NGABCGRREIWLXT Download track View in genome browser Nasser_2021_ABC_enhancer_gene Epithelial cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCGRREIWLXT Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,824 bp covered 24,947,869 Output type enhancer-gene interactions Genome build hg38 cell type Epithelial cell Biosample type Primary cell Biosamples term id CL:0000066 Tissue category Male Reproductive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,949,361 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_epithelial_cell_of_prostate-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 174a8a854db3f882f35dc025f87ee3eb wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_epithelial_cell_of_prostate-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activi tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_epithelial_cell_of_prostate-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Ac Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/epithelial_cell_of_prostate-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/epithelial_cell_of_prostate-ENCODE_Enhancer Raw file md5 80db786148452190085357836b54458f Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=epithelial_cell_of_prostate-ENCODE;tissue_of_origin=Prostate;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_do system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Epithelial cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCHI2WI3WCH Download track View in genome browser Nasser_2021_ABC_enhancer_gene Stomach ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCHI2WI3WCH Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 63,932 bp covered 29,573,070 Output type enhancer-gene interactions Genome build hg38 cell type Stomach Biosample type Primary tissue Biosamples term id UBERON:0000945 Tissue category Digestive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,258,345 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_stomach-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 71d6de0bbc696ac9ce818b9266a8f8bd wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_stomach-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_stomach-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/stomach-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/stomach-Roadmap_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 d1a683abc8e8089afb979feb7e522973 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=stomach-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;abc_ce system category Digestive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Stomach ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCHSVJGWCZQ Download track View in genome browser Nasser_2021_ABC_enhancer_gene Large intestine ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCHSVJGWCZQ Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 68,082 bp covered 36,647,286 Output type enhancer-gene interactions Genome build hg38 cell type Large intestine Biosample type Primary tissue Biosamples term id UBERON:0000059 Tissue category Digestive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,592,684 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_large_intestine_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 1f29e81544ac076649539fdc3b038e53 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_large_intestine_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_large_intestine_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activit Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/large_intestine_fetal-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/large_intestine_fetal-Roadmap_EnhancerPrediction Raw file md5 5b116bc134063e8429ef4c300303354f Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=large_intestine_fetal-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/natu system category Digestive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Large intestine ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCHW3BTOIVK Download track View in genome browser Nasser_2021_ABC_enhancer_gene Placenta ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCHW3BTOIVK Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,750 bp covered 36,512,386 Output type enhancer-gene interactions Genome build hg38 cell type Placenta Biosample type Primary tissue Biosamples term id UBERON:0001987 Tissue category Placenta ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,237,058 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_placenta-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 669030d7393544b549a9b4ebf73a4669 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_placenta-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mode tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_placenta-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/placenta-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/placenta-Roadmap_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 1c7f4b16f8a28e1e95653c0d8464cfac Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=placenta-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;abc_c system category Placental life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Placenta ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCIUZWDZ6D6 Download track View in genome browser Nasser_2021_ABC_enhancer_gene Uterus ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCIUZWDZ6D6 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 60,516 bp covered 38,408,534 Output type enhancer-gene interactions Genome build hg38 cell type Uterus Biosample type Tissue Biosamples term id UBERON:0000995 Tissue category Female Reproductive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,029,470 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_uterus-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 309068c218f66deed20038f4dc5ebd82 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_uterus-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_uterus-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/uterus-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/uterus-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 b92fedd0a085f0291fecd282e18486d8 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=uterus-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cellt system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Uterus ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCJ4ZBF2ZF5 Download track View in genome browser Nasser_2021_ABC_enhancer_gene A549 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCJ4ZBF2ZF5 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,584 bp covered 33,488,076 Output type enhancer-gene interactions Genome build hg38 cell type A549 Biosample type Primary cell Biosamples term id EFO:0001086 Tissue category Lung ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,262,507 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 d030dd1b83d34c5a1b6a25a8f3443c30 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nas tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/A549_treated_with_et Raw file md5 3cf139ea325ae16c943484782a4b95a3 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi= system category Respiratory life stage Unknown trackName Nasser_2021_ABC_enhancer_gene A549 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCJ6OMGR5A5 Download track View in genome browser Nasser_2021_ABC_enhancer_gene IMR-90 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCJ6OMGR5A5 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 57,132 bp covered 25,569,979 Output type enhancer-gene