Browse FILER
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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
| Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | life stage | trackName |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NGENCPZBNCLLGU | ENCODE | Download | 518 | 22,427,079 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYA | 1 | 1_1 | CELF1 | RIP-chip | bed broadPeak | 18,798 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001213,GEO:GSM787549;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStGm12878Celf1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune sy | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip CELF1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYA] [Life stage: Adult] |
| NGENCBHF6NRA23 | ENCODE | Download | 6,425 | 300,698,471 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYB | 1 | 1_1 | ELAVL1 | RIP-chip | bed broadPeak | 236,672 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001214,GEO:GSM787543;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStGm12878Elavl1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune s | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip ELAVL1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYB] [Life stage: Adult] |
| NGENCH5Z322P62 | ENCODE | Download | 2,673 | 104,568,832 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYC | 1 | 1_1 | IGF2BP1 | RIP-chip | bed broadPeak | 97,092 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001215,GEO:GSM787555;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStGm12878Igf2bp1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip IGF2BP1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYC] [Life stage: Adult] |
| NGENCLXDKKZJQX | ENCODE | Download | 6,499 | 360,848,193 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYD | 1 | 1_1 | PABPC1 | RIP-chip | bed broadPeak | 241,563 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001216,GEO:GSM787546;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStGm12878Pabpc1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune s | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip PABPC1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYD] [Life stage: Adult] |
| NGENCCROYLJK6Z | ENCODE | Download | 17,292 | 742,049,100 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYG | 1 | 1_1 | Not applicable | RIP-chip | bed broadPeak | 580,128 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001219,GEO:GSM787540;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStGm12878RipinputRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYG] [Life stage: Adult] |
| NGENC43LSCHHPL | ENCODE | Download | 4,526 | 212,606,943 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYE | 1 | 1_1 | SLBP | RIP-chip | bed broadPeak | 167,417 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001217,GEO:GSM787552;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStGm12878SlbpRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune sys | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip SLBP RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYE] [Life stage: Adult] |
| NGENCX5XHXG22G | ENCODE | Download | 7 | 236,242 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYF | 1 | 1_1 | T7-bacteriophage-t7 | RIP-chip | bed broadPeak | 297 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001218,GEO:GSM787537;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStGm12878T7tagRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune sy | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip T7-bacteriophage-t7 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYF] [Life stage: Adult] |
| NGENC6SF7T34EF | ENCODE | Download | 2,874 | 159,075,409 | RNA-binding protein associated mRNAs | hg19 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR000AYV | 1 | 1_1 | ELAVL1 | RIP-chip | bed broadPeak | 104,867 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens H1;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001234,GEO:GSM787626;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStH1hescElavl1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synon | Embryo | Embryonic | ENCODE H1-hESC (repl. 1) RIP-chip ELAVL1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYV] [Life stage: Embryonic] |
| NGENCSO2DG43RZ | ENCODE | Download | 22,855 | 1,044,319,658 | RNA-binding protein associated mRNAs | hg19 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR000AYX | 1 | 1_1 | Not applicable | RIP-chip | bed broadPeak | 797,486 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens H1;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001236,GEO:GSM787623;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStH1hescRipinputRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_syn | Embryo | Embryonic | ENCODE H1-hESC (repl. 1) RIP-chip RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYX] [Life stage: Embryonic] |
| NGENCIOPT3ATPP | ENCODE | Download | 147 | 6,592,997 | RNA-binding protein associated mRNAs | hg19 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR000AYW | 1 | 1_1 | T7-bacteriophage-t7 | RIP-chip | bed broadPeak | 4,798 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens H1;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001235,GEO:GSM787620;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStH1hescT7tagRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synony | Embryo | Embryonic | ENCODE H1-hESC (repl. 1) RIP-chip T7-bacteriophage-t7 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYW] [Life stage: Embryonic] |
| NGENCM62FQNFFH | ENCODE | Download | 6,715 | 397,250,031 | RNA-binding protein associated mRNAs | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000AYO | 1 | 1_1 | ELAVL1 | RIP-chip | bed broadPeak | 247,603 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens HeLa-S3;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 31 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001227,GEO:GSM787602;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStHelas3Elavl1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=repro | Reproductive | Adult | ENCODE HeLa-S3 (repl. 1) RIP-chip ELAVL1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYO] [Life stage: Adult] |
