Browse FILER

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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.

For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.

#Identifier Data Source Download file Number of intervals bp covered Output type Genome build cell type Biosample type Biosamples term id Tissue category ENCODE Experiment id Biological replicate(s) Technical replicate Antibody Assay File format File size Release date Date added to FILER Data Category Genomic feature type Track Description system category life stage trackName
NGEN000260 ENCODE Download 9,103 4,935,581 peaks hg19 A549 Cell line EFO:0001086 Lung ENCSR000DBS 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 154,752 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=A549;Lab=Jason Lieb, UNC;System=respiratory system;Submitted_track_name=wgEncodeOpenChromFaireA549Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Respiratory Unknown ENCODE A549 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBS] [Orig: Biosample_summary=A549;Lab=Jason Lieb, UNC;System=respiratory system;Submitted_track_name=wgEncodeOpenChromFaireA549Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000261 ENCODE Download 17,865 10,618,608 peaks hg19 Colon Tissue UBERON:0001155 Digestive ENCSR000DBU 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 313,583 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Colon tissue female adult (72 years) and male adult (43 years);Lab=Jason Lieb, UNC;System=digestive system;Submitted_track_name=wgEncodeOpenChromFaireColonocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Digestive Adult ENCODE Colon (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBU] [Orig: Biosample_summary=Colon tissue female adult (72 years) and male adult (43 years);Lab=Jason Lieb, UNC;System=digestive system;Submitted_track_name=wgEncodeOpenChromFaireColonocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Adult]
NGEN000262 ENCODE Download 25,048 14,089,775 peaks hg19 Endometrium Tissue UBERON:0001295 Female Reproductive ENCSR000DBV 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 442,616 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Endometrium tissue female adult (22 years) and female adult (28 years);Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireEndometriumocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Reproductive Adult ENCODE Endometrium (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBV] [Orig: Biosample_summary=Endometrium tissue female adult (22 years) and female adult (28 years);Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireEndometriumocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Adult]
NGEN000263 ENCODE Download 22,351 11,951,428 peaks hg19 Frontal cortex Tissue UBERON:0001870 Brain ENCSR000DBW 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 397,845 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Frontal cortex tissue female adult (67 years) and female adult (80 years);Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireFrontalcortexocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Nervous Adult ENCODE Frontal cortex (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBW] [Orig: Biosample_summary=Frontal cortex tissue female adult (67 years) and female adult (80 years);Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireFrontalcortexocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Adult]
NGEN000264 ENCODE Download 21,828 12,522,584 peaks hg19 H54 Cell line EFO:0002782 Brain ENCSR000DBX 1, 2, 3 1_1 ,2_1,3_1 Not applicable FAIRE-seq bed narrowPeak 375,803 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=H54;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireGlioblaPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Nervous Unknown ENCODE H54 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBX] [Orig: Biosample_summary=H54;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireGlioblaPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000265 ENCODE Download 12,921 5,759,602 peaks hg19 GM12878 Cell line EFO:0002784 Blood ENCSR000DBY 1, 2, 3 1_1 ,2_1,3_1 Not applicable FAIRE-seq bed narrowPeak 222,014 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=GM12878;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12878Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Cardiovascular Unknown ENCODE GM12878 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBY] [Orig: Biosample_summary=GM12878;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12878Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000266 ENCODE Download 33,886 21,829,907 peaks hg19 GM12891 Cell line EFO:0002785 Blood ENCSR000DBZ 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 591,095 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=GM12891;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12891Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Cardiovascular Unknown ENCODE GM12891 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBZ] [Orig: Biosample_summary=GM12891;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12891Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000267 ENCODE Download 28,664 18,543,369 peaks hg19 GM12892 Cell line EFO:0002786 Blood ENCSR000DCA 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 499,060 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=GM12892;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12892Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Cardiovascular Unknown ENCODE GM12892 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCA] [Orig: Biosample_summary=GM12892;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm12892Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000268 ENCODE Download 43,792 24,773,527 peaks hg19 GM18507 Cell line EFO:0002787 Blood ENCSR000DCB 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 768,056 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=GM18507;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm18507Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Cardiovascular Unknown ENCODE GM18507 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCB] [Orig: Biosample_summary=GM18507;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm18507Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000269 