interactions Genome build hg38 cell type IMR-90 Biosample type Primary cell Biosamples term id EFO:0001196 Tissue category Lung ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,800,811 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_IMR90-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 f3384dcc33950f7c01f232d81fcd8e85 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_IMR90-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_IMR90-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/IMR90-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/IMR90-Roadmap_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 cf2f24183e7e7c034712b92990d02b7f Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=IMR90-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;abc_cell system category Respiratory life stage Unknown trackName Nasser_2021_ABC_enhancer_gene IMR-90 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCJDJXWJZXP Download track View in genome browser Nasser_2021_ABC_enhancer_gene Adrenal gland ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCJDJXWJZXP Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 63,036 bp covered 22,554,341 Output type enhancer-gene interactions Genome build hg38 cell type Adrenal gland Biosample type Tissue Biosamples term id UBERON:0002369 Tissue category Endocrine ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,278,088 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adrenal_gland-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 e5b79def0fe2de3abf7eabf4104564d8 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adrenal_gland-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adrenal_gland-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Cont Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/adrenal_gland-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/adrenal_gland-ENCODE_EnhancerPredictionsFull.txt.lifted.b Raw file md5 9984f57bb4c715b8bc1a0dcf7177d04d Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=adrenal_gland-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;ab system category Endocrine life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Adrenal gland ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCJFEYSBFYU Download track View in genome browser Nasser_2021_ABC_enhancer_gene MCF-7 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCJFEYSBFYU Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 55,872 bp covered 26,820,614 Output type enhancer-gene interactions Genome build hg38 cell type MCF-7 Biosample type Cell line Biosamples term id EFO:0001203 Tissue category Breast ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,680,487 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF-7-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 6f51682cd458f4046d75ee8a6fb54994 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF-7-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/be tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF-7-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mode Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MCF-7-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MCF-7-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 30328a3d720533ddb9420a0e86cfa969 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=MCF-7-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cellty system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene MCF-7 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCJHFOSV32S Download track View in genome browser Nasser_2021_ABC_enhancer_gene Natural killer cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCJHFOSV32S Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 67,204 bp covered 37,868,190 Output type enhancer-gene interactions Genome build hg38 cell type Natural killer cell Biosample type Primary cell Biosamples term id CL:0000623 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,613,475 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD56-positive_natural_killer_cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 a3dce8d93d2fc0b30837c91be73de7fa wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD56-positive_natural_killer_cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/AB tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD56-positive_natural_killer_cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_AB Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD56-positive_natural_killer_cells-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD56-positive_natural_killer_cells- Raw file md5 b7f5523f7b11d5a821492c1a7afe7d2e Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD56-positive_natural_killer_cells-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Natural killer cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCJMRPOUJ2G Download track View in genome browser Nasser_2021_ABC_enhancer_gene Coronary artery ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCJMRPOUJ2G Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 60,700 bp covered 25,366,692 Output type enhancer-gene interactions Genome build hg38 cell type Coronary artery Biosample type Tissue Biosamples term id UBERON:0001621 Tissue category Blood Vessel ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,113,754 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_coronary_artery-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 4f34c9d6159c19eb84bf7ab3022c8a49 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_coronary_artery-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contac tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_coronary_artery-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Co Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/coronary_artery-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/coronary_artery-ENCODE_EnhancerPredictionsFull.txt.lift Raw file md5 1da60830d16498155240cab3fe2007c2 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=coronary_artery-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247; system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Coronary artery ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCJOBW4HYG6 Download track View in genome browser Nasser_2021_ABC_enhancer_gene Monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCJOBW4HYG6 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 51,674 bp covered 14,697,390 Output type enhancer-gene interactions Genome build hg38 cell type Monocyte Biosample type Cell line Biosamples term id CL:0000576 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,424,475 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP-1_monocyte-VanBortle2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 0361fc0c16fc2091fabadb9163ab59dd wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP-1_monocyte-VanBortle2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by- tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP-1_monocyte-VanBortle2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP-1_monocyte-VanBortle2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP-1_monocyte-VanBortle2017_EnhancerPredictionsF Raw file md5 a83fa730250815e76bf8c87fee9d7d44 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP-1_monocyte-VanBortle2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=VanBortle 2017;biosample_type_note=needs revising;source_pubmed=28931413;source_doi=https://doi. system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCJUQQJR3LV Download track View in genome browser Nasser_2021_ABC_enhancer_gene Adipose ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCJUQQJR3LV Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,374 bp covered 27,071,018 Output type enhancer-gene interactions Genome build hg38 cell type Adipose Biosample type Tissue Biosamples term id NCIT:C12472 Tissue category Adipose ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,151,632 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adipose_tissue-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 587ce89a8d0b7f47a22606576cc93567 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adipose_tissue-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adipose_tissue-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Con Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/adipose_tissue-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/adipose_tissue-ENCODE_EnhancerPredictionsFull.txt.lifted Raw file md5 4954d88b64522755d48887d6fdb36ac0 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=adipose_tissue-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;a system category Integumentary life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Adipose ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCKA6CS53H5 Download track View in genome browser Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCKA6CS53H5 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,874 bp covered 16,936,182 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,911,617 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_72h_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 4459049875ad3c63a3d2990c44d14d89 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_72h_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_72h_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Conta Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_72h_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_72h_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 3cceed897b750f5746c0520fad67b2d6 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP_pmaLPS_ATAC_72h;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Nasser_2021;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/ system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCKGEIUZPH5 Download track View in genome browser Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCKGEIUZPH5 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 65,226 bp covered 24,068,875 Output type enhancer-gene interactions Genome build hg38 cell type Dendritic cell Biosample type In vitro differentiated cells Biosamples term id CL:0000451 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,506,269 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_4_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 5782e27ae4df994652eef797997ba89c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_4_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationt tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_4_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotat Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_4_hour-Garber2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted Raw file md5 ec6db86cef8f033e3acde99569478a44 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_4_hour-Garber2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Garber 2017;biosample_type_note=needs revising system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCKGT4F7XB5 Download track View in genome browser Nasser_2021_ABC_enhancer_gene SK-N-SH ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCKGT4F7XB5 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 55,036 bp covered 18,905,651 Output type enhancer-gene interactions Genome build hg38 cell type SK-N-SH Biosample type Cell line Biosamples term id EFO:0003072 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,591,272 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_SK-N-SH-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 657f13d8f9cab7164e75aba995b5d04a wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_SK-N-SH-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_SK-N-SH-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mo Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/SK-N-SH-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/SK-N-SH-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 53402017b810993e22e4d03ec0b44d94 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=SK-N-SH-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cell system category Nervous life stage Unknown trackName Nasser_2021_ABC_enhancer_gene SK-N-SH ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCKNXOXVCI5 Download track View in genome browser Nasser_2021_ABC_enhancer_gene H1-hESC ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCKNXOXVCI5 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 59,554 bp covered 31,758,046 Output type enhancer-gene interactions Genome build hg38 cell type H1-hESC Biosample type Primary cell Biosamples term id EFO:0003042 Tissue category Stem Cell ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,964,450 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1-hESC-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 1919ebd2ea4870bdec3397899cd02f77 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1-hESC-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1-hESC-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H1-hESC-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H1-hESC-Roadmap_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 ad1aed96e4dacd0c3bfdd6238924f9ad Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=H1-hESC-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;abc_ce system category Stem Cell life stage Unknown trackName Nasser_2021_ABC_enhancer_gene H1-hESC ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCKTNGYDGKI Download track View in genome browser Nasser_2021_ABC_enhancer_gene Osteoblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCKTNGYDGKI Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,152 bp covered 26,998,510 Output type enhancer-gene interactions Genome build hg38 cell type Osteoblast Biosample type Primary cell Biosamples term id CL:0000062 Tissue category Bone ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,825,067 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_osteoblast-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 dfa47b5c9d2bf91a7da1712414ff1919 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_osteoblast-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_osteoblast-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/osteoblast-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/osteoblast-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 9e316a83a19c336d45b9b7ecc95045a4 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=osteoblast-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_c system category Skeletal life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Osteoblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCKUSQAV4IM Download track View in genome browser Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCKUSQAV4IM Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,014 bp covered 22,277,599 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,503,853 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 1db38bbf87d717de34ed59c1bd226e00 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasse tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/N Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_BG_d1-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte Raw file