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,422,441 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- heterozygous];Submitted_track_name=ENCSR048BUO_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR048BUO] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- heterozygous];Submitted_track_name=ENCSR048BUO_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38] |
NGEN029374 | ENCODE | Download | 98,554 | 28,714,533 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR272KNE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,629,058 | 7/25/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- homozygous];Submitted_track_name=ENCSR272KNE_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR272KNE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- homozygous];Submitted_track_name=ENCSR272KNE_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRC |
NGEN029429 | ENCODE | Download | 87,484 | 13,121,157 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR141VJJ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 890,270 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR141VJJ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR141VJJ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR141VJJ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19] [Lif |
NGEN029434 | ENCODE | Download | 103,337 | 15,498,915 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR272KNE | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,053,265 | 7/25/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- homozygous];Submitted_track_name=ENCSR272KNE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR272KNE] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- homozygous];Submitted_track_name=ENCSR272KNE_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 hg19] [L |
NGEN029456 | ENCODE | Download | 105,418 | 29,874,967 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR527IGO | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,735,125 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- homozygous];Submitted_track_name=ENCSR527IGO_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR527IGO] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- homozygous];Submitted_track_name=ENCSR527IGO_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19] |
NGEN029479 | ENCODE | Download | 109,662 | 16,446,209 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR527IGO | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,116,048 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- homozygous];Submitted_track_name=ENCSR527IGO_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR527IGO] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48797877_48798090|Zygosity- homozygous];Submitted_track_name=ENCSR527IGO_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 hg19] [Lif |
NGEN029509 | ENCODE | Download | 96,515 | 14,475,576 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR577TXK | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 972,987 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48658991_48659154|Zygosity- homozygous];Submitted_track_name=ENCSR577TXK_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR577TXK] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48658991_48659154|Zygosity- homozygous];Submitted_track_name=ENCSR577TXK_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 hg19] [Lif |
NGEN029520 | ENCODE | Download | 155,506 | 23,321,771 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR215FCQ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,574,602 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48652984|Zygosity- homozygous];Submitted_track_name=ENCSR215FCQ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR215FCQ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48652984|Zygosity- homozygous];Submitted_track_name=ENCSR215FCQ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN029599 | ENCODE | Download | 48,220 | 16,022,886 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR165BGV | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 792,200 | 12/21/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309398_5309417|Zygosity- homozygous];Submitted_track_name=ENCSR165BGV_rep1_1_se_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR165BGV] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309398_5309417|Zygosity- homozygous];Submitted_track_name=ENCSR165BGV_rep1_1_se_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 hg19] |
NGEN029711 | ENCODE | Download | 155,168 | 23,273,449 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR324UCN | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,557,401 | 7/25/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- homozygous];Submitted_track_name=ENCSR324UCN_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR324UCN] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- homozygous];Submitted_track_name=ENCSR324UCN_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN029797 | ENCODE | Download | 39,418 | 5,911,874 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR064EFK | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 404,915 | 1/7/19 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- heterozygous];Submitted_track_name=ENCSR064EFK_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR064EFK] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- heterozygous];Submitted_track_name=ENCSR064EFK_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38] [ |
NGEN029926 | ENCODE | Download | 78,722 | 21,757,665 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR447ULX | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,295,085 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 17_38128743_38128759|Zygosity- heterozygous];Submitted_track_name=ENCSR447ULX_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR447ULX] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 17_38128743_38128759|Zygosity- heterozygous];Submitted_track_name=ENCSR447ULX_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GR |
NGEN030179 | ENCODE | Download | 103,362 | 28,446,225 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR903BAY | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,692,404 | 1/7/19 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 9_4763178_4763197|Zygosity- heterozygous];Submitted_track_name=ENCSR903BAY_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=01/08/2019;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR903BAY] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 9_4763178_4763197|Zygosity- heterozygous];Submitted_track_name=ENCSR903BAY_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=01/08/2019;File_analysis_title=ENCODE3 GRCh3 |
NGEN030226 | ENCODE | Download | 84,290 | 12,639,691 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR518HJD | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 857,892 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- heterozygous];Submitted_track_name=ENCSR518HJD_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR518HJD] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- heterozygous];Submitted_track_name=ENCSR518HJD_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 |