| NGENC66G7YRFVA | ENCODE | Download | 2,441 | 129,180,329 | RNA-binding protein associated mRNAs | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000AYP | 1 | 1_1 | PABPC1 | RIP-chip | bed broadPeak | 90,166 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens HeLa-S3;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 31 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001228,GEO:GSM787605;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStHelas3Pabpc1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=repro | Reproductive | Adult | ENCODE HeLa-S3 (repl. 1) RIP-chip PABPC1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYP] [Life stage: Adult] |
| NGENCWBRHVBMHT | ENCODE | Download | 19,527 | 902,608,046 | RNA-binding protein associated mRNAs | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000AYH | 1 | 1_1 | Not applicable | RIP-chip | bed broadPeak | 646,763 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens HeLa-S3;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 31 years;Reference=NR;External_resources=GEO:GSM787599,UCSC-ENCODE-hg19:wgEncodeEH001220;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStHelas3RipinputRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=rep | Reproductive | Adult | ENCODE HeLa-S3 (repl. 1) RIP-chip RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYH] [Life stage: Adult] |
| NGENCYAIH3KWJJ | ENCODE | Download | 2,469 | 162,008,102 | RNA-binding protein associated mRNAs | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000AYQ | 1 | 1_1 | T7-bacteriophage-t7 | RIP-chip | bed broadPeak | 86,529 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens HeLa-S3;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 31 years;Reference=NR;External_resources=GEO:GSM787596,UCSC-ENCODE-hg19:wgEncodeEH001229;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStHelas3T7tagRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=reprod | Reproductive | Adult | ENCODE HeLa-S3 (repl. 1) RIP-chip T7-bacteriophage-t7 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYQ] [Life stage: Adult] |
| NGENCS4TBV27ZR | ENCODE | Download | 5,585 | 301,950,226 | RNA-binding protein associated mRNAs | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AYR | 1 | 1_1 | ELAVL1 | RIP-chip | bed broadPeak | 206,072 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens HepG2;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSM787614,UCSC-ENCODE-hg19:wgEncodeEH001230;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStHepg2Elavl1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine s | Digestive | Child | ENCODE HepG2 (repl. 1) RIP-chip ELAVL1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYR] [Life stage: Child] |
| NGENCXTIWCLSAF | ENCODE | Download | 3,575 | 179,719,494 | RNA-binding protein associated mRNAs | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AYS | 1 | 1_1 | PABPC1 | RIP-chip | bed broadPeak | 132,021 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens HepG2;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSM787617,UCSC-ENCODE-hg19:wgEncodeEH001231;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStHepg2Pabpc1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine s | Digestive | Child | ENCODE HepG2 (repl. 1) RIP-chip PABPC1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYS] [Life stage: Child] |
| NGENCYACEPECQE | ENCODE | Download | 19,329 | 886,078,891 | RNA-binding protein associated mRNAs | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AYI | 1 | 1_1 | Not applicable | RIP-chip | bed broadPeak | 634,749 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens HepG2;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSM787611,UCSC-ENCODE-hg19:wgEncodeEH001221;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStHepg2RipinputRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine | Digestive | Child | ENCODE HepG2 (repl. 1) RIP-chip RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYI] [Life stage: Child] |
| NGENCM3A6MNQIF | ENCODE | Download | 2,941 | 184,089,992 | RNA-binding protein associated mRNAs | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000AYT | 1 | 1_1 | T7-bacteriophage-t7 | RIP-chip | bed broadPeak | 98,108 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens HepG2;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSM787608,UCSC-ENCODE-hg19:wgEncodeEH001232;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStHepg2T7tagRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine sy | Digestive | Child | ENCODE HepG2 (repl. 1) RIP-chip T7-bacteriophage-t7 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYT] [Life stage: Child] |
| NGENCR6NHBY4AA | ENCODE | Download | 2,268 | 99,241,192 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AYU | 1 | 1_1 | CELF1 | RIP-chip | bed broadPeak | 84,328 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001233,GEO:GSM787570;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStK562Celf1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=i | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip CELF1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYU] [Life stage: Adult] |
| NGENCC7ORAXFLS | ENCODE | Download | 3,267 | 146,979,800 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AYJ | 1 | 1_1 | ELAVL1 | RIP-chip | bed broadPeak | 120,711 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSM787564,UCSC-ENCODE-hg19:wgEncodeEH001222;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStK562Elavl1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims= | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip ELAVL1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYJ] [Life stage: Adult] |
| NGENCXHUXHZBA2 | ENCODE | Download | 4,422 | 165,591,767 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AYK | 1 | 1_1 | PABPC1 | RIP-chip | bed broadPeak | 163,329 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001223,GEO:GSM787567;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStK562Pabpc1RbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims= | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip PABPC1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYK] [Life stage: Adult] |
| NGENCC73SMMKTX | ENCODE | Download | 19,394 | 834,830,944 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AYN | 1 | 1_1 | Not applicable | RIP-chip | bed broadPeak | 673,401 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001226,GEO:GSM787561;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStK562RipinputRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slim | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYN] [Life stage: Adult] |
