Browse FILER
To select specific FILER datasets, use any of the filters below in any order:
Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
| #Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | Life Stage | trackName |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NGEN000020 | ENCODE | Download | 63,867 | 106,000,000,000 | long range chromatin interactions | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000BZW | 1 | 1_1 | POLR2A | ChIA-PET | bed bed12 | 2,040,457 | 09/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=HeLa-S3;Lab=Yijun Ruan, JAX;System=reproductive system;Submitted_track_name=wgEncodeGisChiaPetHelas3Pol2InteractionsRep1.bigBed;Experiment_date_released=05/24/2012;File_analysis_title=Lab custom hg19;schema=BED12 | Reproductive | Unknown | ENCODE HeLa-S3 (repl. 1) ChIA-PET POLR2A long range chromatin interactions (bed12) [Experiment: ENCSR000BZW] [Life stage: Unknown] |
| NGEN000026 | ENCODE | Download | 4,318 | 1,736,183,127 | long range chromatin interactions | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BZZ | 1 | 1_1 | ESR1 | ChIA-PET | bed bed12 | 164,541 | 09/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=MCF-7;Lab=Yijun Ruan, JAX;System=integumental system,exocrine system;Submitted_track_name=wgEncodeGisChiaPetMcf7EraaInteractionsRep1.bigBed;Experiment_date_released=05/24/2012;File_analysis_title=Lab custom hg19;schema=BED12 | Reproductive | Unknown | ENCODE MCF-7 (repl. 1) ChIA-PET ESR1 long range chromatin interactions (bed12) [Experiment: ENCSR000BZZ] [Life stage: Unknown] |
| NGEN000027 | ENCODE | Download | 5,498 | 2,320,670,350 | long range chromatin interactions | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BZZ | 2 | 2_1 | ESR1 | ChIA-PET | bed bed12 | 208,287 | 09/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=MCF-7;Lab=Yijun Ruan, JAX;System=integumental system,exocrine system;Submitted_track_name=wgEncodeGisChiaPetMcf7EraaInteractionsRep2.bigBed;Experiment_date_released=05/24/2012;File_analysis_title=Lab custom hg19;schema=BED12 | Reproductive | Unknown | ENCODE MCF-7 (repl. 2) ChIA-PET ESR1 long range chromatin interactions (bed12) [Experiment: ENCSR000BZZ] [Life stage: Unknown] |
| NGEN000028 | ENCODE | Download | 2,433 | 1,698,620,256 | long range chromatin interactions | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BZZ | 3 | 3_1 | ESR1 | ChIA-PET | bed bed12 | 92,117 | 09/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=MCF-7;Lab=Yijun Ruan, JAX;System=integumental system,exocrine system;Submitted_track_name=wgEncodeGisChiaPetMcf7EraaInteractionsRep3.bigBed;Experiment_date_released=05/24/2012;File_analysis_title=Lab custom hg19;schema=BED12 | Reproductive | Unknown | ENCODE MCF-7 (repl. 3) ChIA-PET ESR1 long range chromatin interactions (bed12) [Experiment: ENCSR000BZZ] [Life stage: Unknown] |
| NGEN000033 | ENCODE | Download | 11,832 | 15,721,374,097 | long range chromatin interactions | hg19 | NB4 | Cell line | EFO:0002798 | Blood | ENCSR000CAB | 1 | 1_1 | POLR2A | ChIA-PET | bed bed12 | 392,479 | 09/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=NB4;Lab=Yijun Ruan, JAX;System=skeletal system,immune system;Submitted_track_name=wgEncodeGisChiaPetNb4Pol2InteractionsRep1.bigBed;Experiment_date_released=05/24/2012;File_analysis_title=Lab custom hg19;schema=BED12 | Cardiovascular | Unknown | ENCODE NB4 (repl. 1) ChIA-PET POLR2A long range chromatin interactions (bed12) [Experiment: ENCSR000CAB] [Life stage: Unknown] |
| NGEN036892 | ENCODE | Download | 51,241 | 44,543,252 | peaks | hg38 | CD8+ alpha-beta T cell | Primary cell | NTR:0000666 | Blood | ENCSR217TFN | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 782,707 | 07/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Stimulated activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0072H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD8-positive, alpha-beta T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR217TFN] [Life stage: Adult] |
| NGEN036893 | ENCODE | Download | 48,188 | 41,613,025 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000499 | Blood | ENCSR154MAJ | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 764,111 | 07/20/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0093V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD4-positive, alpha-beta memory T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR154MAJ] [Life stage: Adult] |
| NGEN036894 | ENCODE | Download | 28,343 | 36,611,297 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR789ZIJ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 444,933 | 10/15/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=HepG2 child 15 years;Lab=Yijun Ruan, JAX;System=digestive system,exocrine system,endocrine system;Submitted_track_name=LHH0021N.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=12/18/2020;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Child | ENCODE HepG2 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR789ZIJ] [Life stage: Child] |
| NGEN036895 | ENCODE | Download | 34,492 | 25,195,847 | peaks | hg38 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR676KCF | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 525,496 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=HEK293T;Lab=Yijun Ruan, JAX;System=excretory system;Submitted_track_name=LHH0084H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=01/25/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Renal | Unknown | ENCODE HEK293T (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR676KCF] [Life stage: Unknown] |
| NGEN036896 | ENCODE | Download | 43,339 | 27,876,258 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000896 | Blood | ENCSR093CTT | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 672,569 | 07/15/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0042H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR093CTT] [Life stage: Adult] |
| NGEN036897 | ENCODE | Download | 49,416 | 44,776,439 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR448ZLA | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 783,787 | 07/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0057H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR448ZLA] [Life stage: Adult] |
