Browse FILER
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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
| #Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | life stage | trackName |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NGEN000020 | ENCODE | Download | 63,867 | 106,000,000,000 | long range chromatin interactions | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000BZW | 1 | 1_1 | POLR2A | ChIA-PET | bed bed12 | 2,040,457 | 9/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=Homo sapiens HeLa-S3;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=adult 31 years;Reference=NR;External_resources=GEO:GSM970211,UCSC-ENCODE-hg19:wgEncodeEH001426;Project=ENCODE;Award=R01HG004456;Experiment_date_released=2012-05-24;Submitted_track_name=wgEncodeGisChiaPetHelas3Pol2InteractionsRep1.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=reproductive system;EN | Reproductive | Adult | ENCODE HeLa-S3 (repl. 1) ChIA-PET POLR2A long range chromatin interactions (bed12) [Experiment: ENCSR000BZW] [Life stage: Adult] |
| NGEN000026 | ENCODE | Download | 4,318 | 1,736,183,127 | long range chromatin interactions | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BZZ | 1 | 1_1 | ESR1 | ChIA-PET | bed bed12 | 164,541 | 9/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=Homo sapiens MCF-7;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001429,GEO:GSM970212;Project=ENCODE;Award=R01HG004456;Experiment_date_released=2012-05-24;Submitted_track_name=wgEncodeGisChiaPetMcf7EraaInteractionsRep1.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,integumenta | Reproductive | Adult | ENCODE MCF-7 (repl. 1) ChIA-PET ESR1 long range chromatin interactions (bed12) [Experiment: ENCSR000BZZ] [Life stage: Adult] |
| NGEN000027 | ENCODE | Download | 5,498 | 2,320,670,350 | long range chromatin interactions | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BZZ | 2 | 2_1 | ESR1 | ChIA-PET | bed bed12 | 208,287 | 9/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=Homo sapiens MCF-7;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001429,GEO:GSM970212;Project=ENCODE;Award=R01HG004456;Experiment_date_released=2012-05-24;Submitted_track_name=wgEncodeGisChiaPetMcf7EraaInteractionsRep2.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,integumenta | Reproductive | Adult | ENCODE MCF-7 (repl. 2) ChIA-PET ESR1 long range chromatin interactions (bed12) [Experiment: ENCSR000BZZ] [Life stage: Adult] |
| NGEN000028 | ENCODE | Download | 2,433 | 1,698,620,256 | long range chromatin interactions | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000BZZ | 3 | 3_1 | ESR1 | ChIA-PET | bed bed12 | 92,117 | 9/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=Homo sapiens MCF-7;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001429,GEO:GSM970212;Project=ENCODE;Award=R01HG004456;Experiment_date_released=2012-05-24;Submitted_track_name=wgEncodeGisChiaPetMcf7EraaInteractionsRep3.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,integumental | Reproductive | Adult | ENCODE MCF-7 (repl. 3) ChIA-PET ESR1 long range chromatin interactions (bed12) [Experiment: ENCSR000BZZ] [Life stage: Adult] |
| NGEN000033 | ENCODE | Download | 11,832 | 15,721,374,097 | long range chromatin interactions | hg19 | NB4 | Cell line | EFO:0002798 | Blood | ENCSR000CAB | 1 | 1_1 | POLR2A | ChIA-PET | bed bed12 | 392,479 | 9/24/2011 | 02/19/2019 | Chromatin interactions | ChIA-PET long range chromatin interactions | Biosample_summary=Homo sapiens NB4;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=adult 23 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001431,GEO:GSM970214;Project=ENCODE;Award=R01HG004456;Experiment_date_released=2012-05-24;Submitted_track_name=wgEncodeGisChiaPetNb4Pol2InteractionsRep1.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=NB4;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=immune system,skeletal system;ENCODE_biosample_te | Cardiovascular | Adult | ENCODE NB4 (repl. 1) ChIA-PET POLR2A long range chromatin interactions (bed12) [Experiment: ENCSR000CAB] [Life stage: Adult] |
| NGEN036892 | ENCODE | Download | 51,241 | 44,543,252 | peaks | hg38 | CD8+ alpha-beta T cell | Primary cell | NTR:0000666 | Blood | ENCSR217TFN | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 782,707 | 7/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 21 years;Reference=NR;External_resources=GEO:GSE187092;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0072H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=ac | Cardiovascular | Adult | ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR217TFN] [Life stage: Adult] |
| NGEN036893 | ENCODE | Download | 48,188 | 41,613,025 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000499 | Blood | ENCSR154MAJ | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 764,111 | 7/20/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187130;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0093V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=activated CD4-positive, alp | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR154MAJ] [Life stage: Adult] |
| NGEN036894 | ENCODE | Download | 28,343 | 36,611,297 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR789ZIJ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 444,933 | 10/15/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens HepG2;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=PMID:28358394;External_resources=GEO:GSE177731;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2020-12-18,2020-09-28;Submitted_track_name=LHH0021N.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_bios | Digestive | Child | ENCODE HepG2 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR789ZIJ] [Life stage: Child] |
| NGEN036895 | ENCODE | Download | 34,492 | 25,195,847 | peaks | hg38 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR676KCF | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 525,496 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens HEK293T;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=PMID:28358394;External_resources=GEO:GSE177741;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-25,2020-09-28;Submitted_track_name=LHH0084H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HEK293T;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom GRCh | Renal | Embryonic | ENCODE HEK293T (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR676KCF] [Life stage: Embryonic] |
| NGEN036896 | ENCODE | Download | 43,339 | 27,876,258 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000896 | Blood | ENCSR093CTT | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 672,569 | 7/15/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187306;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0042H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD4-positive, alpha-beta | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR093CTT] [Life stage: Adult] |
| NGEN036897 | ENCODE | Download | 49,416 | 44,776,439 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR448ZLA | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 783,787 | 7/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187833;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0057H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_sy | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR448ZLA] [Life stage: Adult] |