md5 b55decc0ff7d8abdf2c4c66f322a439a Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_BG_d1-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;source system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCLO6IEKR2S Download track View in genome browser Nasser_2021_ABC_enhancer_gene Natural killer cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCLO6IEKR2S Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 65,724 bp covered 23,325,253 Output type enhancer-gene interactions Genome build hg38 cell type Natural killer cell Biosample type Primary cell Biosamples term id CL:0000623 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,414,325 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_natural_killer_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 d9e3a250c1dd784c7ae7aa2b8c760349 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_natural_killer_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_natural_killer_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activi Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/natural_killer_cell-Corces2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/natural_killer_cell-Corces2016_EnhancerPredicti Raw file md5 8c57e589969cf7347217c0163bcf890d Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=natural_killer_cell-Corces2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Corces 2016;biosample_type_note=needs revising;source_pubmed=27526324;source_doi=https://doi.o system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Natural killer cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCLSNZ7ZMYX Download track View in genome browser Nasser_2021_ABC_enhancer_gene A673 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCLSNZ7ZMYX Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 56,120 bp covered 37,976,697 Output type enhancer-gene interactions Genome build hg38 cell type A673 Biosample type Cell line Biosamples term id EFO:0002106 Tissue category Skeletal Muscle ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,738,021 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_A673-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 1986936af5c2d91610b246b6c2d028c9 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_A673-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_A673-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/A673-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/A673-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 ec91fdbd78a124694958c0bc9703e7df Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=A673-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_celltyp system category Muscular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene A673 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCMAUPXU6VT Download track View in genome browser Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCMAUPXU6VT Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 57,526 bp covered 18,891,992 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,863,167 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_d6-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 d8edbb48594680ea842591b919a0f830 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_d6-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasse tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_d6-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/N Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_BG_d6-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte Raw file md5 ae4fceb522d266169e8a7bb357ef816a Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_BG_d6-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;source system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCMBRDKI2SY Download track View in genome browser Nasser_2021_ABC_enhancer_gene iPS DF 19.11 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCMBRDKI2SY Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 64,340 bp covered 30,892,836 Output type enhancer-gene interactions Genome build hg38 cell type iPS DF 19.11 Biosample type Primary cell Biosamples term id EFO:0007096 Tissue category iPSC ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,354,538 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_iPS_DF_19.11_Cell_Line-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 cbfc3e2e10444d48de7e8a5fe7dc9fd5 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_iPS_DF_19.11_Cell_Line-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_iPS_DF_19.11_Cell_Line-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activi Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/iPS_DF_19.11_Cell_Line-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/iPS_DF_19.11_Cell_Line-Roadmap_EnhancerPredicti Raw file md5 e6249eafa7b5b56c4336b294e640093f Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=iPS_DF_19.11_Cell_Line-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nat system category Stem Cell life stage Unknown trackName Nasser_2021_ABC_enhancer_gene iPS DF 19.11 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCMGNUWRMNR Download track View in genome browser Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCMGNUWRMNR Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,618 bp covered 22,327,692 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,573,910 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 893893d75ea841dd0c35c2bb9e8e906c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nas tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_RPMI_4h-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocy Raw file md5 e53050c200e1f2c0594c893d42b8d69f Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_RPMI_4h-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;sour system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCMLOFX277I Download track View in genome browser Nasser_2021_ABC_enhancer_gene Adipose ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCMLOFX277I Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,536 bp covered 27,474,740 Output type enhancer-gene interactions Genome build hg38 cell type Adipose Biosample type In vitro differentiated cells Biosamples term id NCIT:C12472 Tissue category Adipose ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,131,962 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_brite_adipose-Loft2014_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 21175a4a942d920e6083c64a95ba2392 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_brite_adipose-Loft2014_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contac tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_brite_adipose-Loft2014_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Co Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/brite_adipose-Loft2014_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/brite_adipose-Loft2014_EnhancerPredictionsFull.txt.lift Raw file md5 567faad5f8b8baf04978709fa5064c8a Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=brite_adipose-Loft2014;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Loft 2014;biosample_type_note=done;source_pubmed=25504365;source_doi=https://doi.org/10.1101/gad.25082 system category Integumentary life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Adipose ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCMQPJCCUD6 Download track View in genome browser Nasser_2021_ABC_enhancer_gene Trophoblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCMQPJCCUD6 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,280 bp covered 28,096,164 Output type enhancer-gene interactions