ENCODE Download 35,045 23,070,733 peaks hg19 GM19239 Cell line EFO:0002789 Blood ENCSR000DCC 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 612,456 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=GM19239;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm19239Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Cardiovascular Unknown ENCODE GM19239 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCC] [Orig: Biosample_summary=GM19239;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireGm19239Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000270 ENCODE Download 10,506 4,045,133 peaks hg19 H1-hESC Stem cell EFO:0003042 Embryo ENCSR000DCD 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 178,931 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=H1;Lab=Jason Lieb, UNC;Submitted_track_name=wgEncodeOpenChromFaireH1hescPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_life_stage=Stem Cell Embryo Embryonic ENCODE H1-hESC (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCD] [Orig: Biosample_summary=H1;Lab=Jason Lieb, UNC;Submitted_track_name=wgEncodeOpenChromFaireH1hescPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_life_stage=Stem Cell] [Life stage: Embryonic]
NGEN000271 ENCODE Download 64,441 33,296,222 peaks hg19 HeLa-S3 Cell line EFO:0002791 Female Reproductive ENCSR000DCF 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 1,099,381 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=HeLa-S3 treated with interferon alpha for 4 hours;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifna4hPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Reproductive Unknown ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCF] [Orig: Biosample_summary=HeLa-S3 treated with interferon alpha for 4 hours;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifna4hPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000272 ENCODE Download 63,810 35,301,725 peaks hg19 HeLa-S3 Cell line EFO:0002791 Female Reproductive ENCSR000DCE 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 1,102,567 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=HeLa-S3 treated with 5 ng/mL Interferon gamma for 4 hours;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifng4hPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Reproductive Unknown ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCE] [Orig: Biosample_summary=HeLa-S3 treated with 5 ng/mL Interferon gamma for 4 hours;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifng4hPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000273 ENCODE Download 30,962 10,408,559 peaks hg19 HeLa-S3 Cell line EFO:0002791 Female Reproductive ENCSR000DCG 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 517,053 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=HeLa-S3;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Reproductive Unknown ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCG] [Orig: Biosample_summary=HeLa-S3;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHelas3Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000274 ENCODE Download 24,511 10,892,275 peaks hg19 HepG2 Cell line EFO:0001187 Liver ENCSR000DCH 1, 2, 3 1_1 ,2_1,3_1 Not applicable FAIRE-seq bed narrowPeak 417,873 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=HepG2;Lab=Jason Lieb, UNC;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeOpenChromFaireHepg2Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Digestive Unknown ENCODE HepG2 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCH] [Orig: Biosample_summary=HepG2;Lab=Jason Lieb, UNC;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeOpenChromFaireHepg2Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000275 ENCODE Download 23,920 17,876,937 peaks hg19 HTR-8/SVneo Cell line EFO:0005709 Embryo ENCSR000DCI 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 413,252 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=HTR-8/SVneo;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHtr8Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Embryo Embryonic ENCODE HTR-8/SVneo (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCI] [Orig: Biosample_summary=HTR-8/SVneo;Lab=Jason Lieb, UNC;System=reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHtr8Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Embryonic]
NGEN000276 ENCODE Download 50,052 27,066,265 peaks hg19 Endothelial cell Primary cell CL:0002618 Umbilical Cord ENCSR000DCJ 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 871,857 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Jason Lieb, UNC;System=circulatory system,reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHuvecPk.narrowPeak.bigBed;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein Embryo Newborn ENCODE Endothelial cell (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCJ] [Orig: Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Jason Lieb, UNC;System=circulatory system,reproductive system;Submitted_track_name=wgEncodeOpenChromFaireHuvecPk.narrowPeak.bigBed;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein] [L
NGEN000277 ENCODE Download 3,105 1,250,650 peaks hg19 K562 Cell line EFO:0002067 Blood ENCSR000DCL 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 54,369 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562NabutPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Cardiovascular Unknown ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCL] [Orig: Biosample_summary=K562 treated with 500 ?M sodium butyrate for 72 hours;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562NabutPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000278 ENCODE Download 4,434 1,791,412 peaks hg19 K562 Cell line EFO:0002067 Blood ENCSR000DCK 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 77,313 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=K562 treated with 100 ?M hydroxyurea for 72 hours;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562OhureaPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Cardiovascular Unknown ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCK] [Orig: Biosample_summary=K562 treated with 100 ?M hydroxyurea for 72 