| NGEN036898 | ENCODE | Download | 29,381 | 23,937,348 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR880DSH | 3 | 3_1 | POLR2A | ChIA-PET | bed broadPeak | 442,126 | 2/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens K562;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=PMID:28358394;External_resources=GEO:GSE178015;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-02-26,2020-09-28;Submitted_track_name=LHK0012V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-56 | Cardiovascular | Adult | ENCODE K562 (repl. 3) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR880DSH] [Life stage: Adult] |
| NGEN036899 | ENCODE | Download | 66,968 | 53,256,388 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000665 | Blood | ENCSR291RCO | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 1,045,590 | 7/21/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187368;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-08-02;Submitted_track_name=LHT0048H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR291RCO] [Life stage: Adult] |
| NGEN036900 | ENCODE | Download | 42,940 | 38,689,183 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR448ZLA | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 659,740 | 7/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187833;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0073H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_s | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR448ZLA] [Life stage: Adult] |
| NGEN036901 | ENCODE | Download | 73,116 | 63,122,252 | peaks | hg38 | Naive thymus-derived CD4+, alpha-beta T cell | Primary cell | CL:0000895 | Blood | ENCSR763OCG | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,092,805 | 7/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187856;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0063H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=naive thymus-derived CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyt | Cardiovascular | Adult | ENCODE Naive thymus-derived CD4+, alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR763OCG] [Life stage: Adult] |
| NGEN036902 | ENCODE | Download | 60,133 | 58,106,153 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000498 | Blood | ENCSR569TBN | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 941,213 | 7/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187735;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0078H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD4-positive, alpha-beta memory T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR569TBN] [Life stage: Adult] |
| NGEN036903 | ENCODE | Download | 24,649 | 13,888,556 | peaks | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR095SXC | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 389,923 | 8/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens H1;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=4DN:4DNESR9S8R38,GEO:GSE242609;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-09-09;Submitted_track_name=LHES0002H1H2E2H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=Lab custom GRCh38;GM=NR;S | Embryo | Embryonic | ENCODE H1-hESC (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR095SXC] [Life stage: Embryonic] |
| NGEN036904 | ENCODE | Download | 65,672 | 55,264,394 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000896 | Blood | ENCSR314TNQ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 985,700 | 7/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187483;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0058H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD4-positive, alpha-beta | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR314TNQ] [Life stage: Adult] |
| NGEN036905 | ENCODE | Download | 40,061 | 29,287,763 | peaks | hg38 | CD8+ T cell | Primary cell | CL:0000625 | Blood | ENCSR180GEY | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 627,644 | 7/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 21 years;Reference=NR;External_resources=GEO:GSE187220;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-08-02;Submitted_track_name=LHT0043H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD8-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,CD8+ T cell,leukocyte,hematopoietic cell;ENCODE_sy | Cardiovascular | Adult | ENCODE CD8+ T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR180GEY] [Life stage: Adult] |
| NGEN036906 | ENCODE | Download | 73,830 | 65,665,853 | peaks | hg38 | CD8+ alpha-beta naive T cell | Primary cell | NTR:0000667 | Blood | ENCSR114QCL | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,115,296 | 7/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated naive CD8-positive, alpha-beta T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE187036;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0091V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_n | Cardiovascular | Adult | ENCODE CD8+ alpha-beta naive T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR114QCL] [Life stage: Adult] |
| NGEN036907 | ENCODE | Download | 63,643 | 49,563,216 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000664 | Blood | ENCSR550JJT | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 965,016 | 7/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187672;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0070H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_ | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR550JJT] [Life stage: Adult] |
| NGEN036908 | ENCODE | Download | 123,479 | 107,897,263 | peaks | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR278IZK | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 1,942,593 | 3/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens HCT116;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE176973;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06;Submitted_track_name=LHH0127V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT-116 cell,HCT116 cell;Analys | Digestive | Adult | ENCODE HCT116 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR278IZK] [Life stage: Adult] |
| NGEN036909 | ENCODE | Download | 64,394 | 61,068,290 | peaks | hg38 | CD8+ alpha-beta memory cell | Primary cell | NTR:0000504 | Blood | ENCSR041UPG | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 958,843 | 7/27/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE187167;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0087V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD8-positive, alph | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR041UPG] [Life stage: Adult] |
| NGEN036910 | ENCODE | Download | 22,163 | 12,491,598 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | NTR:0000663 | Blood | ENCSR962FFY | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 337,828 | 7/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187786;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0035H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=ac | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR962FFY] [Life stage: Adult] |
| NGEN036911 | ENCODE | Download | 46,302 | 33,139,011 | peaks | hg38 | CD8+ alpha-beta T cell | Primary cell | CL:0000906 | Blood | ENCSR408MRB | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 729,499 | 7/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 21 years;Reference=NR;External_resources=GEO:GSE187506;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0044H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD8-positive, alpha-beta | Cardiovascular | Adult | ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR408MRB] [Life stage: Adult] |