NGEN030291 | ENCODE | Download | 38,801 | 9,361,813 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR064EFK | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 630,089 | 1/7/19 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- heterozygous];Submitted_track_name=ENCSR064EFK_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR064EFK] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- heterozygous];Submitted_track_name=ENCSR064EFK_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh |
NGEN030318 | ENCODE | Download | 82,221 | 20,565,769 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR514EOB | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,340,276 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_47677623_47677821|Zygosity- heterozygous];Submitted_track_name=ENCSR514EOB_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR514EOB] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_47677623_47677821|Zygosity- heterozygous];Submitted_track_name=ENCSR514EOB_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRC |
NGEN030343 | ENCODE | Download | 109,953 | 16,491,694 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR101TGA | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,106,619 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- homozygous];Submitted_track_name=ENCSR101TGA_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR101TGA] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- homozygous];Submitted_track_name=ENCSR101TGA_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19] [Lif |
NGEN030436 | ENCODE | Download | 120,075 | 18,000,130 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR137EEM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,215,601 | 1/7/19 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309435_5309451|Zygosity- heterozygous];Submitted_track_name=ENCSR137EEM_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR137EEM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309435_5309451|Zygosity- heterozygous];Submitted_track_name=ENCSR137EEM_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38] [ |
NGEN030443 | ENCODE | Download | 116,477 | 36,739,191 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR826CTO | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,920,580 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- heterozygous];Submitted_track_name=ENCSR826CTO_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR826CTO] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- heterozygous];Submitted_track_name=ENCSR826CTO_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRC |
NGEN030445 | ENCODE | Download | 83,014 | 24,486,952 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR167DFU | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,359,534 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48798950_48798965|Zygosity- homozygous];Submitted_track_name=ENCSR167DFU_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR167DFU] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48798950_48798965|Zygosity- homozygous];Submitted_track_name=ENCSR167DFU_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh3 |
NGEN030447 | ENCODE | Download | 81,399 | 12,207,420 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR447ULX | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 827,632 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 17_38128743_38128759|Zygosity- heterozygous];Submitted_track_name=ENCSR447ULX_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR447ULX] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 17_38128743_38128759|Zygosity- heterozygous];Submitted_track_name=ENCSR447ULX_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38] |
NGEN030757 | ENCODE | Download | 114,232 | 17,132,218 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR632CQZ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,163,069 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48818860_48818878|Zygosity- homozygous];Submitted_track_name=ENCSR632CQZ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR632CQZ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48818860_48818878|Zygosity- homozygous];Submitted_track_name=ENCSR632CQZ_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38] [L |
NGEN030890 | ENCODE | Download | 116,873 | 35,477,140 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR724SCF | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,925,533 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301890_5301909|Zygosity- heterozygous];Submitted_track_name=ENCSR724SCF_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR724SCF] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301890_5301909|Zygosity- heterozygous];Submitted_track_name=ENCSR724SCF_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh |
NGEN030903 | ENCODE | Download | 82,080 | 25,390,443 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR141VJJ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,360,426 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR141VJJ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR141VJJ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR141VJJ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 hg19] |
NGEN030964 | ENCODE | Download | 103,786 | 29,878,927 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR101TGA | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,703,820 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- homozygous];Submitted_track_name=ENCSR101TGA_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR101TGA] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48624125_48624294|Zygosity- homozygous];Submitted_track_name=ENCSR101TGA_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh3 |
NGEN031085 | ENCODE | Download | 81,613 | 28,155,804 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR636VCX | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,334,320 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_240883780_240883796|Zygosity- homozygous];Submitted_track_name=ENCSR636VCX_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR636VCX] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_240883780_240883796|Zygosity- homozygous];Submitted_track_name=ENCSR636VCX_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRC |
NGEN031108 | ENCODE | Download | 79,856 | 24,057,503 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR518HJD | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,312,359 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- heterozygous];Submitted_track_name=ENCSR518HJD_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR518HJD] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 2_204628220_204628649|Zygosity- heterozygous];Submitted_track_name=ENCSR518HJD_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 G |