Genome build hg38 cell type Trophoblast Biosample type Embryonic stem cell derived Biosamples term id UBERON:0000088 Tissue category Embryo ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,968,849 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 2556b0935e5bab44d86c57a4977ae874 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_202 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H1_BMP4_Derived_Trophoblast Raw file md5 c83a3ab8daca904f029bc76c259aaa36 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https:/ system category Embryo life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Trophoblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCMRGA223I4 Download track View in genome browser Nasser_2021_ABC_enhancer_gene Fibroblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCMRGA223I4 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 55,776 bp covered 28,644,232 Output type enhancer-gene interactions Genome build hg38 cell type Fibroblast Biosample type Primary cell Biosamples term id CL:0000057 Tissue category Skin ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,747,483 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_fibroblast_of_dermis-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 5b6ce846c54b46f37aa007a3dfcae6e6 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_fibroblast_of_dermis-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by- tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_fibroblast_of_dermis-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/fibroblast_of_dermis-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/fibroblast_of_dermis-Roadmap_EnhancerPredictionsF Raw file md5 2415121bd5f5a7dda849568e53fb14d3 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=fibroblast_of_dermis-Roadmap;tissue_of_origin=Dermis;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https system category Integumentary life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Fibroblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCMZRV4CRVV Download track View in genome browser Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCMZRV4CRVV Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 64,918 bp covered 21,572,556 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,426,929 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 44d0075124e5a99f77e179d5ec2e8d86 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nas tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_RPMI_1h-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocy Raw file md5 f2d4bc2fea8698b3149e307d76573bef Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_RPMI_1h-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;sour system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCO4R7VG3PO Download track View in genome browser Nasser_2021_ABC_enhancer_gene H9 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCO4R7VG3PO Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 56,510 bp covered 34,967,372 Output type enhancer-gene interactions Genome build hg38 cell type H9 Biosample type Primary cell Biosamples term id EFO:0003045 Tissue category Stem Cell ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,763,366 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H9-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 4f85b21ee474013724320e0dbfcb7934 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H9-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H9-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H9-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H9-Roadmap_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 aeeb47d88d149153fdcaa925e00c8b48 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=H9-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;abc_celltyp system category Stem Cell life stage Unknown trackName Nasser_2021_ABC_enhancer_gene H9 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCODYZER6CK Download track View in genome browser Nasser_2021_ABC_enhancer_gene H7-hESC ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCODYZER6CK Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,540 bp covered 29,119,467 Output type enhancer-gene interactions Genome build hg38 cell type H7-hESC Biosample type Embryonic stem cell derived Biosamples term id EFO:0005904 Tissue category Stem Cell ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,867,995 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H7_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 ae8c9fdc09dd8ba7de3b5121b4c63ca0 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H7_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_i tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H7_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H7_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H7_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 1cbb1716efb744f530b4d5403aef7774 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=H7;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=H7;biosample_type_note=needs revising;source_pubmed=24412311;source_doi=10.1016/j.stem.2013.12.007;abc_celltype_id=H7;data system category Stem Cell life stage Unknown trackName Nasser_2021_ABC_enhancer_gene H7-hESC ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCOLFRNRPTR Download track View in genome browser Nasser_2021_ABC_enhancer_gene T-helper cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCOLFRNRPTR Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 67,224 bp covered 24,081,860 Output type enhancer-gene interactions Genome build hg38 cell type T-helper cell Biosample type Primary cell Biosamples term id CL:0000912 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,545,228 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD4-positive_helper_T_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 19f80d4eeff4f6112bb41ae291248809 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD4-positive_helper_T_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Act tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD4-positive_helper_T_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD4-positive_helper_T_cell-Corces2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD4-positive_helper_T_cell-Corces2016_En Raw file md5 0c84a2411638c823eedea4e8b1f4cef7 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD4-positive_helper_T_cell-Corces2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Corces 2016;biosample_type_note=needs revising;source_pubmed=27526324;source_doi=https: system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene T-helper cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCP64BDAYVH Download track View in genome browser Nasser_2021_ABC_enhancer_gene Cardiac muscle cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCP64BDAYVH Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 52,270 bp covered 24,412,979 Output type enhancer-gene interactions Genome build hg38 cell type Cardiac muscle cell Biosample type In vitro differentiated cells Biosamples term id CL:0000746 Tissue category Heart ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,502,901 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_cardiac_muscle_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 0c66a24cb7bdf04e97bcd6cd319d16a5 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_cardiac_muscle_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Co tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_cardiac_muscle_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-b Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/cardiac_muscle_cell-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/cardiac_muscle_cell-ENCODE_EnhancerPredictionsFull. Raw