| NGEN036912 | ENCODE | Download | 25,082 | 14,323,145 | peaks | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR095SXC | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 403,624 | 8/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens H1;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=4DN:4DNESR9S8R38,GEO:GSE242609;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-09-09;Submitted_track_name=LHES0003H1H2E3H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=Lab custom GRCh38;GM=NR;Sc | Embryo | Embryonic | ENCODE H1-hESC (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR095SXC] [Life stage: Embryonic] |
| NGEN036913 | ENCODE | Download | 103,156 | 78,619,964 | peaks | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR035PVZ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 1,549,264 | 4/1/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens HCT116;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE176721;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06;Submitted_track_name=LHH0128V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT-116 cell,HCT116 cell;Analys | Digestive | Adult | ENCODE HCT116 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR035PVZ] [Life stage: Adult] |
| NGEN036914 | ENCODE | Download | 68,425 | 60,673,045 | peaks | hg38 | CD8+ alpha-beta memory cell | Primary cell | CL:0000909 | Blood | ENCSR149TQU | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,011,443 | 7/26/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE187123;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0086V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD8-positive, alpha-beta memory T cell;ENCODE_cell_slims=T cell,CD8+ T cell,leukocyte,hematopoietic | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR149TQU] [Life stage: Adult] |
| NGEN036915 | ENCODE | Download | 43,425 | 28,175,621 | peaks | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR905HWW | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 630,237 | 8/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens GM12878;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=4DN:4DNESZ25MOZV;Project=community;Award=1U54DK107967;Experiment_date_released=2021-09-09,2020-09-28;Submitted_track_name=LHG0045V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=La | Cardiovascular | Adult | ENCODE GM12878 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR905HWW] [Life stage: Adult] |
| NGEN036916 | ENCODE | Download | 55,562 | 46,289,006 | peaks | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR905HWW | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 814,487 | 8/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens GM12878;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=4DN:4DNESZ25MOZV;Project=community;Award=1U54DK107967;Experiment_date_released=2021-09-09,2020-09-28;Submitted_track_name=LHG0035N_0035V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_t | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR905HWW] [Life stage: Adult] |
| NGEN036917 | ENCODE | Download | 28,451 | 28,036,631 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR597AKG | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 473,877 | 10/16/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens K562;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=PMID:28358394;External_resources=GEO:GSE177471;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-03-12,2020-09-28;Submitted_track_name=LHK0002N.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-56 | Cardiovascular | Adult | ENCODE K562 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR597AKG] [Life stage: Adult] |
| NGEN036918 | ENCODE | Download | 50,295 | 35,766,014 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR345UIQ | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 768,621 | 7/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187222;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0038N.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_s | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR345UIQ] [Life stage: Adult] |
| NGEN036919 | ENCODE | Download | 64,128 | 54,351,018 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000896 | Blood | ENCSR314TNQ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 941,486 | 7/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187483;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0040N.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=activated CD4-positive, alpha-beta | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR314TNQ] [Life stage: Adult] |
| NGEN036920 | ENCODE | Download | 54,636 | 38,638,646 | peaks | hg38 | CD8+ alpha-beta T cell | Primary cell | NTR:0000666 | Blood | ENCSR531UMR | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 863,779 | 7/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 21 years;Reference=NR;External_resources=GEO:GSE187575;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0045H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=ac | Cardiovascular | Adult | ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR531UMR] [Life stage: Adult] |
| NGEN036921 | ENCODE | Download | 36,719 | 35,099,632 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR411IVB | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 593,837 | 10/10/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens HepG2;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=PMID:28358394;External_resources=GEO:GSE177153;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-03-12,2020-09-28;Submitted_track_name=LHH0022N.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_bio | Digestive | Child | ENCODE HepG2 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR411IVB] [Life stage: Child] |
| NGEN036922 | ENCODE | Download | 65,073 | 56,625,638 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000497 | Blood | ENCSR402NAQ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 997,511 | 7/18/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187498;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0064H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated naive CD4-positive, | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR402NAQ] [Life stage: Adult] |
| NGEN036923 | ENCODE | Download | 49,793 | 45,801,642 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR404FPI | 3 | 3_1 | CTCF | ChIA-PET | bed broadPeak | 820,002 | 6/29/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE177081;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06,2020-09-28;Submitted_track_name=LHH0142V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=reproducti | Embryo | Newborn | ENCODE Endothelial cell (repl. 3) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR404FPI] [Life stage: Newborn] |
| NGEN036924 | ENCODE | Download | 47,567 | 42,998,985 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR404FPI | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 764,764 | 3/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE177081;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06,2020-09-28;Submitted_track_name=LHH0129V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=reproducti | Embryo | Newborn | ENCODE Endothelial cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR404FPI] [Life stage: Newborn] |