NGEN031122 | ENCODE | Download | 72,098 | 22,600,918 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR997TXZ | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,187,660 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- heterozygous];Submitted_track_name=ENCSR997TXZ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR997TXZ] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48653368_48653547|Zygosity- heterozygous];Submitted_track_name=ENCSR997TXZ_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/14/2016;File_analysis_title=ENCODE3 GRC |
NGEN031191 | ENCODE | Download | 142,738 | 44,345,228 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR324UCN | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 2,350,796 | 7/25/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- homozygous];Submitted_track_name=ENCSR324UCN_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR324UCN] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48470207_48470363|Zygosity- homozygous];Submitted_track_name=ENCSR324UCN_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/26/2018;File_analysis_title=ENCODE3 GRCh3 |
NGEN031281 | ENCODE | Download | 84,948 | 24,989,807 | hotspots | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR982JMP | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,401,108 | 5/14/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR982JMP_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR982JMP] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR982JMP_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 hg19] |
NGEN031512 | ENCODE | Download | 84,359 | 12,652,532 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR514EOB | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 858,888 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_47677623_47677821|Zygosity- heterozygous];Submitted_track_name=ENCSR514EOB_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR514EOB] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 1_47677623_47677821|Zygosity- heterozygous];Submitted_track_name=ENCSR514EOB_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38] |
NGEN031586 | ENCODE | Download | 90,879 | 26,498,673 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR577TXK | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 1,496,946 | 5/4/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48658991_48659154|Zygosity- homozygous];Submitted_track_name=ENCSR577TXK_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR577TXK] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48658991_48659154|Zygosity- homozygous];Submitted_track_name=ENCSR577TXK_rep1_1_pe_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh3 |
NGEN031605 | ENCODE | Download | 48,385 | 16,081,619 | hotspots | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR165BGV | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed broadPeak | 794,691 | 12/21/18 | 07/16/20 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] hotspots | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309398_5309417|Zygosity- homozygous];Submitted_track_name=ENCSR165BGV_rep1_1_se_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] hotspots (broadPeak) [Experiment: ENCSR165BGV] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309398_5309417|Zygosity- homozygous];Submitted_track_name=ENCSR165BGV_rep1_1_se_bwa_biorep_filtered_hotspots.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 |
NGEN031691 | ENCODE | Download | 63,797 | 9,560,609 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR374YBC | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 645,123 | 1/7/19 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- homozygous];Submitted_track_name=ENCSR374YBC_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR374YBC] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5305999_5306050|Zygosity- homozygous];Submitted_track_name=ENCSR374YBC_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=08/31/2015;File_analysis_title=ENCODE3 GRCh38] [Li |
NGEN031867 | ENCODE | Download | 89,519 | 13,425,299 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR560CCF | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 906,342 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301895_5301910|Zygosity- heterozygous];Submitted_track_name=ENCSR560CCF_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR560CCF] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5301895_5301910|Zygosity- heterozygous];Submitted_track_name=ENCSR560CCF_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 GRCh38] [ |
NGEN031908 | ENCODE | Download | 122,152 | 18,319,803 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR605SNG | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,232,956 | 5/4/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 17_38128743_38128759|Zygosity- homozygous];Submitted_track_name=ENCSR605SNG_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR605SNG] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 17_38128743_38128759|Zygosity- homozygous];Submitted_track_name=ENCSR605SNG_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38] [ |
NGEN031964 | ENCODE | Download | 90,499 | 13,573,605 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR982JMP | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 912,434 | 5/14/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR982JMP_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 hg19 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR982JMP] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 X_48652787_48653547|Zygosity- homozygous];Submitted_track_name=ENCSR982JMP_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=05/11/2016;File_analysis_title=ENCODE3 hg19] [Lif |
NGEN031984 | ENCODE | Download | 117,343 | 17,600,050 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR901BRM | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 1,184,353 | 5/9/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 16_163443_163445|Zygosity- homozygous];Submitted_track_name=ENCSR901BRM_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR901BRM] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 16_163443_163445|Zygosity- homozygous];Submitted_track_name=ENCSR901BRM_rep1_1_pe_bwa_biorep_filtered_peaks.bb;Experiment_date_released=07/20/2016;File_analysis_title=ENCODE3 GRCh38] [Life |
NGEN032122 | ENCODE | Download | 52,354 | 7,848,586 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR165BGV | 1 | 1_1 | Not applicable | GM DNase-seq [genetic modification followed by DNase-seq] | bed narrowPeak | 529,662 | 12/21/18 | 08/22/24 | Called peaks | GM DNase-seq [genetic modification followed by DNase-seq] peaks | Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309398_5309417|Zygosity- homozygous];Submitted_track_name=ENCSR165BGV_rep1_1_se_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) GM DNase-seq [genetic modification followed by DNase-seq] peaks (narrowPeak) [Experiment: ENCSR165BGV] [Orig: Biosample_summary=K562 genetically modified (deletion) using TALEN;Lab=John Stamatoyannopoulos, UW;System=immune system;GM=[Method- TALEN|Category- deletion|Site coordinates- hg19 11_5309398_5309417|Zygosity- homozygous];Submitted_track_name=ENCSR165BGV_rep1_1_se_bwa_biorep_filtered_peaks.bb;Experiment_date_released=11/02/2016;File_analysis_title=ENCODE3 GRCh38] [Li |
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