| NGEN036898 | ENCODE | Download | 29,381 | 23,937,348 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR880DSH | 3 | 3_1 | POLR2A | ChIA-PET | bed broadPeak | 442,126 | 02/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=K562 adult 53 years;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHK0012V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=02/26/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE K562 (repl. 3) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR880DSH] [Life stage: Adult] |
| NGEN036899 | ENCODE | Download | 66,968 | 53,256,388 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000665 | Blood | ENCSR291RCO | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 1,045,590 | 07/21/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Stimulated activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0048H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD4-positive, alpha-beta memory T cell;Experiment_date_released=08/02/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR291RCO] [Life stage: Adult] |
| NGEN036900 | ENCODE | Download | 42,940 | 38,689,183 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR448ZLA | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 659,740 | 07/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0073H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR448ZLA] [Life stage: Adult] |
| NGEN036901 | ENCODE | Download | 73,116 | 63,122,252 | peaks | hg38 | Naive thymus-derived CD4+, alpha-beta T cell | Primary cell | CL:0000895 | Blood | ENCSR763OCG | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,092,805 | 07/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0063H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Naive thymus-derived CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;premapping_cell_type=Naive thymus-derived CD4+, alpha-beta T cell;tissue_of_origin=Thymus;schema=BED6+3 | Cardiovascular | Adult | ENCODE Naive thymus-derived CD4+, alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR763OCG] [Life stage: Adult] |
| NGEN036902 | ENCODE | Download | 60,133 | 58,106,153 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000498 | Blood | ENCSR569TBN | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 941,213 | 07/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=CD4-positive, alpha-beta memory T cell male adult (43 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0078H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR569TBN] [Life stage: Adult] |
| NGEN036903 | ENCODE | Download | 24,649 | 13,888,556 | peaks | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR095SXC | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 389,923 | 08/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=H1;Lab=Charles Lee;Submitted_track_name=LHES0002H1H2E2H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell;schema=BED6+3 | Embryo | Embryonic | ENCODE H1-hESC (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR095SXC] [Life stage: Embryonic] |
| NGEN036904 | ENCODE | Download | 65,672 | 55,264,394 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000896 | Blood | ENCSR314TNQ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 985,700 | 07/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0058H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR314TNQ] [Life stage: Adult] |
| NGEN036905 | ENCODE | Download | 40,061 | 29,287,763 | peaks | hg38 | CD8+ T cell | Primary cell | CL:0000625 | Blood | ENCSR180GEY | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 627,644 | 07/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=CD8-positive, alpha-beta T cell male adult (21 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0043H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD8-positive, alpha-beta T cell;Experiment_date_released=08/02/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR180GEY] [Life stage: Adult] |
| NGEN036906 | ENCODE | Download | 73,830 | 65,665,853 | peaks | hg38 | CD8+ alpha-beta naive T cell | Primary cell | NTR:0000667 | Blood | ENCSR114QCL | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,115,296 | 07/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Stimulated activated naive CD8-positive, alpha-beta T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0091V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated naive CD8-positive, alpha-beta T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta naive T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR114QCL] [Life stage: Adult] |
| NGEN036907 | ENCODE | Download | 63,643 | 49,563,216 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000664 | Blood | ENCSR550JJT | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 965,016 | 07/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Stimulated activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0070H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated naive CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR550JJT] [Life stage: Adult] |
| NGEN036908 | ENCODE | Download | 123,479 | 107,897,263 | peaks | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR278IZK | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 1,942,593 | 03/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=HCT116 adult 48 years;Lab=Charles Lee;System=digestive system;Submitted_track_name=LHH0127V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Adult | ENCODE HCT116 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR278IZK] [Life stage: Adult] |
| NGEN036909 | ENCODE | Download | 64,394 | 61,068,290 | peaks | hg38 | CD8+ alpha-beta memory cell | Primary cell | NTR:0000504 | Blood | ENCSR041UPG | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 958,843 | 07/27/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0087V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD8-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR041UPG] [Life stage: Adult] |
| NGEN036910 | ENCODE | Download | 22,163 | 12,491,598 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | NTR:0000663 | Blood | ENCSR962FFY | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 337,828 | 07/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Stimulated activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0035H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR962FFY] [Life stage: Adult] |
| NGEN036911 | ENCODE | Download | 46,302 | 33,139,011 | peaks | hg38 | CD8+ alpha-beta T cell | Primary cell | CL:0000906 | Blood | ENCSR408MRB | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 729,499 | 07/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0044H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD8-positive, alpha-beta T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR408MRB] [Life stage: Adult] |