| NGEN036925 | ENCODE | Download | 31,520 | 26,602,453 | peaks | hg38 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR773XVD | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 483,337 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens HEK293T;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=PMID:28358394;External_resources=GEO:GSE177679;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2020-12-16,2020-09-28;Submitted_track_name=LHH0083H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HEK293T;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom GRCh | Renal | Embryonic | ENCODE HEK293T (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR773XVD] [Life stage: Embryonic] |
| NGEN036926 | ENCODE | Download | 60,163 | 46,391,683 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | NTR:0000663 | Blood | ENCSR733XLQ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 870,080 | 7/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187994;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0076H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=a | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR733XLQ] [Life stage: Adult] |
| NGEN036927 | ENCODE | Download | 26,768 | 19,280,861 | peaks | hg38 | MCF 10A | Cell line | EFO:0001200 | Female Reproductive | ENCSR403ZYJ | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 416,404 | 10/20/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens MCF 10A;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 36 years;Reference=PMID:28358394;External_resources=GEO:GSE177079;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-25,2020-09-28;Submitted_track_name=LHM0007H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF 10A;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=exocrine system,integumental system;ENCODE_biosample_term_synonyms=N | Reproductive | Adult | ENCODE MCF 10A (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR403ZYJ] [Life stage: Adult] |
| NGEN036928 | ENCODE | Download | 46,168 | 33,743,325 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | NTR:0000663 | Blood | ENCSR962FFY | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 688,297 | 7/16/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187786;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0039H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=a | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR962FFY] [Life stage: Adult] |
| NGEN036929 | ENCODE | Download | 28,828 | 27,846,208 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR597AKG | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 482,755 | 10/16/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens K562;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=PMID:28358394;External_resources=GEO:GSE177471;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-03-12,2020-09-28;Submitted_track_name=LHK0001N.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562 | Cardiovascular | Adult | ENCODE K562 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR597AKG] [Life stage: Adult] |
| NGEN036930 | ENCODE | Download | 18,969 | 12,780,419 | peaks | hg38 | A549 | Cell line | EFO:0001086 | Lung | ENCSR911ZMB | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 305,298 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens A549;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=PMID:28358394;External_resources=GEO:GSE177818;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-25,2020-09-28;Submitted_track_name=LHA0006H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_titl | Respiratory | Adult | ENCODE A549 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR911ZMB] [Life stage: Adult] |
| NGEN036931 | ENCODE | Download | 34,617 | 28,035,679 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR080OMN | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 498,804 | 3/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE176955;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06,2020-09-28;Submitted_track_name=LHH0131V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=reproducti | Embryo | Newborn | ENCODE Endothelial cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR080OMN] [Life stage: Newborn] |
| NGEN036932 | ENCODE | Download | 55,607 | 42,924,100 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000498 | Blood | ENCSR106INW | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 853,653 | 7/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187353;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0046H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=CD4-positive, alpha-beta memory T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR106INW] [Life stage: Adult] |
| NGEN036933 | ENCODE | Download | 58,692 | 48,924,469 | peaks | hg38 | CD8+ alpha-beta memory T cell | Primary cell | NTR:0000669 | Blood | ENCSR114KEO | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 834,255 | 7/27/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE187034;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0088_88V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_te | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR114KEO] [Life stage: Adult] |
| NGEN036934 | ENCODE | Download | 32,662 | 27,466,426 | peaks | hg38 | A549 | Cell line | EFO:0001086 | Lung | ENCSR138NSW | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 495,907 | 1/12/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens A549;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE176752;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-12,2020-09-28;Submitted_track_name=LHA0027V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_title=Lab custo | Respiratory | Adult | ENCODE A549 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR138NSW] [Life stage: Adult] |
| NGEN036935 | ENCODE | Download | 58,446 | 44,937,475 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | NTR:0000663 | Blood | ENCSR733XLQ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 850,802 | 7/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187994;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0075H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=ac | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR733XLQ] [Life stage: Adult] |
| NGEN036936 | ENCODE | Download | 28,585 | 21,685,354 | peaks | hg38 | MCF 10A | Cell line | EFO:0001200 | Female Reproductive | ENCSR403ZYJ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 454,496 | 10/20/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens MCF 10A;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 36 years;Reference=PMID:28358394;External_resources=GEO:GSE177079;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-25,2020-09-28;Submitted_track_name=LHM0010H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=MCF 10A;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=exocrine system,integumental system;ENCODE_biosample_term_synonyms=NR | Reproductive | Adult | ENCODE MCF 10A (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR403ZYJ] [Life stage: Adult] |
| NGEN036937 | ENCODE | Download | 24,683 | 17,215,728 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR404FPI | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 410,960 | 6/29/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE177081;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06,2020-09-28;Submitted_track_name=LHH0089V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=reproductiv | Embryo | Newborn | ENCODE Endothelial cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR404FPI] [Life stage: Newborn] |
