Browse FILER
To select specific FILER datasets, use any of the filters below in any order:
Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
| #Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | life stage | trackName |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NGEN000260 | ENCODE | Download | 9,103 | 4,935,581 | peaks | hg19 | A549 | Cell line | EFO:0001086 | Lung | ENCSR000DBS | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 154,752 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens A549;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSM864345,UCSC-ENCODE-hg19:wgEncodeEH001126;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireA549Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=resp | Respiratory | Adult | ENCODE A549 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBS] [Life stage: Adult] |
| NGEN000261 | ENCODE | Download | 17,865 | 10,618,608 | peaks | hg19 | Colon | Tissue | UBERON:0001155 | Digestive | ENCSR000DBU | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 313,583 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens colon tissue female adult (72 years) and male adult (43 years);Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM1011125,UCSC-ENCODE-hg19:wgEncodeEH003495;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireColonocPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=colon;ENC | Digestive | Adult | ENCODE Colon (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBU] [Life stage: Adult] |
| NGEN000262 | ENCODE | Download | 25,048 | 14,089,775 | peaks | hg19 | Endometrium | Tissue | UBERON:0001295 | Female Reproductive | ENCSR000DBV | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 442,616 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens endometrium tissue female adult (22 years) and female adult (28 years);Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM1011119,UCSC-ENCODE-hg19:wgEncodeEH003503;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireEndometriumocPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_ | Reproductive | Adult | ENCODE Endometrium (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBV] [Life stage: Adult] |
| NGEN000263 | ENCODE | Download | 22,351 | 11,951,428 | peaks | hg19 | Frontal cortex | Tissue | UBERON:0001870 | Brain | ENCSR000DBW | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 397,845 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens frontal cortex tissue female adult (67 years) and female adult (80 years);Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM1011122,UCSC-ENCODE-hg19:wgEncodeEH003500;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireFrontalcortexocPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_ | Nervous | Adult | ENCODE Frontal cortex (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBW] [Life stage: Adult] |
| NGEN000264 | ENCODE | Download | 21,828 | 12,522,584 | peaks | hg19 | H54 | Cell line | EFO:0002782 | Brain | ENCSR000DBX | 1, 2, 3 | 1_1 ,2_1,3_1 | Not applicable | FAIRE-seq | bed narrowPeak | 375,803 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens H54;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 36 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001119,GEO:GSM864350;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireGlioblaPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H54;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=cen | Nervous | Adult | ENCODE H54 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBX] [Life stage: Adult] |
| NGEN000265 | ENCODE | Download | 12,921 | 5,759,602 | peaks | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000DBY | 1, 2, 3 | 1_1 ,2_1,3_1 | Not applicable | FAIRE-seq | bed narrowPeak | 222,014 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens GM12878;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000533,GEO:GSM864360;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireGm12878Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENC | Cardiovascular | Adult | ENCODE GM12878 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBY] [Life stage: Adult] |
| NGEN000266 | ENCODE | Download | 33,886 | 21,829,907 | peaks | hg19 | GM12891 | Cell line | EFO:0002785 | Blood | ENCSR000DBZ | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 591,095 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens GM12891;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM864349,UCSC-ENCODE-hg19:wgEncodeEH001116;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireGm12891Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM12891;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENC | Cardiovascular | Unknown | ENCODE GM12891 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBZ] [Life stage: Unknown] |
| NGEN000267 | ENCODE | Download | 28,664 | 18,543,369 | peaks | hg19 | GM12892 | Cell line | EFO:0002786 | Blood | ENCSR000DCA | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 499,060 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens GM12892;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM864357,UCSC-ENCODE-hg19:wgEncodeEH001117;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireGm12892Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM12892;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENC | Cardiovascular | Unknown | ENCODE GM12892 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCA] [Life stage: Unknown] |
| NGEN000268 | ENCODE | Download | 43,792 | 24,773,527 | peaks | hg19 | GM18507 | Cell line | EFO:0002787 | Blood | ENCSR000DCB | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 768,056 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens GM18507;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM864355,UCSC-ENCODE-hg19:wgEncodeEH000586;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireGm18507Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM18507;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENC | Cardiovascular | Unknown | ENCODE GM18507 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCB] [Life stage: Unknown] |