| NGEN036912 | ENCODE | Download | 25,082 | 14,323,145 | peaks | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR095SXC | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 403,624 | 08/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=H1;Lab=Charles Lee;Submitted_track_name=LHES0003H1H2E3H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell;schema=BED6+3 | Embryo | Embryonic | ENCODE H1-hESC (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR095SXC] [Life stage: Embryonic] |
| NGEN036913 | ENCODE | Download | 103,156 | 78,619,964 | peaks | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR035PVZ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 1,549,264 | 04/01/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=HCT116 adult 48 years;Lab=Charles Lee;System=digestive system;Submitted_track_name=LHH0128V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Adult | ENCODE HCT116 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR035PVZ] [Life stage: Adult] |
| NGEN036914 | ENCODE | Download | 68,425 | 60,673,045 | peaks | hg38 | CD8+ alpha-beta memory cell | Primary cell | CL:0000909 | Blood | ENCSR149TQU | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,011,443 | 07/26/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=CD8-positive, alpha-beta memory T cell male adult (30 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0086V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD8-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR149TQU] [Life stage: Adult] |
| NGEN036915 | ENCODE | Download | 43,425 | 28,175,621 | peaks | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR905HWW | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 630,237 | 08/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=GM12878;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHG0045V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR905HWW] [Life stage: Unknown] |
| NGEN036916 | ENCODE | Download | 55,562 | 46,289,006 | peaks | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR905HWW | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 814,487 | 08/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=GM12878;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHG0035N_0035V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR905HWW] [Life stage: Unknown] |
| NGEN036917 | ENCODE | Download | 28,451 | 28,036,631 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR597AKG | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 473,877 | 10/16/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=K562 adult 53 years;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHK0002N.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=03/12/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE K562 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR597AKG] [Life stage: Adult] |
| NGEN036918 | ENCODE | Download | 50,295 | 35,766,014 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR345UIQ | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 768,621 | 07/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0038N.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR345UIQ] [Life stage: Adult] |
| NGEN036919 | ENCODE | Download | 64,128 | 54,351,018 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000896 | Blood | ENCSR314TNQ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 941,486 | 07/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0040N.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR314TNQ] [Life stage: Adult] |
| NGEN036920 | ENCODE | Download | 54,636 | 38,638,646 | peaks | hg38 | CD8+ alpha-beta T cell | Primary cell | NTR:0000666 | Blood | ENCSR531UMR | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 863,779 | 07/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Stimulated activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0045H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD8-positive, alpha-beta T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR531UMR] [Life stage: Adult] |
| NGEN036921 | ENCODE | Download | 36,719 | 35,099,632 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR411IVB | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 593,837 | 10/10/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=HepG2 child 15 years;Lab=Yijun Ruan, JAX;System=digestive system,exocrine system,endocrine system;Submitted_track_name=LHH0022N.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=03/12/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Child | ENCODE HepG2 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR411IVB] [Life stage: Child] |
| NGEN036922 | ENCODE | Download | 65,073 | 56,625,638 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000497 | Blood | ENCSR402NAQ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 997,511 | 07/18/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0064H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated naive CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR402NAQ] [Life stage: Adult] |
| NGEN036923 | ENCODE | Download | 49,793 | 45,801,642 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR404FPI | 3 | 3_1 | CTCF | ChIA-PET | bed broadPeak | 820,002 | 06/29/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Charles Lee;System=reproductive system,circulatory system;Submitted_track_name=LHH0142V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein;schema=BED6+3 | Embryo | Newborn | ENCODE Endothelial cell (repl. 3) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR404FPI] [Life stage: Newborn] |
| NGEN036924 | ENCODE | Download | 47,567 | 42,998,985 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR404FPI | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 764,764 | 03/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Charles Lee;System=reproductive system,circulatory system;Submitted_track_name=LHH0129V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein;schema=BED6+3 | Embryo | Newborn | ENCODE Endothelial cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR404FPI] [Life stage: Newborn] |
| NGEN036925 | ENCODE | Download | 31,520 | 26,602,453 | peaks | hg38 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR773XVD | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 483,337 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=HEK293T;Lab=Yijun Ruan, JAX;System=excretory system;Submitted_track_name=LHH0083H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=12/16/2020;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Renal | Unknown | ENCODE HEK293T (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR773XVD] [Life stage: Unknown] |