| NGEN036938 | ENCODE | Download | 70,144 | 66,531,073 | peaks | hg38 | Naive thymus-derived CD8+, alpha-beta T cell | Primary cell | CL:0000900 | Blood | ENCSR064OTE | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,055,720 | 7/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens naive thymus-derived CD8-positive, alpha-beta T cell male adult (30 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE187252;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0090V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=naive thymus-derived CD8-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,CD8+ T c | Cardiovascular | Adult | ENCODE Naive thymus-derived CD8+, alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR064OTE] [Life stage: Adult] |
| NGEN036939 | ENCODE | Download | 48,527 | 48,808,330 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR857MYZ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 748,750 | 12/17/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens HepG2;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE177967;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2020-12-30,2020-09-28;Submitted_track_name=LHH0124_124V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_biosample_t | Digestive | Child | ENCODE HepG2 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR857MYZ] [Life stage: Child] |
| NGEN036940 | ENCODE | Download | 54,365 | 40,357,463 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000664 | Blood | ENCSR550JJT | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 836,748 | 7/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187672;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0051H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_n | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR550JJT] [Life stage: Adult] |
| NGEN036941 | ENCODE | Download | 50,785 | 41,533,436 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000664 | Blood | ENCSR446MTI | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 735,447 | 7/18/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187788;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0097_97V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_te | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR446MTI] [Life stage: Adult] |
| NGEN036942 | ENCODE | Download | 34,139 | 24,274,761 | peaks | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR782EKZ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 486,107 | 8/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens H1;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=4DN:4DNESNYUGLUN,GEO:GSE242604;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-09-09;Submitted_track_name=LHES0006N.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=Lab custom GRCh38;GM=NR;Schema= | Embryo | Embryonic | ENCODE H1-hESC (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR782EKZ] [Life stage: Embryonic] |
| NGEN036943 | ENCODE | Download | 72,052 | 66,092,291 | peaks | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR278IZK | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 1,128,267 | 3/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens HCT116;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE176973;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06;Submitted_track_name=LHH0118V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT-116 cell,HCT116 cell;Analy | Digestive | Adult | ENCODE HCT116 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR278IZK] [Life stage: Adult] |
| NGEN036944 | ENCODE | Download | 46,772 | 32,234,121 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000497 | Blood | ENCSR731OFF | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 661,466 | 7/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187991;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0069H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=activated naive CD4-positive | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR731OFF] [Life stage: Adult] |
| NGEN036945 | ENCODE | Download | 44,788 | 33,552,986 | peaks | hg38 | CD8+ alpha-beta memory T cell | Primary cell | NTR:0000669 | Blood | ENCSR378IUJ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 705,644 | 7/27/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE187362;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0085V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_ | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR378IUJ] [Life stage: Adult] |
| NGEN036946 | ENCODE | Download | 33,389 | 25,239,846 | peaks | hg38 | CD8+ alpha-beta memory cell | Primary cell | CL:0000909 | Blood | ENCSR187PXW | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 529,430 | 7/26/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens CD8-positive, alpha-beta memory T cell male adult (30 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE187253;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0083V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD8-positive, alpha-beta memory T cell;ENCODE_cell_slims=T cell,CD8+ T cell,leukocyte,hematopoietic | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR187PXW] [Life stage: Adult] |
| NGEN036947 | ENCODE | Download | 22,766 | 15,907,228 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR345UIQ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 368,780 | 7/13/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187222;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0036H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_sy | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR345UIQ] [Life stage: Adult] |
| NGEN036948 | ENCODE | Download | 33,822 | 26,894,403 | peaks | hg38 | Naive thymus-derived CD4+, alpha-beta T cell | Primary cell | CL:0000895 | Blood | ENCSR763OCG | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 504,333 | 7/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187856;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0095V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=naive thymus-derived CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocy | Cardiovascular | Adult | ENCODE Naive thymus-derived CD4+, alpha-beta T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR763OCG] [Life stage: Adult] |
| NGEN036949 | ENCODE | Download | 24,144 | 20,761,867 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR411IVB | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 387,598 | 10/15/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens HepG2;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=PMID:28358394;External_resources=GEO:GSE177153;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-03-12,2020-09-28;Submitted_track_name=LHH0038H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_bios | Digestive | Child | ENCODE HepG2 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR411IVB] [Life stage: Child] |
| NGEN036950 | ENCODE | Download | 29,801 | 20,009,261 | peaks | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR184YZV | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 473,169 | 12/31/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens GM12878;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=4DN:4DNES7IB5LY9;Project=community;Award=1U54DK107967;Experiment_date_released=2021-09-09,2020-09-28;Submitted_track_name=LHG0052H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=La | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR184YZV] [Life stage: Adult] |
| NGEN036951 | ENCODE | Download | 60,917 | 48,578,015 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000499 | Blood | ENCSR154MAJ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 951,109 | 7/20/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187130;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0047H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD4-positive, alph | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR154MAJ] [Life stage: Adult] |