hours;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562OhureaPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000279 ENCODE Download 35,383 17,132,843 peaks hg19 K562 Cell line EFO:0002067 Blood ENCSR000DCM 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 614,280 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=K562;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Cardiovascular Unknown ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCM] [Orig: Biosample_summary=K562;Lab=Jason Lieb, UNC;System=immune system;Submitted_track_name=wgEncodeOpenChromFaireK562Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000280 ENCODE Download 24,189 12,669,989 peaks hg19 Kidney Tissue UBERON:0002113 Urinary ENCSR000DCN 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 430,309 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Kidney tissue female adult (30 years) and male adult (54 years);Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireKidneyocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Renal Adult ENCODE Kidney (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCN] [Orig: Biosample_summary=Kidney tissue female adult (30 years) and male adult (54 years);Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireKidneyocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Adult]
NGEN000281 ENCODE Download 17,783 10,455,249 peaks hg19 MCF-7 Cell line EFO:0001203 Breast ENCSR000DCQ 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 305,294 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=MCF-7 treated with 10 nM 17?-estradiol for 30 minutes;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7Est10nm30mPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Reproductive Unknown ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCQ] [Orig: Biosample_summary=MCF-7 treated with 10 nM 17?-estradiol for 30 minutes;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7Est10nm30mPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000282 ENCODE Download 11,574 7,300,581 peaks hg19 MCF-7 Cell line EFO:0001203 Breast ENCSR000DCS 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 199,824 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=MCF-7 treated with 10 mM lactate for 24 hours;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7HypoxlacPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Reproductive Unknown ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCS] [Orig: Biosample_summary=MCF-7 treated with 10 mM lactate for 24 hours;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7HypoxlacPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000283 ENCODE Download 10,666 6,181,453 peaks hg19 MCF-7 Cell line EFO:0001203 Breast ENCSR000DCR 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 182,996 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=MCF-7;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7VehPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Reproductive Unknown ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCR] [Orig: Biosample_summary=MCF-7;Lab=Jason Lieb, UNC;System=integumental system,exocrine system;Submitted_track_name=wgEncodeOpenChromFaireMcf7VehPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000284 ENCODE Download 15,832 18,879,697 peaks hg19 Medulloblastoma Cell line EFO:0002939 Brain ENCSR000DCT 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 273,918 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=D721Med;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireMedulloPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Nervous Unknown ENCODE Medulloblastoma (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCT] [Orig: Biosample_summary=D721Med;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireMedulloPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000285 ENCODE Download 28,635 17,405,654 peaks hg19 A204.1 Cell line EFO:0005702 Skeletal Muscle ENCSR000DCU 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 512,300 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=A204.1;Lab=Jason Lieb, UNC;System=musculature;Submitted_track_name=wgEncodeOpenChromFaireMrta2041Pk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Muscular Unknown ENCODE A204.1 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCU] [Orig: Biosample_summary=A204.1;Lab=Jason Lieb, UNC;System=musculature;Submitted_track_name=wgEncodeOpenChromFaireMrta2041Pk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000286 ENCODE Download 28,417 19,442,126 peaks hg19 G-401.6 Cell line EFO:0005703 Urinary ENCSR000DCV 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 515,206 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=G401.6;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireMrtg4016Pk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19;premapping_cell_type=G-401.6 Renal Unknown ENCODE G-401.6 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCV] [Orig: Biosample_summary=G401.6;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireMrtg4016Pk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19;premapping_cell_type=G-401.6] [Life stage: Unknown]
NGEN000287 ENCODE Download 16,786 12,104,527 peaks hg19 TTC549 Cell line EFO:0005700 Liver ENCSR000DCW 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 304,537 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=TTC549;Lab=Jason Lieb, UNC;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeOpenChromFaireMrtttc549Pk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Digestive Unknown ENCODE TTC549 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCW] [Orig: Biosample_summary=TTC549;Lab=Jason Lieb, UNC;System=digestive system,exocrine system,endocrine system;Submitted_track_name=wgEncodeOpenChromFaireMrtttc549Pk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000288 ENCODE Download 26,750 12,594,444 peaks hg19 Astrocyte Primary cell CL:0000127 Brain ENCSR000DBT 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 446,004 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Astrocyte;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireNhaPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Nervous Unknown ENCODE Astrocyte (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBT] [Orig: Biosample_summary=Astrocyte;Lab=Jason Lieb, UNC;System=central nervous system;Submitted_track_name=wgEncodeOpenChromFaireNhaPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000289 ENCODE Download 5,353 2,705,923 peaks hg19 Epithelial cell Primary cell CL:0002328 Lung ENCSR000DCX 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 94,553 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Bronchial epithelial cell female;Lab=Jason Lieb, UNC;System=respiratory system;Submitted_track_name=wgEncodeOpenChromFaireNhbePk.narrowPeak.bigBed;previous_filer_cell_type=Bronchial epithelial cell;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19;premapping_cell_type=Epithelial cell;tissue_of_origin=Bronchial Respiratory Unknown ENCODE Epithelial cell (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCX] [Orig: Biosample_summary=Bronchial epithelial cell female;Lab=Jason Lieb, UNC;System=respiratory system;Submitted_track_name=wgEncodeOpenChromFaireNhbePk.narrowPeak.bigBed;previous_filer_cell_type=Bronchial epithelial cell;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19;premapping_cell_type=Epithelial cell;tissue_of_origin=Bronchial] [Life stage: Unknown]
NGEN000290 ENCODE Download 27,190 13,659,875 peaks hg19 Keratinocyte Primary cell CL:0000312 Skin ENCSR000DCY 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 464,690 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Keratinocyte female;Lab=Jason Lieb, UNC;System=integumental system;Submitted_track_name=wgEncodeOpenChromFaireNhekPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Integumentary Unknown ENCODE Keratinocyte (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCY] [Orig: Biosample_summary=Keratinocyte female;Lab=Jason Lieb, UNC;System=integumental system;Submitted_track_name=wgEncodeOpenChromFaireNhekPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000291 ENCODE Download 17,978 10,806,299 peaks hg19 Pancreas Tissue UBERON:0001264 Digestive ENCSR000DCZ 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 322,911 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Pancreas tissue male adult (54 years) and male adult (60 years);Lab=Jason Lieb, UNC;Submitted_track_name=wgEncodeOpenChromFairePancreasocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Digestive Adult ENCODE Pancreas (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCZ] [Orig: Biosample_summary=Pancreas tissue male adult (54 years) and male adult (60 years);Lab=Jason Lieb, UNC;Submitted_track_name=wgEncodeOpenChromFairePancreasocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Adult]
NGEN000292 ENCODE Download 11,647 5,946,733 peaks hg19 Islet - langerhans Tissue UBERON:0000006 Digestive ENCSR000DDA 1 1_1 Not applicable FAIRE-seq bed narrowPeak 206,211 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Islet of Langerhans tissue;Lab=Jason Lieb, UNC;System=endocrine system;Submitted_track_name=wgEncodeOpenChromFairePanisletsPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Digestive Unknown ENCODE Islet - langerhans (repl. 1) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDA] [Orig: Biosample_summary=Islet of Langerhans tissue;Lab=Jason Lieb, UNC;System=endocrine system;Submitted_track_name=wgEncodeOpenChromFairePanisletsPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000293 ENCODE Download 45,572 25,944,499 peaks hg19 RCC 7860 Cell line EFO:0005707 Urinary ENCSR000DDB 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 856,134 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=RCC 7860;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireRcc7860Pk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Renal Unknown ENCODE RCC 7860 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDB] [Orig: Biosample_summary=RCC 7860;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireRcc7860Pk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000294 ENCODE Download 9,915 5,965,749 peaks hg19 Small intestine Tissue UBERON:0002108 Digestive ENCSR000DDC 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 179,873 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Small intestine tissue male adult (60 years) and male adult (84 years);Lab=Jason Lieb, UNC;System=digestive system;Submitted_track_name=wgEncodeOpenChromFaireSmallintestineocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19 Digestive Adult ENCODE Small intestine (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDC] [Orig: Biosample_summary=Small intestine tissue male adult (60 years) and male adult (84 years);Lab=Jason Lieb, UNC;System=digestive system;Submitted_track_name=wgEncodeOpenChromFaireSmallintestineocPk.narrowPeak.bigBed;Experiment_date_released=09/19/2012;File_analysis_title=Lab custom hg19] [Life stage: Adult]
NGEN000295 ENCODE Download 14,080 8,227,805 peaks hg19 Urothelium cell line Cell line EFO:0005913 Urinary ENCSR000DDE 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 245,766 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Urothelium cell line;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireUrotsaPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Renal Unknown ENCODE Urothelium cell line (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDE] [Orig: Biosample_summary=Urothelium cell line;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireUrotsaPk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
NGEN000296 ENCODE Download 16,682 9,857,118 peaks hg19 Urothelium cell line Cell line EFO:0005913 Urinary ENCSR000DDD 1, 2 1_1 ,2_1 Not applicable FAIRE-seq bed narrowPeak 291,703 1/18/11 08/22/24 Called peaks FAIRE-seq peaks Biosample_summary=Urothelium cell line treated with UT189 for 1 hour;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireUrotsaUt189Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19 Renal Unknown ENCODE Urothelium cell line (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDD] [Orig: Biosample_summary=Urothelium cell line treated with UT189 for 1 hour;Lab=Jason Lieb, UNC;System=excretory system;Submitted_track_name=wgEncodeOpenChromFaireUrotsaUt189Pk.narrowPeak.bigBed;Experiment_date_released=03/21/2011;File_analysis_title=Lab custom hg19] [Life stage: Unknown]
Showing records 1 to 37 out of 37
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