| NGEN036926 | ENCODE | Download | 60,163 | 46,391,683 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | NTR:0000663 | Blood | ENCSR733XLQ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 870,080 | 07/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Stimulated activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0076H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR733XLQ] [Life stage: Adult] |
| NGEN036927 | ENCODE | Download | 26,768 | 19,280,861 | peaks | hg38 | MCF 10A | Cell line | EFO:0001200 | Female Reproductive | ENCSR403ZYJ | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 416,404 | 10/20/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=MCF 10A adult 36 years;Lab=Yijun Ruan, JAX;System=exocrine system,integumental system;Submitted_track_name=LHM0007H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=01/25/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Reproductive | Adult | ENCODE MCF 10A (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR403ZYJ] [Life stage: Adult] |
| NGEN036928 | ENCODE | Download | 46,168 | 33,743,325 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | NTR:0000663 | Blood | ENCSR962FFY | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 688,297 | 07/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Stimulated activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0039H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR962FFY] [Life stage: Adult] |
| NGEN036929 | ENCODE | Download | 28,828 | 27,846,208 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR597AKG | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 482,755 | 10/16/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=K562 adult 53 years;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHK0001N.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=03/12/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE K562 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR597AKG] [Life stage: Adult] |
| NGEN036930 | ENCODE | Download | 18,969 | 12,780,419 | peaks | hg38 | A549 | Cell line | EFO:0001086 | Lung | ENCSR911ZMB | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 305,298 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=A549 adult 58 years;Lab=Yijun Ruan, JAX;System=respiratory system;Submitted_track_name=LHA0006H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=01/25/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Respiratory | Adult | ENCODE A549 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR911ZMB] [Life stage: Adult] |
| NGEN036931 | ENCODE | Download | 34,617 | 28,035,679 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR080OMN | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 498,804 | 03/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Charles Lee;System=reproductive system,circulatory system;Submitted_track_name=LHH0131V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein;schema=BED6+3 | Embryo | Newborn | ENCODE Endothelial cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR080OMN] [Life stage: Newborn] |
| NGEN036932 | ENCODE | Download | 55,607 | 42,924,100 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000498 | Blood | ENCSR106INW | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 853,653 | 07/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=CD4-positive, alpha-beta memory T cell male adult (43 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0046H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta memory T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR106INW] [Life stage: Adult] |
| NGEN036933 | ENCODE | Download | 58,692 | 48,924,469 | peaks | hg38 | CD8+ alpha-beta memory T cell | Primary cell | NTR:0000669 | Blood | ENCSR114KEO | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 834,255 | 07/27/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Stimulated activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0088_88V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD8-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR114KEO] [Life stage: Adult] |
| NGEN036934 | ENCODE | Download | 32,662 | 27,466,426 | peaks | hg38 | A549 | Cell line | EFO:0001086 | Lung | ENCSR138NSW | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 495,907 | 01/12/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=A549 adult 58 years;Lab=Yijun Ruan, JAX;System=respiratory system;Submitted_track_name=LHA0027V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=01/12/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Respiratory | Adult | ENCODE A549 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR138NSW] [Life stage: Adult] |
| NGEN036935 | ENCODE | Download | 58,446 | 44,937,475 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | NTR:0000663 | Blood | ENCSR733XLQ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 850,802 | 07/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Stimulated activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0075H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR733XLQ] [Life stage: Adult] |
| NGEN036936 | ENCODE | Download | 28,585 | 21,685,354 | peaks | hg38 | MCF 10A | Cell line | EFO:0001200 | Female Reproductive | ENCSR403ZYJ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 454,496 | 10/20/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=MCF 10A adult 36 years;Lab=Yijun Ruan, JAX;System=exocrine system,integumental system;Submitted_track_name=LHM0010H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=01/25/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Reproductive | Adult | ENCODE MCF 10A (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR403ZYJ] [Life stage: Adult] |
| NGEN036937 | ENCODE | Download | 24,683 | 17,215,728 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR404FPI | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 410,960 | 06/29/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Charles Lee;System=reproductive system,circulatory system;Submitted_track_name=LHH0089V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein;schema=BED6+3 | Embryo | Newborn | ENCODE Endothelial cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR404FPI] [Life stage: Newborn] |