| NGEN000269 | ENCODE | Download | 35,045 | 23,070,733 | peaks | hg19 | GM19239 | Cell line | EFO:0002789 | Blood | ENCSR000DCC | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 612,456 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens GM19239;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000580,GEO:GSM864358;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireGm19239Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=GM19239;ENCODE_cell_slims=B cell,leukocyte,hematopoietic cell;ENC | Cardiovascular | Unknown | ENCODE GM19239 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCC] [Life stage: Unknown] |
| NGEN000270 | ENCODE | Download | 10,506 | 4,045,133 | peaks | hg19 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR000DCD | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 178,931 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens H1;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM864341,UCSC-ENCODE-hg19:wgEncodeEH000557;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireH1hescPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;EN | Embryo | Embryonic | ENCODE H1-hESC (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCD] [Life stage: Embryonic] |
| NGEN000271 | ENCODE | Download | 64,441 | 33,296,222 | peaks | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000DCF | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 1,099,381 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens HeLa-S3 treated with interferon alpha for 4 hours;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 31 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000587,GEO:GSM864356;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifna4hPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HeLa-S | Reproductive | Adult | ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCF] [Life stage: Adult] |
| NGEN000272 | ENCODE | Download | 63,810 | 35,301,725 | peaks | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000DCE | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 1,102,567 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens HeLa-S3 treated with 5 ng/mL Interferon gamma for 4 hours;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 31 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000588,GEO:GSM864359;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireHelas3Ifng4hPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_nam | Reproductive | Adult | ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCE] [Life stage: Adult] |
| NGEN000273 | ENCODE | Download | 30,962 | 10,408,559 | peaks | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000DCG | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 517,053 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens HeLa-S3;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 31 years;Reference=NR;External_resources=GEO:GSM864348,UCSC-ENCODE-hg19:wgEncodeEH000544;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireHelas3Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell; | Reproductive | Adult | ENCODE HeLa-S3 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCG] [Life stage: Adult] |
| NGEN000274 | ENCODE | Download | 24,511 | 10,892,275 | peaks | hg19 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR000DCH | 1, 2, 3 | 1_1 ,2_1,3_1 | Not applicable | FAIRE-seq | bed narrowPeak | 417,873 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens HepG2;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSM864354,UCSC-ENCODE-hg19:wgEncodeEH000546;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireHepg2Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCOD | Digestive | Child | ENCODE HepG2 (repl. 1, 2, 3) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCH] [Life stage: Child] |
| NGEN000275 | ENCODE | Download | 23,920 | 17,876,937 | peaks | hg19 | HTR-8/SVneo | Cell line | EFO:0005709 | Embryo | ENCSR000DCI | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 413,252 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens HTR-8/SVneo;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=embryonic 6-12 weeks;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001124,GEO:GSM864343;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireHtr8Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HTR-8/SVneo;ENCODE_cell_slims=NR;ENCODE_system | Embryo | Embryonic | ENCODE HTR-8/SVneo (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCI] [Life stage: Embryonic] |
| NGEN000276 | ENCODE | Download | 50,052 | 27,066,265 | peaks | hg19 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR000DCJ | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 871,857 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM864352,UCSC-ENCODE-hg19:wgEncodeEH000549;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireHuvecPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=endothelial cell of umbilical ve | Embryo | Newborn | ENCODE Endothelial cell (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCJ] [Life stage: Newborn] |
| NGEN000277 | ENCODE | Download | 3,105 | 1,250,650 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000DCL | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 54,369 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens K562 treated with 500 _M sodium butyrate for 72 hours;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSM864339,UCSC-ENCODE-hg19:wgEncodeEH001120;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireK562NabutPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562; | Cardiovascular | Adult | ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCL] [Life stage: Adult] |
| NGEN000278 | ENCODE | Download | 4,434 | 1,791,412 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000DCK | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 77,313 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens K562 treated with 100 _M hydroxyurea for 72 hours;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSM864340,UCSC-ENCODE-hg19:wgEncodeEH001121;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireK562OhureaPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENC | Cardiovascular | Adult | ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCK] [Life stage: Adult] |