file md5 58bccba81ceb75e55a7ea25b4ef679ec Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=cardiac_muscle_cell-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11 system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Cardiac muscle cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCPCP7E2WQL Download track View in genome browser Nasser_2021_ABC_enhancer_gene MCF 10A ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCPCP7E2WQL Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,742 bp covered 31,842,441 Output type enhancer-gene interactions Genome build hg38 cell type MCF 10A Biosample type Cell line Biosamples term id EFO:0001200 Tissue category Female Reproductive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,196,278 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF10A-Ji2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 105d5e3a15c64b63cca1c3f05ae36d7e wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF10A-Ji2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF10A-Ji2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MCF10A-Ji2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MCF10A-Ji2017_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 6b9b2d901abf7434f0c45c89beca13a0 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=MCF10A-Ji2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Ji2017;biosample_type_note=needs revising;source_pubmed=29802342;source_doi=https://doi.org/10.1038/s41467-018- system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene MCF 10A ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCPEC7NPH6C Download track View in genome browser Nasser_2021_ABC_enhancer_gene Gastrocnemius medialis ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCPEC7NPH6C Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,516 bp covered 43,715,288 Output type enhancer-gene interactions Genome build hg38 cell type Gastrocnemius medialis Biosample type Tissue Biosamples term id UBERON:0011907 Tissue category Skeletal Muscle ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,330,991 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_gastrocnemius_medialis-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 2f6b75c7c96b9a0fca3726862ecf6d1e wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_gastrocnemius_medialis-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_gastrocnemius_medialis-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activit Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/gastrocnemius_medialis-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/gastrocnemius_medialis-ENCODE_EnhancerPrediction Raw file md5 148d3267f5f2ad6785bbc31691f31c28 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=gastrocnemius_medialis-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/natur system category Muscular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Gastrocnemius medialis ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCPFRTUN37I Download track View in genome browser Nasser_2021_ABC_enhancer_gene Trophoblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCPFRTUN37I Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 57,150 bp covered 31,770,120 Output type enhancer-gene interactions Genome build hg38 cell type Trophoblast Biosample type Primary cell Biosamples term id UBERON:0000088 Tissue category Embryo ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,841,791 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_trophoblast_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 ea70907b6323c39276ba88c95d134811 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_trophoblast_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Conta tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_trophoblast_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-C Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/trophoblast_cell-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/trophoblast_cell-ENCODE_EnhancerPredictionsFull.txt.li Raw file md5 e7cd05996f8d841d377ceb339ffe1e7b Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=trophoblast_cell-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247 system category Embryo life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Trophoblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCPGI4I7QET Download track View in genome browser Nasser_2021_ABC_enhancer_gene Spinal cord ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCPGI4I7QET Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 57,372 bp covered 48,227,458 Output type enhancer-gene interactions Genome build hg38 cell type Spinal cord Biosample type Primary tissue Biosamples term id UBERON:0002240 Tissue category Nervous ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,928,885 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_spinal_cord_fetal-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 942ec101cc7a35f6a6d02c1f1b1131b7 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_spinal_cord_fetal-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Cont tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_spinal_cord_fetal-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by- Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/spinal_cord_fetal-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/spinal_cord_fetal-ENCODE_EnhancerPredictionsFull.txt. Raw file md5 080c1ba35bf83bf757a767963eee4b23 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=spinal_cord_fetal-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature1124 system category Nervous life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Spinal cord ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCPGPDMCXK3 Download track View in genome browser Nasser_2021_ABC_enhancer_gene Myotube ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCPGPDMCXK3 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 60,122 bp covered 34,747,232 Output type enhancer-gene interactions Genome build hg38 cell type Myotube Biosample type Primary cell Biosamples term id CL:0002372 Tissue category Skeletal Muscle ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,140,754 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_myotube_originated_from_skeletal_muscle_myoblast-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 4c295275867145aa6e0df5e28bb4ec06 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_myotube_originated_from_skeletal_muscle_myoblast-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nass tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_myotube_originated_from_skeletal_muscle_myoblast-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/myotube_originated_from_skeletal_muscle_myoblast-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/myotube_originated_fr Raw file md5 01c271cee3baad637b83ad981eb14376 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=myotube_originated_from_skeletal_muscle_myoblast-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=h system category Muscular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Myotube ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCQ2VOV46D6 Download track View in genome browser Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCQ2VOV46D6 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,964 bp covered 17,273,478 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,087,101 