| NGEN036952 | ENCODE | Download | 55,494 | 47,880,739 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000499 | Blood | ENCSR877ZRR | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 849,932 | 7/20/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187864;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0077H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD4-positive, alph | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR877ZRR] [Life stage: Adult] |
| NGEN036953 | ENCODE | Download | 27,926 | 25,246,855 | peaks | hg38 | A549 | Cell line | EFO:0001086 | Lung | ENCSR138NSW | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 421,144 | 1/12/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens A549;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE176752;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-12,2020-09-28;Submitted_track_name=LHA0026V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_title=Lab cust | Respiratory | Adult | ENCODE A549 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR138NSW] [Life stage: Adult] |
| NGEN036954 | ENCODE | Download | 45,615 | 33,716,960 | peaks | hg38 | CD8+ alpha-beta T cell | Primary cell | CL:0000906 | Blood | ENCSR982KEM | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 689,224 | 7/24/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 21 years;Reference=NR;External_resources=GEO:GSE187935;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0071H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD8-positive, alpha-beta | Cardiovascular | Adult | ENCODE CD8+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR982KEM] [Life stage: Adult] |
| NGEN036955 | ENCODE | Download | 31,049 | 20,569,097 | peaks | hg38 | CD8+ T cell | Primary cell | CL:0000625 | Blood | ENCSR180GEY | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 482,965 | 7/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 21 years;Reference=NR;External_resources=GEO:GSE187220;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-08-02;Submitted_track_name=LHT0067H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=CD8-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,CD8+ T cell,leukocyte,hematopoietic cell;ENCODE_s | Cardiovascular | Adult | ENCODE CD8+ T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR180GEY] [Life stage: Adult] |
| NGEN036956 | ENCODE | Download | 22,600 | 15,650,012 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR345UIQ | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 362,709 | 7/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187222;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0036V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_sy | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR345UIQ] [Life stage: Adult] |
| NGEN036957 | ENCODE | Download | 32,240 | 25,060,934 | peaks | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR080OMN | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 469,515 | 3/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE176955;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06,2020-09-28;Submitted_track_name=LHH0130V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=reproductiv | Embryo | Newborn | ENCODE Endothelial cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR080OMN] [Life stage: Newborn] |
| NGEN036958 | ENCODE | Download | 51,429 | 46,244,534 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000624 | Blood | ENCSR448ZLA | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 815,933 | 7/14/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187833;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0057V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_sy | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR448ZLA] [Life stage: Adult] |
| NGEN036959 | ENCODE | Download | 59,706 | 43,399,705 | peaks | hg38 | Naive thymus-derived CD4+, alpha-beta T cell | Primary cell | CL:0000895 | Blood | ENCSR120LMS | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 890,781 | 7/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell male adult (43 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187058;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0049H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=naive thymus-derived CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyt | Cardiovascular | Adult | ENCODE Naive thymus-derived CD4+, alpha-beta T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR120LMS] [Life stage: Adult] |
| NGEN036960 | ENCODE | Download | 54,970 | 42,256,844 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000498 | Blood | ENCSR106INW | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 862,530 | 7/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens CD4-positive, alpha-beta memory T cell male adult (43 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187353;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0092V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD4-positive, alpha-beta memory T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR106INW] [Life stage: Adult] |
| NGEN036961 | ENCODE | Download | 28,828 | 19,810,962 | peaks | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR782EKZ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 427,189 | 8/31/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens H1;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=4DN:4DNESNYUGLUN,GEO:GSE242604;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-09-09;Submitted_track_name=LHES0007H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=Lab custom GRCh38;GM=NR;Schema=b | Embryo | Embryonic | ENCODE H1-hESC (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR782EKZ] [Life stage: Embryonic] |
| NGEN036962 | ENCODE | Download | 66,383 | 58,593,350 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000664 | Blood | ENCSR446MTI | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,017,037 | 7/19/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187788;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0065H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_n | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR446MTI] [Life stage: Adult] |
| NGEN036963 | ENCODE | Download | 60,310 | 54,109,552 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000665 | Blood | ENCSR159PXF | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 942,739 | 7/21/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187135;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0079H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_ | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR159PXF] [Life stage: Adult] |
| NGEN036964 | ENCODE | Download | 59,341 | 51,874,539 | peaks | hg38 | CD4+ alpha-beta memory T cell | Primary cell | NTR:0000665 | Blood | ENCSR291RCO | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 937,815 | 7/21/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta memory T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187368;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-08-02;Submitted_track_name=LHT0094V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_ | Cardiovascular | Adult | ENCODE CD4+ alpha-beta memory T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR291RCO] [Life stage: Adult] |