| NGEN036938 | ENCODE | Download | 70,144 | 66,531,073 | peaks | hg38 | Naive thymus-derived CD8+, alpha-beta T cell | Primary cell | CL:0000900 | Blood | ENCSR064OTE | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,055,720 | 07/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Naive thymus-derived CD8-positive, alpha-beta T cell male adult (30 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0090V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Naive thymus-derived CD8-positive, alpha-beta T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE Naive thymus-derived CD8+, alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR064OTE] [Life stage: Adult] |
| NGEN036939 | ENCODE | Download | 48,527 | 48,808,330 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR857MYZ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 748,750 | 12/17/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=HepG2 child 15 years;Lab=Yijun Ruan, JAX;System=digestive system,endocrine system,exocrine system;Submitted_track_name=LHH0124_124V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=12/30/2020;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Child | ENCODE HepG2 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR857MYZ] [Life stage: Child] |
| NGEN036940 | ENCODE | Download | 54,365 | 40,357,463 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000664 | Blood | ENCSR550JJT | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 836,748 | 07/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Stimulated activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0051H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated naive CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR550JJT] [Life stage: Adult] |
| NGEN036941 | ENCODE | Download | 50,785 | 41,533,436 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000664 | Blood | ENCSR446MTI | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 735,447 | 07/18/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Stimulated activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0097_97V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated naive CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR446MTI] [Life stage: Adult] |
| NGEN036942 | ENCODE | Download | 34,139 | 24,274,761 | peaks | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR782EKZ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 486,107 | 08/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=H1;Lab=Charles Lee;Submitted_track_name=LHES0006N.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell;schema=BED6+3 | Embryo | Embryonic | ENCODE H1-hESC (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR782EKZ] [Life stage: Embryonic] |
| NGEN036943 | ENCODE | Download | 72,052 | 66,092,291 | peaks | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR278IZK | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 1,128,267 | 03/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=HCT116 adult 48 years;Lab=Charles Lee;System=digestive system;Submitted_track_name=LHH0118V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Adult | ENCODE HCT116 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR278IZK] [Life stage: Adult] |
| NGEN036944 | ENCODE | Download | 46,772 | 32,234,121 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000497 | Blood | ENCSR731OFF | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 661,466 | 07/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0069H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated naive CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR731OFF] [Life stage: Adult] |
| NGEN036945 | ENCODE | Download | 44,788 | 33,552,986 | peaks | hg38 | CD8+ alpha-beta memory T cell | Primary cell | NTR:0000669 | Blood | ENCSR378IUJ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 705,644 | 07/27/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Stimulated activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0085V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD8-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR378IUJ] [Life stage: Adult] |
| NGEN036946 | ENCODE | Download | 33,389 | 25,239,846 | peaks | hg38 | CD8+ alpha-beta memory cell | Primary cell | CL:0000909 | Blood | ENCSR187PXW | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 529,430 | 07/26/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=CD8-positive, alpha-beta memory T cell male adult (30 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0083V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD8-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR187PXW] [Life stage: Adult] |
| NGEN036947 | ENCODE | Download | 22,766 | 15,907,228 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR345UIQ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 368,780 | 07/13/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0036H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR345UIQ] [Life stage: Adult] |
| NGEN036948 | ENCODE | Download | 33,822 | 26,894,403 | peaks | hg38 | Naive thymus-derived CD4+, alpha-beta T cell | Primary cell | CL:0000895 | Blood | ENCSR763OCG | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 504,333 | 07/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0095V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Naive thymus-derived CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;premapping_cell_type=Naive thymus-derived CD4+, alpha-beta T cell;tissue_of_origin=Thymus;schema=BED6+3 | Cardiovascular | Adult | ENCODE Naive thymus-derived CD4+, alpha-beta T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR763OCG] [Life stage: Adult] |
| NGEN036949 | ENCODE | Download | 24,144 | 20,761,867 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR411IVB | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 387,598 | 10/15/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=HepG2 child 15 years;Lab=Yijun Ruan, JAX;System=digestive system,exocrine system,endocrine system;Submitted_track_name=LHH0038H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=03/12/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Child | ENCODE HepG2 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR411IVB] [Life stage: Child] |
| NGEN036950 | ENCODE | Download | 29,801 | 20,009,261 | peaks | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR184YZV | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 473,169 | 12/31/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=GM12878;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHG0052H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR184YZV] [Life stage: Unknown] |