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_2h_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 090eaf50b074dba78a052854e2df361f wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_2h_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mo tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_2h_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contac Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_2h_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_2h_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 090d01b5c789b98bf63173959395597d Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP_pmaLPS_ATAC_2h;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Nasser_2021;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/s system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCQA4JNIHPZ Download track View in genome browser Nasser_2021_ABC_enhancer_gene Karpas-422 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCQA4JNIHPZ Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,828 bp covered 44,979,266 Output type enhancer-gene interactions Genome build hg38 cell type Karpas-422 Biosample type Cell line Biosamples term id EFO:0005719 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,168,145 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Karpas-422-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 e6903a7de2844379725e543334f1ca19 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Karpas-422-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Karpas-422-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/Karpas-422-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/Karpas-422-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 c82a0fbc339bb3c32c759c9da0f24022 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=Karpas-422-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_c system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Karpas-422 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCQGMV5OMGK Download track View in genome browser Nasser_2021_ABC_enhancer_gene Jurkat ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCQGMV5OMGK Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 59,570 bp covered 16,891,528 Output type enhancer-gene interactions Genome build hg38 cell type Jurkat Biosample type Immortalized cell line Biosamples term id EFO:0002796 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,953,000 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Jurkat-Engreitz_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 6c62bdd9e988e542b16e435e18f16c76 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Jurkat-Engreitz_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Jurkat-Engreitz_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/Jurkat-Engreitz_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/Jurkat-Engreitz_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 8c885e951311abda26f97f3e250a6cb6 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=Jurkat-Engreitz;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Engreitz;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/s41586- system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Jurkat ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCR3WYS7VJ4 Download track View in genome browser Nasser_2021_ABC_enhancer_gene Thyroid gland ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCR3WYS7VJ4 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 59,436 bp covered 20,997,921 Output type enhancer-gene interactions Genome build hg38 cell type Thyroid gland Biosample type Tissue Biosamples term id UBERON:0002046 Tissue category Endocrine ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,015,420 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_thyroid_gland-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 2918ab2e927e67eebc73c237c05184fa wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_thyroid_gland-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_thyroid_gland-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Cont Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/thyroid_gland-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/thyroid_gland-ENCODE_EnhancerPredictionsFull.txt.lifted.b Raw file md5 a3e9b6dec7a64062afc70f3097a8cd62 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=thyroid_gland-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;ab system category Endocrine life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Thyroid gland ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCRDV543Q6P Download track View in genome browser Nasser_2021_ABC_enhancer_gene PC-9 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCRDV543Q6P Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 59,038 bp covered 32,361,842 Output type enhancer-gene interactions Genome build hg38 cell type PC-9 Biosample type Cell line Biosamples term id EFO:0002847 Tissue category Lung ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,893,772 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_PC-9-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 f07a3393087aef913d79f05dab409b0b wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_PC-9-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_PC-9-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/PC-9-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/PC-9-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 02d9006c7fbcdfcf6a91ecba4b6de117 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=PC-9-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_celltyp system category Respiratory life stage Unknown trackName Nasser_2021_ABC_enhancer_gene PC-9 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCRFEZV25S2 Download track View in genome browser Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCRFEZV25S2 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,668 bp covered 22,417,155 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,556,385 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 8bae0356345493987cee9b2cc84f3bd0 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasse tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/N Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_BG_4h-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte Raw file md5 fc3129e64022eb42c096ac79e76a3269 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_BG_4h-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;source system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCRG3NQHFOD Download track View in genome browser Nasser_2021_ABC_enhancer_gene CD4+ ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCRG3NQHFOD Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 67,782 bp covered 31,582,256 Output type enhancer-gene interactions Genome build hg38 cell type CD4+ Biosample type Primary cell Biosamples term id CL:0000492 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,568,431 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD4-positive_helper_T_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 eab33de2a4295574e1afbafc83f08d53 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD4-positive_helper_T_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activit tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD4-positive_helper_T_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Act Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD4-positive_helper_T_cell-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD4-positive_helper_T_cell-ENCODE_EnhancerPr Raw file md5 2884fc5efc67d7602847d46b7c882c8a Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD4-positive_helper_T_cell-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/n