| NGEN000279 | ENCODE | Download | 35,383 | 17,132,843 | peaks | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000DCM | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 614,280 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens K562;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000531,GEO:GSM864361;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireK562Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=leukocyte,cancer cell,hematopoietic | Cardiovascular | Adult | ENCODE K562 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCM] [Life stage: Adult] |
| NGEN000280 | ENCODE | Download | 24,189 | 12,669,989 | peaks | hg19 | Kidney | Tissue | UBERON:0002113 | Urinary | ENCSR000DCN | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 430,309 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens kidney tissue female adult (30 years) and male adult (54 years);Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM1011123,UCSC-ENCODE-hg19:wgEncodeEH003501;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireKidneyocPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=kidney; | Renal | Adult | ENCODE Kidney (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCN] [Life stage: Adult] |
| NGEN000281 | ENCODE | Download | 17,783 | 10,455,249 | peaks | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000DCQ | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 305,294 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens MCF-7 treated with 10 nM 17_-estradiol for 30 minutes;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 69 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003499,GEO:GSM1011121;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireMcf7Est10nm30mPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name | Reproductive | Adult | ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCQ] [Life stage: Adult] |
| NGEN000282 | ENCODE | Download | 11,574 | 7,300,581 | peaks | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000DCS | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 199,824 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens MCF-7 treated with 10 mM lactate for 24 hours;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 69 years;Reference=NR;External_resources=GEO:GSM864344,UCSC-ENCODE-hg19:wgEncodeEH001125;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireMcf7HypoxlacPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=MCF-7;ENCO | Reproductive | Adult | ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCS] [Life stage: Adult] |
| NGEN000283 | ENCODE | Download | 10,666 | 6,181,453 | peaks | hg19 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR000DCR | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 182,996 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens MCF-7;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 69 years;Reference=NR;External_resources=GEO:GSM1011128,UCSC-ENCODE-hg19:wgEncodeEH003496;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireMcf7VehPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=cancer cell,epithelial cell;EN | Reproductive | Adult | ENCODE MCF-7 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCR] [Life stage: Adult] |
| NGEN000284 | ENCODE | Download | 15,832 | 18,879,697 | peaks | hg19 | Medulloblastoma | Cell line | EFO:0002939 | Brain | ENCSR000DCT | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 273,918 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens D721Med;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=child 2 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001118,GEO:GSM864351;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireMedulloPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=D721Med;ENCODE_cell_slims=neural cell;ENCODE_system_sl | Nervous | Child | ENCODE Medulloblastoma (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCT] [Life stage: Child] |
| NGEN000285 | ENCODE | Download | 28,635 | 17,405,654 | peaks | hg19 | A204.1 | Cell line | EFO:0005702 | Skeletal Muscle | ENCSR000DCU | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 512,300 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens A204.1;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=child 1 year;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003492,GEO:GSM1011126;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireMrta2041Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A204.1;ENCODE_cell_slims=cancer cell,epithelial cell;E | Muscular | Child | ENCODE A204.1 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCU] [Life stage: Child] |
| NGEN000286 | ENCODE | Download | 28,417 | 19,442,126 | peaks | hg19 | G-401.6 | Cell line | EFO:0005703 | Urinary | ENCSR000DCV | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 515,206 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens G401.6;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=child 3 months;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003493,GEO:GSM1011127;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireMrtg4016Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=G401.6;ENCODE_cell_slims=epithelial cell;ENCODE_syst | Renal | Child | ENCODE G-401.6 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCV] [Life stage: Child] |
| NGEN000287 | ENCODE | Download | 16,786 | 12,104,527 | peaks | hg19 | TTC549 | Cell line | EFO:0005700 | Liver | ENCSR000DCW | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 304,537 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens TTC549;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003494,GEO:GSM1011124;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireMrtttc549Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=TTC549;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_sys | Digestive | Unknown | ENCODE TTC549 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCW] [Life stage: Unknown] |
