Browse FILER
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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
#Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | life stage | trackName |
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NGEN000429 | ENCODE | Download | 1,187 | 366,636,115 | Chromatin Interactions | hg19 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000CYD | Not reported | Not reported | Not applicable | 5C | bed bed12 | 29,213 | 6/5/12 | 02/19/19 | Chromatin Interactions | 5C Chromatin Interactions | Biosample_summary=GM12878;Lab=Job Dekker, UMass;System=immune system;Submitted_track_name=wgEncodeUmassDekker5CGm12878PkV2.bigBed;Experiment_date_released=03/22/2012;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE GM12878 5C Chromatin Interactions (bed12) [Experiment: ENCSR000CYD] [Orig: Biosample_summary=GM12878;Lab=Job Dekker, UMass;System=immune system;Submitted_track_name=wgEncodeUmassDekker5CGm12878PkV2.bigBed;Experiment_date_released=03/22/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
NGEN000430 | ENCODE | Download | 1,238 | 397,039,704 | Chromatin Interactions | hg19 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR000CYC | Not reported | Not reported | Not applicable | 5C | bed bed12 | 31,352 | 6/5/12 | 02/19/19 | Chromatin Interactions | 5C Chromatin Interactions | Biosample_summary=H1;Lab=Job Dekker, UMass;Submitted_track_name=wgEncodeUmassDekker5CH1hescPkV2.bigBed;Experiment_date_released=03/22/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_life_stage=Stem Cell | Embryo | Embryonic | ENCODE H1-hESC 5C Chromatin Interactions (bed12) [Experiment: ENCSR000CYC] [Orig: Biosample_summary=H1;Lab=Job Dekker, UMass;Submitted_track_name=wgEncodeUmassDekker5CH1hescPkV2.bigBed;Experiment_date_released=03/22/2012;File_analysis_title=Lab custom hg19;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_life_stage=Stem Cell] [Life stage: Embryonic] |
NGEN000431 | ENCODE | Download | 1,874 | 560,284,065 | Chromatin Interactions | hg19 | HeLa-S3 | Cell line | EFO:0002791 | Female Reproductive | ENCSR000CYB | Not reported | Not reported | Not applicable | 5C | bed bed12 | 44,382 | 6/5/12 | 02/19/19 | Chromatin Interactions | 5C Chromatin Interactions | Biosample_summary=HeLa-S3;Lab=Job Dekker, UMass;System=reproductive system;Submitted_track_name=wgEncodeUmassDekker5CHelas3PkV2.bigBed;Experiment_date_released=03/22/2012;File_analysis_title=Lab custom hg19 | Reproductive | Unknown | ENCODE HeLa-S3 5C Chromatin Interactions (bed12) [Experiment: ENCSR000CYB] [Orig: Biosample_summary=HeLa-S3;Lab=Job Dekker, UMass;System=reproductive system;Submitted_track_name=wgEncodeUmassDekker5CHelas3PkV2.bigBed;Experiment_date_released=03/22/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
NGEN000432 | ENCODE | Download | 1,726 | 525,760,566 | Chromatin Interactions | hg19 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000CYA | Not reported | Not reported | Not applicable | 5C | bed bed12 | 41,663 | 6/5/12 | 02/19/19 | Chromatin Interactions | 5C Chromatin Interactions | Biosample_summary=K562;Lab=Job Dekker, UMass;System=immune system;Submitted_track_name=wgEncodeUmassDekker5CK562PkV2.bigBed;Experiment_date_released=03/22/2012;File_analysis_title=Lab custom hg19 | Cardiovascular | Unknown | ENCODE K562 5C Chromatin Interactions (bed12) [Experiment: ENCSR000CYA] [Orig: Biosample_summary=K562;Lab=Job Dekker, UMass;System=immune system;Submitted_track_name=wgEncodeUmassDekker5CK562PkV2.bigBed;Experiment_date_released=03/22/2012;File_analysis_title=Lab custom hg19] [Life stage: Unknown] |
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