| NGEN036951 | ENCODE | Download | 60,917 | 48,578,015 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000499 | Blood | ENCSR154MAJ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 951,109 | 07/20/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0047H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD4-positive, alpha-beta memory T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR154MAJ] [Life stage: Adult] |
| NGEN036952 | ENCODE | Download | 55,494 | 47,880,739 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000499 | Blood | ENCSR877ZRR | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 849,932 | 07/20/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0077H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD4-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR877ZRR] [Life stage: Adult] |
| NGEN036953 | ENCODE | Download | 27,926 | 25,246,855 | peaks | hg38 | A549 | Cell line | EFO:0001086 | Lung | ENCSR138NSW | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 421,144 | 01/12/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=A549 adult 58 years;Lab=Yijun Ruan, JAX;System=respiratory system;Submitted_track_name=LHA0026V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=01/12/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Respiratory | Adult | ENCODE A549 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR138NSW] [Life stage: Adult] |
| NGEN036954 | ENCODE | Download | 45,615 | 33,716,960 | peaks | hg38 | CD8+ alpha-beta T cell | Primary cell | CL:0000906 | Blood | ENCSR982KEM | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 689,224 | 07/24/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0071H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD8-positive, alpha-beta T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR982KEM] [Life stage: Adult] |
| NGEN036955 | ENCODE | Download | 31,049 | 20,569,097 | peaks | hg38 | CD8+ T cell | Primary cell | CL:0000625 | Blood | ENCSR180GEY | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 482,965 | 07/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=CD8-positive, alpha-beta T cell male adult (21 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0067H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD8-positive, alpha-beta T cell;Experiment_date_released=08/02/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR180GEY] [Life stage: Adult] |
| NGEN036956 | ENCODE | Download | 22,600 | 15,650,012 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR345UIQ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 362,709 | 07/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0036V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR345UIQ] [Life stage: Adult] |
| NGEN036957 | ENCODE | Download | 32,240 | 25,060,934 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR080OMN | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 469,515 | 03/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Charles Lee;System=reproductive system,circulatory system;Submitted_track_name=LHH0130V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein;schema=BED6+3 | Embryo | Newborn | ENCODE Endothelial cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR080OMN] [Life stage: Newborn] |
| NGEN036958 | ENCODE | Download | 51,429 | 46,244,534 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR448ZLA | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 815,933 | 07/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0057V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR448ZLA] [Life stage: Adult] |
| NGEN036959 | ENCODE | Download | 59,706 | 43,399,705 | peaks | hg38 | Naive thymus-derived CD4+, alpha-beta T cell | Primary cell | CL:0000895 | Blood | ENCSR120LMS | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 890,781 | 07/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0049H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Naive thymus-derived CD4-positive, alpha-beta T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;premapping_cell_type=Naive thymus-derived CD4+, alpha-beta T cell;tissue_of_origin=Thymus;schema=BED6+3 | Cardiovascular | Adult | ENCODE Naive thymus-derived CD4+, alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR120LMS] [Life stage: Adult] |
| NGEN036960 | ENCODE | Download | 54,970 | 42,256,844 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000498 | Blood | ENCSR106INW | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 862,530 | 07/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=CD4-positive, alpha-beta memory T cell male adult (43 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0092V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD4-positive, alpha-beta memory T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR106INW] [Life stage: Adult] |
| NGEN036961 | ENCODE | Download | 28,828 | 19,810,962 | peaks | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR782EKZ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 427,189 | 08/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=H1;Lab=Charles Lee;Submitted_track_name=LHES0007H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell;schema=BED6+3 | Embryo | Embryonic | ENCODE H1-hESC (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR782EKZ] [Life stage: Embryonic] |
| NGEN036962 | ENCODE | Download | 66,383 | 58,593,350 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000664 | Blood | ENCSR446MTI | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,017,037 | 07/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Stimulated activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0065H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated naive CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR446MTI] [Life stage: Adult] |
| NGEN036963 | ENCODE | Download | 60,310 | 54,109,552 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000665 | Blood | ENCSR159PXF | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 942,739 | 07/21/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Stimulated activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0079H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD4-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR159PXF] [Life stage: Adult] |
