NGABC2D7Z2KLW2 Download track Nasser_2021_ABC_enhancer_gene Fibroblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC2D7Z2KLW2 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,114 bp covered 30,331,667 Output type enhancer-gene interactions Genome build hg38 cell type Fibroblast Biosample type Primary cell Biosamples term id CL:0000057 Tissue category Skin ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,101,710 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_foreskin_fibroblast-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 177e333cd36ff93abffc7405d583d495 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_foreskin_fibroblast-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-C tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_foreskin_fibroblast-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity- Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/foreskin_fibroblast-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/foreskin_fibroblast-Roadmap_EnhancerPredictionsFul Raw file md5 2da6b3c951cb729961fab941538ec1d9 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=foreskin_fibroblast-Roadmap;tissue_of_origin=Foreskin;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=http system category Integumentary life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Fibroblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC2UV65LQMB Download track Nasser_2021_ABC_enhancer_gene GM12878 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC2UV65LQMB Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,850 bp covered 36,934,330 Output type enhancer-gene interactions Genome build hg38 cell type GM12878 Biosample type Primary cell Biosamples term id EFO:0002784 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,470,014 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_GM12878-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 a33193c35d18717c70d0e5edd4384d5d wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_GM12878-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_GM12878-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/GM12878-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/GM12878-Roadmap_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 0e8d3a48e51dd507477e8ce4b87ad897 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=GM12878-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;abc_ce system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene GM12878 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC3ZERRDFRI Download track Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC3ZERRDFRI Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 65,820 bp covered 21,446,224 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,498,211 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 b94e73d5ad2b8e070d5433445490a616 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasse tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_BG_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/N Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_BG_1h-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte Raw file md5 e96aecfccbb076f105ff0651c2b45897 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_BG_1h-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;source system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC3ZGAHR6YE Download track Nasser_2021_ABC_enhancer_gene CD8+ alpha-beta T cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC3ZGAHR6YE Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 68,002 bp covered 23,549,195 Output type enhancer-gene interactions Genome build hg38 cell type CD8+ alpha-beta T cell Biosample type Primary cell Biosamples term id CL:0000625 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,621,591 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD8-positive_alpha-beta_T_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 eea1e0e10e1d352d0fa21c7fbd95ba98 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD8-positive_alpha-beta_T_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD8-positive_alpha-beta_T_cell-Corces2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD8-positive_alpha-beta_T_cell-Corces2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD8-positive_alpha-beta_T_cell-Corce Raw file md5 9ad5fe7fe6c1b96dcb4d4dff24aeed37 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD8-positive_alpha-beta_T_cell-Corces2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Corces2016;biosample_type_note=needs revising;source_pubmed=27526324;source_doi=htt system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD8+ alpha-beta T cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC46FJBPY2P Download track Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC46FJBPY2P Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 60,226 bp covered 19,546,593 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,962,892 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_48h_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 7133d3361c21aee33afb2ca9dca8238c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_48h_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_48h_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Conta Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_48h_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_48h_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 53f12bc64ef1c987a23b93ff389c75b4 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP_pmaLPS_ATAC_48h;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Nasser_2021;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/ system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC47T3XCDPI Download track Nasser_2021_ABC_enhancer_gene T-cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC47T3XCDPI Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 65,766 bp covered 50,919,318 Output type enhancer-gene interactions Genome build hg38 cell type T-cell Biosample type Primary cell Biosamples term id CL:0000084 Tissue category Immune ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,420,630 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_T-cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 946cb6f24f301af3ae28a95e4d3a7730 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_T-cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_T-cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/T-cell-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/T-cell-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 dbc4db5a5006a15cf458791a53e1a1f1 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=T-cell-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cellt system category Lymphatic life stage Unknown trackName Nasser_2021_ABC_enhancer_gene T-cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC4V5ACZFNG Download track Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC4V5ACZFNG Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,058 bp covered 16,756,061 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,829,324 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_96h_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 0502e5321ac3545064a5e7b15a08d2fd wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_96h_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_96h_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Conta Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_96h_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_96h_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 