| NGEN000288 | ENCODE | Download | 26,750 | 12,594,444 | peaks | hg19 | Astrocyte | Primary cell | CL:0000127 | Brain | ENCSR000DBT | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 446,004 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens astrocyte;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM864347,UCSC-ENCODE-hg19:wgEncodeEH001115;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireNhaPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=astrocyte;ENCODE_cell_slims=neural cell;ENCODE_system_slims=central | Nervous | Unknown | ENCODE Astrocyte (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DBT] [Life stage: Unknown] |
| NGEN000289 | ENCODE | Download | 5,353 | 2,705,923 | peaks | hg19 | Epithelial cell | Primary cell | CL:0002328 | Lung | ENCSR000DCX | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 94,553 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens bronchial epithelial cell female;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM864337,UCSC-ENCODE-hg19:wgEncodeEH000604;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireNhbePk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=bronchial epithelial cell;ENCODE_cell_slims | Respiratory | Unknown | ENCODE Epithelial cell (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCX] [Life stage: Unknown] |
| NGEN000290 | ENCODE | Download | 27,190 | 13,659,875 | peaks | hg19 | Keratinocyte | Primary cell | CL:0000312 | Skin | ENCSR000DCY | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 464,690 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens keratinocyte female;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000558,GEO:GSM864338;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireNhekPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial c | Integumentary | Unknown | ENCODE Keratinocyte (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCY] [Life stage: Unknown] |
| NGEN000291 | ENCODE | Download | 17,978 | 10,806,299 | peaks | hg19 | Pancreas | Tissue | UBERON:0001264 | Digestive | ENCSR000DCZ | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 322,911 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens pancreas tissue male adult (54 years) and male adult (60 years);Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003497,GEO:GSM1011129;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFairePancreasocPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=pancr | Digestive | Adult | ENCODE Pancreas (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DCZ] [Life stage: Adult] |
| NGEN000292 | ENCODE | Download | 11,647 | 5,946,733 | peaks | hg19 | Islet - langerhans | Tissue | UBERON:0000006 | Digestive | ENCSR000DDA | 1 | 1_1 | Not applicable | FAIRE-seq | bed narrowPeak | 206,211 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens islet of Langerhans tissue;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH000573,GEO:GSM864346;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFairePanisletsPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=islet of Langerhans;ENCODE_cell_slims=NR;ENC | Digestive | Unknown | ENCODE Islet - langerhans (repl. 1) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDA] [Life stage: Unknown] |
| NGEN000293 | ENCODE | Download | 45,572 | 25,944,499 | peaks | hg19 | RCC 7860 | Cell line | EFO:0005707 | Urinary | ENCSR000DDB | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 856,134 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens RCC 7860;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSM1011120,UCSC-ENCODE-hg19:wgEncodeEH003498;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireRcc7860Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=RCC 7860;ENCODE_cell_slims=cancer cell,epithelial c | Renal | Adult | ENCODE RCC 7860 (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDB] [Life stage: Adult] |
| NGEN000294 | ENCODE | Download | 9,915 | 5,965,749 | peaks | hg19 | Small intestine | Tissue | UBERON:0002108 | Digestive | ENCSR000DDC | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 179,873 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens small intestine tissue male adult (60 years) and male adult (84 years);Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM1011130,UCSC-ENCODE-hg19:wgEncodeEH003502;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-09-19;Submitted_track_name=wgEncodeOpenChromFaireSmallintestineocPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_te | Digestive | Adult | ENCODE Small intestine (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDC] [Life stage: Adult] |
| NGEN000295 | ENCODE | Download | 14,080 | 8,227,805 | peaks | hg19 | Urothelium cell line | Cell line | EFO:0005913 | Urinary | ENCSR000DDE | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 245,766 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens urothelium cell line;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=child 12 years;Reference=NR;External_resources=GEO:GSM864353,UCSC-ENCODE-hg19:wgEncodeEH001122;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireUrotsaPk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=urothelium cell line;ENCODE_cell_slims=NR | Renal | Child | ENCODE Urothelium cell line (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDE] [Life stage: Child] |
| NGEN000296 | ENCODE | Download | 16,682 | 9,857,118 | peaks | hg19 | Urothelium cell line | Cell line | EFO:0005913 | Urinary | ENCSR000DDD | 1, 2 | 1_1 ,2_1 | Not applicable | FAIRE-seq | bed narrowPeak | 291,703 | 1/18/2011 | 08/22/2024 | Accessible chromatin | FAIRE-seq peaks | Biosample_summary=Homo sapiens urothelium cell line treated with UT189 for 1 hour;Lab=Jason Lieb, UNC;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=child 12 years;Reference=NR;External_resources=GEO:GSM864342,UCSC-ENCODE-hg19:wgEncodeEH001123;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2011-03-21;Submitted_track_name=wgEncodeOpenChromFaireUrotsaUt189Pk.narrowPeak.bigBed;ENCODE_preferred_default=true;ENCODE_biosample_term_name=urothe | Renal | Child | ENCODE Urothelium cell line (repl. 1, 2) FAIRE-seq peaks (narrowPeak) [Experiment: ENCSR000DDD] [Life stage: Child] |
Showing records 1 to 37 out of 37
* Click on the column header to sort the table by the corresponding column