| NGEN036964 | ENCODE | Download | 59,341 | 51,874,539 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000665 | Blood | ENCSR291RCO | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 937,815 | 07/21/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Stimulated activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0094V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Stimulated activated CD4-positive, alpha-beta memory T cell;Experiment_date_released=08/02/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR291RCO] [Life stage: Adult] |
| NGEN036965 | ENCODE | Download | 102,798 | 63,058,596 | peaks | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR035PVZ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,508,972 | 04/01/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=HCT116 adult 48 years;Lab=Charles Lee;System=digestive system;Submitted_track_name=LHH0098V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=04/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Adult | ENCODE HCT116 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR035PVZ] [Life stage: Adult] |
| NGEN036966 | ENCODE | Download | 46,963 | 51,048,001 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR857MYZ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 730,278 | 10/16/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=HepG2 child 15 years;Lab=Yijun Ruan, JAX;System=digestive system,endocrine system,exocrine system;Submitted_track_name=LHH0123V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=12/30/2020;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Digestive | Child | ENCODE HepG2 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR857MYZ] [Life stage: Child] |
| NGEN036967 | ENCODE | Download | 30,274 | 23,746,147 | peaks | hg38 | MCF 10A | Cell line | EFO:0001200 | Female Reproductive | ENCSR499JGQ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 467,110 | 10/20/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=MCF 10A adult 36 years;Lab=Yijun Ruan, JAX;System=exocrine system,integumental system;Submitted_track_name=LHM0012H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=12/16/2020;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Reproductive | Adult | ENCODE MCF 10A (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR499JGQ] [Life stage: Adult] |
| NGEN036968 | ENCODE | Download | 34,532 | 29,271,887 | peaks | hg38 | MCF 10A | Cell line | EFO:0001200 | Female Reproductive | ENCSR499JGQ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 535,629 | 10/20/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=MCF 10A adult 36 years;Lab=Yijun Ruan, JAX;System=exocrine system,integumental system;Submitted_track_name=LHM0008H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=12/16/2020;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Reproductive | Adult | ENCODE MCF 10A (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR499JGQ] [Life stage: Adult] |
| NGEN036969 | ENCODE | Download | 52,712 | 39,380,390 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000497 | Blood | ENCSR731OFF | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 811,376 | 07/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0050H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated naive CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR731OFF] [Life stage: Adult] |
| NGEN036970 | ENCODE | Download | 32,545 | 30,115,089 | peaks | hg38 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR773XVD | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 499,934 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=HEK293T;Lab=Yijun Ruan, JAX;System=excretory system;Submitted_track_name=LHH0085V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=12/16/2020;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Renal | Unknown | ENCODE HEK293T (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR773XVD] [Life stage: Unknown] |
| NGEN036971 | ENCODE | Download | 31,503 | 26,014,302 | peaks | hg38 | CD8+ alpha-beta memory cell | Primary cell | NTR:0000504 | Blood | ENCSR697ZHG | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 494,912 | 07/27/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0084V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD8-positive, alpha-beta memory T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR697ZHG] [Life stage: Adult] |
| NGEN036972 | ENCODE | Download | 18,082 | 11,932,192 | peaks | hg38 | A549 | Cell line | EFO:0001086 | Lung | ENCSR911ZMB | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 280,574 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=A549 adult 58 years;Lab=Yijun Ruan, JAX;System=respiratory system;Submitted_track_name=LHA0005H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=01/25/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Respiratory | Adult | ENCODE A549 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR911ZMB] [Life stage: Adult] |
| NGEN036973 | ENCODE | Download | 40,986 | 29,857,334 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000896 | Blood | ENCSR093CTT | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 639,925 | 07/15/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0074H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR093CTT] [Life stage: Adult] |
| NGEN036974 | ENCODE | Download | 31,686 | 23,098,719 | peaks | hg38 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR676KCF | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 483,977 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=HEK293T;Lab=Yijun Ruan, JAX;System=excretory system;Submitted_track_name=LHH0086V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=01/25/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Renal | Unknown | ENCODE HEK293T (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR676KCF] [Life stage: Unknown] |
| NGEN036975 | ENCODE | Download | 36,390 | 27,947,066 | peaks | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR184YZV | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 535,221 | 08/26/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=GM12878;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHG0066V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR184YZV] [Life stage: Unknown] |
| NGEN036976 | ENCODE | Download | 14,083 | 8,375,078 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR880DSH | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 213,872 | 10/16/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=K562 adult 53 years;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHK0009H.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=02/26/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE K562 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR880DSH] [Life stage: Adult] |