system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD4+ ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCRMWCQ3BGV Download track View in genome browser Nasser_2021_ABC_enhancer_gene U-937 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCRMWCQ3BGV Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,492 bp covered 17,729,595 Output type enhancer-gene interactions Genome build hg38 cell type U-937 Biosample type Cell line Biosamples term id EFO:0001257 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,065,888 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_U937_LPS_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 7c32bf195824e5a749c538e2d12051ba wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_U937_LPS_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_U937_LPS_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Con Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/U937_LPS_4hr-Engreitz_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/U937_LPS_4hr-Engreitz_EnhancerPredictionsFull.txt.lifted Raw file md5 64abced1b122bbc048d26a8b588bf6c0 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=U937_LPS_4hr-Engreitz;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Engreitz;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/s system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene U-937 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCS77XVHU5Z Download track View in genome browser Nasser_2021_ABC_enhancer_gene CD19+ B cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCS77XVHU5Z Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,826 bp covered 39,924,810 Output type enhancer-gene interactions Genome build hg38 cell type CD19+ B cell Biosample type Primary cell Biosamples term id CL:0001201 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,536,637 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD19-positive_B_cell-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 f8aaad15046f6f709a4f5fa45412d4bd wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD19-positive_B_cell-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by- tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD19-positive_B_cell-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD19-positive_B_cell-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD19-positive_B_cell-Roadmap_EnhancerPredictionsF Raw file md5 3d0235b18b4ea89e9aaa0156340d0b1c Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD19-positive_B_cell-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/natur system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD19+ B cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCSLATK55PG Download track View in genome browser Nasser_2021_ABC_enhancer_gene Skeletal muscle tissue ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCSLATK55PG Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 59,108 bp covered 40,133,927 Output type enhancer-gene interactions Genome build hg38 cell type Skeletal muscle tissue Biosample type Primary cell Biosamples term id UBERON:0001134 Tissue category Skeletal Muscle ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,077,168 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_muscle_of_trunk_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 d6de299cabebeec97b1f967808a2ece4 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_muscle_of_trunk_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_muscle_of_trunk_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activit Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/muscle_of_trunk_fetal-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/muscle_of_trunk_fetal-Roadmap_EnhancerPrediction Raw file md5 68ea938c36b12d7c109146f96a7ea568 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=muscle_of_trunk_fetal-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/natu system category Muscular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Skeletal muscle tissue ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCSNJSJBFAF Download track View in genome browser Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCSNJSJBFAF Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,730 bp covered 17,198,081 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,102,396 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_12h_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 59620c6dafdaa88bcf3d9818b7129730 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_12h_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_12h_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Conta Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_12h_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_12h_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 b4bcd3eb297629b9272749048cae7c95 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP_pmaLPS_ATAC_12h;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Nasser_2021;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/ system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCSTF5YYTG6 Download track View in genome browser Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCSTF5YYTG6 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,840 bp covered 21,652,133 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,592,412 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_d6-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 b7838741929c43976ebe84791c706660 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_d6-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nass tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_d6-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_LPS_d6-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyt Raw file md5 f2216bfa804ad48f5d17988757b08cc3 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_LPS_d6-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;sourc system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
NGABCTBYSX6KJJ Download track View in genome browser Nasser_2021_ABC_enhancer_gene MCF 10A ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]
Show metadata Identifier NGABCTBYSX6KJJ Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,804 bp covered 32,942,054 Output type enhancer-gene interactions Genome build hg38 cell type MCF 10A Biosample type Cell line Biosamples term id EFO:0001200 Tissue category Female Reproductive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,200,589 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF10A_treated_with_TAM24hr-Ji2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 b52e093fce78b6a9de072de27a8f6f54 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF10A_treated_with_TAM24hr-Ji2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activi tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MCF10A_treated_with_TAM24hr-Ji2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Ac Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MCF10A_treated_with_TAM24hr-Ji2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MCF10A_treated_with_TAM24hr-Ji2017_Enhancer Raw file md5 e0d475fbfbb3713f8d427b695eed6963 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=MCF10A_treated_with_TAM24hr-Ji2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Ji2017;biosample_type_note=needs revising;source_pubmed=29802342;source_doi=https://doi.or system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene MCF 10A ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Chromatin interactions]