| NGENCUS4HQNLBE | ENCODE | Download | 25 | 472,374 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AYL | 1 | 1_1 | SLBP | RIP-chip | bed broadPeak | 859 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001224,GEO:GSM787573;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStK562SlbpRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=im | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip SLBP RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYL] [Life stage: Adult] |
| NGENCY2YMM6SF3 | ENCODE | Download | 1,809 | 53,105,316 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AYM | 1 | 1_1 | T7-bacteriophage-t7 | RIP-chip | bed broadPeak | 63,613 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSM787558,UCSC-ENCODE-hg19:wgEncodeEH001225;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-04-28;Submitted_track_name=wgEncodeSunyAlbanyGeneStK562T7tagRbpAssocRnaV2.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=i | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip T7-bacteriophage-t7 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYM] [Life stage: Adult] |
| NGENCZL7ZSSXOO | ENCODE | Download | 2,893 | 779,040 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYY | 1 | 1_1 | ELAVL1 | RIP-chip | bed broadPeak | 37,991 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001254,GEO:GSM999242;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-02-14;Submitted_track_name=wgEncodeSunyAlbanyTilingGm12878Elavl1RbpAssocRna.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune sys | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip ELAVL1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYY] [Life stage: Adult] |
| NGENCTAGB4ZQ7B | ENCODE | Download | 3,158 | 773,107 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AYZ | 1 | 1_1 | PABPC1 | RIP-chip | bed broadPeak | 41,516 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001255,GEO:GSM999243;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-02-14;Submitted_track_name=wgEncodeSunyAlbanyTilingGm12878Pabpc1RbpAssocRna.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune sys | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip PABPC1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000AYZ] [Life stage: Adult] |
| NGENCBJI5MA5CU | ENCODE | Download | 3,525 | 770,643 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000EYH | 1 | 1_1 | Not applicable | RIP-chip | bed broadPeak | 44,275 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001257,GEO:GSM999240;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-02-14;Submitted_track_name=wgEncodeSunyAlbanyTilingGm12878RipinputRbpAssocRna.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune s | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000EYH] [Life stage: Adult] |
| NGENCZYTR3N7WZ | ENCODE | Download | 3,670 | 778,062 | RNA-binding protein associated mRNAs | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000EYI | 1 | 1_1 | T7-bacteriophage-t7 | RIP-chip | bed broadPeak | 45,949 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens GM12878;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM999241,UCSC-ENCODE-hg19:wgEncodeEH001256;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-02-14;Submitted_track_name=wgEncodeSunyAlbanyTilingGm12878T7tagRbpAssocRna.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune syst | Cardiovascular | Adult | ENCODE GM12878 (repl. 1) RIP-chip T7-bacteriophage-t7 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000EYI] [Life stage: Adult] |
| NGENCZAMOESC2Z | ENCODE | Download | 4,125 | 774,680 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000EYM | 1 | 1_1 | ELAVL1 | RIP-chip | bed broadPeak | 53,748 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001258,GEO:GSM999238;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-02-14;Submitted_track_name=wgEncodeSunyAlbanyTilingK562Elavl1RbpAssocRna.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=im | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip ELAVL1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000EYM] [Life stage: Adult] |
| NGENC6HW44UFHX | ENCODE | Download | 2,675 | 768,218 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000EYL | 1 | 1_1 | PABPC1 | RIP-chip | bed broadPeak | 35,557 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSM999239,UCSC-ENCODE-hg19:wgEncodeEH001259;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-02-14;Submitted_track_name=wgEncodeSunyAlbanyTilingK562Pabpc1RbpAssocRna.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=im | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip PABPC1 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000EYL] [Life stage: Adult] |
| NGENCWC7OD2LBD | ENCODE | Download | 4,024 | 776,820 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000EYJ | 1 | 1_1 | Not applicable | RIP-chip | bed broadPeak | 50,653 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001261,GEO:GSM999236;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-02-14;Submitted_track_name=wgEncodeSunyAlbanyTilingK562RipinputRbpAssocRna.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims= | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000EYJ] [Life stage: Adult] |
| NGENCTZCL346VE | ENCODE | Download | 3,831 | 781,971 | RNA-binding protein associated mRNAs | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000EYK | 1 | 1_1 | T7-bacteriophage-t7 | RIP-chip | bed broadPeak | 48,105 | 06/01/2010 | 07/16/2020 | RNA binding | RIP-chip RNA-binding protein associated mRNAs | Biosample_summary=Homo sapiens K562;Lab=Scott Tenenbaum, SUNY-Albany;ENCODE_internal_tags=NR;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001260,GEO:GSM999237;Project=ENCODE;Award=U01HG004571;Experiment_date_released=2011-02-14;Submitted_track_name=wgEncodeSunyAlbanyTilingK562T7tagRbpAssocRna.broadPeak.bigBed;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic cell;ENCODE_system_slims=imm | Cardiovascular | Adult | ENCODE K562 (repl. 1) RIP-chip T7-bacteriophage-t7 RNA-binding protein associated mRNAs (broadPeak) [Experiment: ENCSR000EYK] [Life stage: Adult] |
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