| NGEN036977 | ENCODE | Download | 28,283 | 22,923,833 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR880DSH | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 416,866 | 02/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=K562 adult 53 years;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHK0011V.for.BROWSER.spp.z6.broadPeak.bb;Experiment_date_released=02/26/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE K562 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR880DSH] [Life stage: Adult] |
| NGEN036978 | ENCODE | Download | 33,159 | 26,810,936 | peaks | hg38 | CD8+ T cell | Primary cell | CL:0000625 | Blood | ENCSR185VQH | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 517,872 | 07/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=CD8-positive, alpha-beta T cell male adult (21 years);Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0066H.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=CD8-positive, alpha-beta T cell;Experiment_date_released=10/06/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD8+ T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR185VQH] [Life stage: Adult] |
| NGEN036979 | ENCODE | Download | 40,553 | 26,778,552 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000497 | Blood | ENCSR402NAQ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 554,112 | 07/18/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHT0096_96V.for.BROWSER.spp.z6.broadPeak.bb;previous_filer_cell_type=Activated naive CD4-positive, alpha-beta T cell;Experiment_date_released=07/21/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+3 | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR402NAQ] [Life stage: Adult] |
| NGEN036980 | ENCODE | Download | 383,714 | 161,679,621 | peaks | hg38 | HEK293 | Cell line | EFO:0001182 | Kidney | ENCSR934CYB | 2 | 2_1 | POLR2A | ChIA-PET | bed narrowPeak | 9,641,450 | 10/09/2020 | 08/22/2024 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=HEK293;Lab=Yijun Ruan, JAX;System=excretory system;Submitted_track_name=LHH0087V.no_input_all_peaks.maxscore1000.narrowPeak.bb;Experiment_date_released=12/16/2020;File_analysis_title=Lab custom GRCh38;schema=BED6+4 | Renal | Unknown | ENCODE HEK293 (repl. 2) ChIA-PET POLR2A peaks (narrowPeak) [Experiment: ENCSR934CYB] [Life stage: Unknown] |
| NGEN036981 | ENCODE | Download | 569,730 | 224,283,686 | peaks | hg38 | SK-N-SH | Cell line | EFO:0003072 | Brain | ENCSR514HBO | 2 | 2_1 | CTCF | ChIA-PET | bed narrowPeak | 13,459,245 | 10/08/2020 | 08/22/2024 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=SK-N-SH;Lab=Yijun Ruan, JAX;System=central nervous system;Submitted_track_name=LHS0003H.no_input_all_peaks.maxscore1000.narrowPeak.bb;Experiment_date_released=01/25/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+4 | Nervous | Unknown | ENCODE SK-N-SH (repl. 2) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR514HBO] [Life stage: Unknown] |
| NGEN036982 | ENCODE | Download | 394,237 | 128,926,832 | peaks | hg38 | BJ | Cell line | EFO:0002779 | Connective Tissue | ENCSR956IXE | 1 | 1_1 | POLR2A | ChIA-PET | bed narrowPeak | 10,176,713 | 09/22/2021 | 08/22/2024 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=BJ;Lab=Yijun Ruan, JAX;System=reproductive system;Submitted_track_name=LHB0010.no_input_all_peaks.maxscore1000.narrowPeak.bb;Experiment_date_released=09/23/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+4 | Skeletal | Unknown | ENCODE BJ (repl. 1) ChIA-PET POLR2A peaks (narrowPeak) [Experiment: ENCSR956IXE] [Life stage: Unknown] |
| NGEN036983 | ENCODE | Download | 266,095 | 116,336,830 | peaks | hg38 | AG04450 | Cell line | EFO:0006270 | Lung | ENCSR514BNX | 2 | 2_1 | POLR2A | ChIA-PET | bed narrowPeak | 6,958,717 | 10/10/2020 | 08/22/2024 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=AG04450;Lab=Yijun Ruan, JAX;System=respiratory system;Submitted_track_name=LHA0017V.no_input_all_peaks.maxscore1000.narrowPeak.bb;Experiment_date_released=02/23/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+4 | Respiratory | Unknown | ENCODE AG04450 (repl. 2) ChIA-PET POLR2A peaks (narrowPeak) [Experiment: ENCSR514BNX] [Life stage: Unknown] |
| NGEN036984 | ENCODE | Download | 533,453 | 212,743,354 | peaks | hg38 | Common myeloid progenitor cell | Primary cell | CL:0001059 | Blood | ENCSR421NGZ | 1 | 1_1 | CTCF | ChIA-PET | bed narrowPeak | 13,368,719 | 07/29/2021 | 08/22/2024 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Common myeloid progenitor, CD34-positive;Lab=Yijun Ruan, JAX;System=immune system;Submitted_track_name=LHHSC0001H.no_input_all_peaks.maxscore1000.narrowPeak.bb;previous_filer_cell_type=Common myeloid progenitor, CD34-positive;Experiment_date_released=08/02/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+4 | Cardiovascular | Unknown | ENCODE Common myeloid progenitor cell (repl. 1) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR421NGZ] [Life stage: Unknown] |
| NGEN036985 | ENCODE | Download | 440,366 | 190,496,509 | peaks | hg38 | AG04449 | Cell line | CLO:0034837 | Skin | ENCSR580MNR | 2 | 2_1 | CTCF | ChIA-PET | bed narrowPeak | 11,182,061 | 10/09/2020 | 08/22/2024 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=AG04449;Lab=Yijun Ruan, JAX;System=integumental system;Submitted_track_name=LHA0011H.no_input_all_peaks.maxscore1000.narrowPeak.bb;Experiment_date_released=01/25/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+4 | Integumentary | Unknown | ENCODE AG04449 (repl. 2) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR580MNR] [Life stage: Unknown] |
| NGEN036986 | ENCODE | Download | 663,548 | 252,096,681 | peaks | hg38 | WTC11 | Cell line | EFO:0009747 | Skin | ENCSR779QAB | 2 | 2_1 | CTCF | ChIA-PET | bed narrowPeak | 15,969,754 | 09/01/2021 | 08/22/2024 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=WTC11 genetically modified (insertion) using CRISPR;Lab=Charles Lee;System=integumental system;GM=[Method- CRISPR|Category- insertion];Submitted_track_name=LHW0005V.no_input_all_peaks.maxscore1000.narrowPeak.bb;Experiment_date_released=09/09/2021;File_analysis_title=Lab custom GRCh38;schema=BED6+4 | Integumentary | Unknown | ENCODE WTC11 (repl. 2) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR779QAB] [Life stage: Unknown] |
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