| NGEN036965 | ENCODE | Download | 102,798 | 63,058,596 | peaks | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR035PVZ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 1,508,972 | 4/1/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens HCT116;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE176721;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-04-06;Submitted_track_name=LHH0098V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT-116 cell,HCT116 cell;Analy | Digestive | Adult | ENCODE HCT116 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR035PVZ] [Life stage: Adult] |
| NGEN036966 | ENCODE | Download | 46,963 | 51,048,001 | peaks | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR857MYZ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 730,278 | 10/16/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens HepG2;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE177967;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2020-12-30,2020-09-28;Submitted_track_name=LHH0123V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_biosample_term | Digestive | Child | ENCODE HepG2 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR857MYZ] [Life stage: Child] |
| NGEN036967 | ENCODE | Download | 30,274 | 23,746,147 | peaks | hg38 | MCF 10A | Cell line | EFO:0001200 | Female Reproductive | ENCSR499JGQ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 467,110 | 10/20/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens MCF 10A;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 36 years;Reference=PMID:28358394;External_resources=GEO:GSE177444;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2020-12-16,2020-09-28;Submitted_track_name=LHM0012H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=MCF 10A;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=exocrine system,integumental system;ENCODE_biosample_term_synonyms=NR | Reproductive | Adult | ENCODE MCF 10A (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR499JGQ] [Life stage: Adult] |
| NGEN036968 | ENCODE | Download | 34,532 | 29,271,887 | peaks | hg38 | MCF 10A | Cell line | EFO:0001200 | Female Reproductive | ENCSR499JGQ | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 535,629 | 10/20/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens MCF 10A;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 36 years;Reference=PMID:28358394;External_resources=GEO:GSE177444;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2020-12-16,2020-09-28;Submitted_track_name=LHM0008H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF 10A;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=exocrine system,integumental system;ENCODE_biosample_term_synonyms=N | Reproductive | Adult | ENCODE MCF 10A (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR499JGQ] [Life stage: Adult] |
| NGEN036969 | ENCODE | Download | 52,712 | 39,380,390 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000497 | Blood | ENCSR731OFF | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 811,376 | 7/17/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187991;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0050H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated naive CD4-positive, | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR731OFF] [Life stage: Adult] |
| NGEN036970 | ENCODE | Download | 32,545 | 30,115,089 | peaks | hg38 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR773XVD | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 499,934 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens HEK293T;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=PMID:28358394;External_resources=GEO:GSE177679;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2020-12-16,2020-09-28;Submitted_track_name=LHH0085V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HEK293T;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom GRC | Renal | Embryonic | ENCODE HEK293T (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR773XVD] [Life stage: Embryonic] |
| NGEN036971 | ENCODE | Download | 31,503 | 26,014,302 | peaks | hg38 | CD8+ alpha-beta memory cell | Primary cell | NTR:0000504 | Blood | ENCSR697ZHG | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 494,912 | 7/27/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD8-positive, alpha-beta memory T cell male adult (30 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE187691;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0084V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated CD8-positive, alph | Cardiovascular | Adult | ENCODE CD8+ alpha-beta memory cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR697ZHG] [Life stage: Adult] |
| NGEN036972 | ENCODE | Download | 18,082 | 11,932,192 | peaks | hg38 | A549 | Cell line | EFO:0001086 | Lung | ENCSR911ZMB | 1 | 1_1 | CTCF | ChIA-PET | bed broadPeak | 280,574 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens A549;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 58 years;Reference=PMID:28358394;External_resources=GEO:GSE177818;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-25,2020-09-28;Submitted_track_name=LHA0005H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A549 cell,A-549;Analysis_tit | Respiratory | Adult | ENCODE A549 (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR911ZMB] [Life stage: Adult] |
| NGEN036973 | ENCODE | Download | 40,986 | 29,857,334 | peaks | hg38 | CD4+ alpha-beta T cell | Primary cell | CL:0000896 | Blood | ENCSR093CTT | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 639,925 | 7/15/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 20 years;Reference=NR;External_resources=GEO:GSE187306;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0074H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=activated CD4-positive, alpha-beta | Cardiovascular | Adult | ENCODE CD4+ alpha-beta T cell (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR093CTT] [Life stage: Adult] |
| NGEN036974 | ENCODE | Download | 31,686 | 23,098,719 | peaks | hg38 | HEK293T | Cell line | EFO:0001184 | Kidney | ENCSR676KCF | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 483,977 | 10/21/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens HEK293T;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=PMID:28358394;External_resources=GEO:GSE177741;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-25,2020-09-28;Submitted_track_name=LHH0086V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HEK293T;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom GRC | Renal | Embryonic | ENCODE HEK293T (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR676KCF] [Life stage: Embryonic] |
| NGEN036975 | ENCODE | Download | 36,390 | 27,947,066 | peaks | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR184YZV | 2 | 2_1 | CTCF | ChIA-PET | bed broadPeak | 535,221 | 8/26/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens GM12878;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=4DN:4DNES7IB5LY9;Project=community;Award=1U54DK107967;Experiment_date_released=2021-09-09,2020-09-28;Submitted_track_name=LHG0066V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=L | Cardiovascular | Adult | ENCODE GM12878 (repl. 2) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR184YZV] [Life stage: Adult] |
| NGEN036976 | ENCODE | Download | 14,083 | 8,375,078 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR880DSH | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 213,872 | 10/16/2020 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens K562;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=PMID:28358394;External_resources=GEO:GSE178015;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-02-26,2020-09-28;Submitted_track_name=LHK0009H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562 | Cardiovascular | Adult | ENCODE K562 (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR880DSH] [Life stage: Adult] |
| NGEN036977 | ENCODE | Download | 28,283 | 22,923,833 | peaks | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR880DSH | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 416,866 | 2/25/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens K562;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=PMID:28358394;External_resources=GEO:GSE178015;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-02-26,2020-09-28;Submitted_track_name=LHK0011V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-56 | Cardiovascular | Adult | ENCODE K562 (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR880DSH] [Life stage: Adult] |
| NGEN036978 | ENCODE | Download | 33,159 | 26,810,936 | peaks | hg38 | CD8+ T cell | Primary cell | CL:0000625 | Blood | ENCSR185VQH | 1 | 1_1 | POLR2A | ChIA-PET | bed broadPeak | 517,872 | 7/23/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years);Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 21 years;Reference=NR;External_resources=GEO:GSE187245;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-10-06;Submitted_track_name=LHT0066H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=CD8-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,CD8+ T cell,leukocyte,hematopoietic cell;ENCODE_sy | Cardiovascular | Adult | ENCODE CD8+ T cell (repl. 1) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR185VQH] [Life stage: Adult] |
| NGEN036979 | ENCODE | Download | 40,553 | 26,778,552 | peaks | hg38 | CD4+ alpha-beta naive T cell | Primary cell | NTR:0000497 | Blood | ENCSR402NAQ | 2 | 2_1 | POLR2A | ChIA-PET | bed broadPeak | 554,112 | 7/18/2021 | 11/07/2022 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads for 36 hours;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187498;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0096_96V.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=activated naive CD4-posit | Cardiovascular | Adult | ENCODE CD4+ alpha-beta naive T cell (repl. 2) ChIA-PET POLR2A peaks (broadPeak) [Experiment: ENCSR402NAQ] [Life stage: Adult] |
| NGEN036980 | ENCODE | Download | 383,714 | 161,679,621 | peaks | hg38 | HEK293 | Cell line | EFO:0001182 | Kidney | ENCSR934CYB | 2 | 2_1 | POLR2A | ChIA-PET | bed narrowPeak | 9,641,450 | 10/9/2020 | 08/22/2024 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens HEK293;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=PMID:28358394;External_resources=GEO:GSE177874;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2020-12-16;Submitted_track_name=LHH0087V.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HEK293;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=human embryonic kidney cell;Anal | Renal | Embryonic | ENCODE HEK293 (repl. 2) ChIA-PET POLR2A peaks (narrowPeak) [Experiment: ENCSR934CYB] [Life stage: Embryonic] |
| NGEN036981 | ENCODE | Download | 569,730 | 224,283,686 | peaks | hg38 | SK-N-SH | Cell line | EFO:0003072 | Brain | ENCSR514HBO | 2 | 2_1 | CTCF | ChIA-PET | bed narrowPeak | 13,459,245 | 10/8/2020 | 08/22/2024 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens SK-N-SH;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=child 4 years;Reference=NR;External_resources=GEO:GSE177127;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-25;Submitted_track_name=LHS0003H.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Ana | Nervous | Child | ENCODE SK-N-SH (repl. 2) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR514HBO] [Life stage: Child] |
| NGEN036982 | ENCODE | Download | 394,237 | 128,926,832 | peaks | hg38 | BJ | Cell line | EFO:0002779 | Connective Tissue | ENCSR956IXE | 1 | 1_1 | POLR2A | ChIA-PET | bed narrowPeak | 10,176,713 | 9/22/2021 | 08/22/2024 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens BJ;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE188185;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-09-23;Submitted_track_name=LHB0010.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=BJ;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom G | Skeletal | Newborn | ENCODE BJ (repl. 1) ChIA-PET POLR2A peaks (narrowPeak) [Experiment: ENCSR956IXE] [Life stage: Newborn] |
| NGEN036983 | ENCODE | Download | 266,095 | 116,336,830 | peaks | hg38 | AG04450 | Cell line | EFO:0006270 | Lung | ENCSR514BNX | 2 | 2_1 | POLR2A | ChIA-PET | bed narrowPeak | 6,958,717 | 10/10/2020 | 08/22/2024 | Chromatin interactions | ChIA-PET peaks | Biosample_summary=Homo sapiens AG04450;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=embryonic 12 weeks;Reference=NR;External_resources=GEO:GSE177120;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-02-23;Submitted_track_name=LHA0017V.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=AG04450;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=NR;An | Respiratory | Embryonic | ENCODE AG04450 (repl. 2) ChIA-PET POLR2A peaks (narrowPeak) [Experiment: ENCSR514BNX] [Life stage: Embryonic] |
| NGEN036984 | ENCODE | Download | 533,453 | 212,743,354 | peaks | hg38 | Common myeloid progenitor cell | Primary cell | CL:0001059 | Blood | ENCSR421NGZ | 1 | 1_1 | CTCF | ChIA-PET | bed narrowPeak | 13,368,719 | 7/29/2021 | 08/22/2024 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens common myeloid progenitor, CD34-positive;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE187570;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-08-02;Submitted_track_name=LHHSC0001H.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=common myeloid progenitor, CD34-positive;ENCODE_cell_slims=myeloid cell,hematopoietic cell,progenitor cell;ENCODE_sy | Cardiovascular | Unknown | ENCODE Common myeloid progenitor cell (repl. 1) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR421NGZ] [Life stage: Unknown] |
| NGEN036985 | ENCODE | Download | 440,366 | 190,496,509 | peaks | hg38 | AG04449 | Cell line | CLO:0034837 | Skin | ENCSR580MNR | 2 | 2_1 | CTCF | ChIA-PET | bed narrowPeak | 11,182,061 | 10/9/2020 | 08/22/2024 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens AG04449;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=embryonic 12 weeks;Reference=PMID:28358394;External_resources=GEO:GSE177418;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-01-25;Submitted_track_name=LHA0011H.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=AG04449;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=AG04449;Analysis | Integumentary | Embryonic | ENCODE AG04449 (repl. 2) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR580MNR] [Life stage: Embryonic] |
| NGEN036986 | ENCODE | Download | 663,548 | 252,096,681 | peaks | hg38 | WTC11 | Cell line | EFO:0009747 | Skin | ENCSR779QAB | 2 | 2_1 | CTCF | ChIA-PET | bed narrowPeak | 15,969,754 | 9/1/2021 | 08/22/2024 | Chromatin interactions | ChIA-PET CTCF peaks | Biosample_summary=Homo sapiens WTC11 genetically modified (insertion) using CRISPR;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=adult 30 years;Reference=NR;External_resources=4DN:4DNES8MZ76GP,GEO:GSE242596;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2021-09-09;Submitted_track_name=LHW0005V.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=WTC11;ENCODE_cell_slims=fibroblast,induced pluripotent stem cell,stem cell, | Integumentary | Adult | ENCODE WTC11 (repl. 2) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR779QAB] [Life stage: Adult] |
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