c1353a05d74a94d7bf7486b07eccea1c Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP_pmaLPS_ATAC_96h;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Nasser_2021;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/ system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC55Q6FSSK6 Download track Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC55Q6FSSK6 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,214 bp covered 21,968,247 Output type enhancer-gene interactions Genome build hg38 cell type Dendritic cell Biosample type In vitro differentiated cells Biosamples term id CL:0000451 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,253,456 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_0_ng-mL_for_0_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 159a3de6183ad4de9871c2e88c073b85 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_0_ng-mL_for_0_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtra tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_0_ng-mL_for_0_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotatio Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/dendritic_cell_treated_with_Lipopolysaccharide_0_ng-mL_for_0_hour-Garber2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/d Raw file md5 e9bd2f4adcccd6ba101df29b24341b81 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=dendritic_cell_treated_with_Lipopolysaccharide_0_ng-mL_for_0_hour-Garber2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Garber 2017;biosample_type_note=needs revising;s system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC5M3Z2LMSX Download track Nasser_2021_ABC_enhancer_gene Megakaryocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC5M3Z2LMSX Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,594 bp covered 22,382,453 Output type enhancer-gene interactions Genome build hg38 cell type Megakaryocyte Biosample type Primary cell Biosamples term id CL:0000556 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,156,528 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_megakaryocyte-erythroid_progenitor-Corces2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 1a2fecfb28e80bb136dbf43f50289757 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_megakaryocyte-erythroid_progenitor-Corces2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_megakaryocyte-erythroid_progenitor-Corces2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021 Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/megakaryocyte-erythroid_progenitor-Corces2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/megakaryocyte-erythroid_progenit Raw file md5 734041c745dab0d73ef57bfdf712ac07 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=megakaryocyte-erythroid_progenitor-Corces2016;tissue_of_origin=Peripheral blood;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Corces 2016;biosample_type_note=needs revisin system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Megakaryocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC5S7PMOP6M Download track Nasser_2021_ABC_enhancer_gene Sigmoid colon ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC5S7PMOP6M Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 64,098 bp covered 16,853,056 Output type enhancer-gene interactions Genome build hg38 cell type Sigmoid colon Biosample type Tissue Biosamples term id UBERON:0001159 Tissue category Digestive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,320,168 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_sigmoid_colon-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 7d498781c2730e47c03caab2d2fc8747 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_sigmoid_colon-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_sigmoid_colon-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Cont Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/sigmoid_colon-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/sigmoid_colon-ENCODE_EnhancerPredictionsFull.txt.lifted.b Raw file md5 6e5b50fb62addbb6b6e0fb461005d977 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=sigmoid_colon-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;ab system category Digestive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Sigmoid colon ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC5SNKMSOVC Download track Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC5SNKMSOVC Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 63,126 bp covered 21,828,782 Output type enhancer-gene interactions Genome build hg38 cell type Dendritic cell Biosample type In vitro differentiated cells Biosamples term id CL:0000451 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,332,980 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_1_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 0e9ca2ccfe8283659a14e359e0caf1d9 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_1_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationt tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_1_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotat Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_1_hour-Garber2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted Raw file md5 84a08e2e15c96fc72f53e79e86bdf43d Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_1_hour-Garber2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Garber 2017;biosample_type_note=needs revising system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC5U4PRCWYA Download track Nasser_2021_ABC_enhancer_gene Ovary ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC5U4PRCWYA Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,940 bp covered 39,079,770 Output type enhancer-gene interactions Genome build hg38 cell type Ovary Biosample type Primary cell Biosamples term id NCIT:C12404 Tissue category Female Reproductive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,214,325 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_ovary-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 6aefd69a37ed04970bb307d08ad4dd73 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_ovary-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_ovary-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/ovary-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/ovary-Roadmap_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 2c7a5f457a9249051d139756c0bd56d6 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=ovary-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;abc_cell system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Ovary ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC5UEZNJUWI Download track Nasser_2021_ABC_enhancer_gene MDA-MB-231 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC5UEZNJUWI Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,544 bp covered 37,828,989 Output type enhancer-gene interactions Genome build hg38 cell type MDA-MB-231 Biosample type Cell line Biosamples term id EFO:0001209 Tissue category Breast ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,140,594 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MDA-MB-231_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 8ed2019ba6b69c22a3163f95c4a8f1f0 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MDA-MB-231_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MDA-MB-231_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MDA-MB-231_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MDA-MB-231_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 96e3a8ad198387bd7b7af07e17acf4ac Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=MDA-MB-231;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Ampuja2017;biosample_type_note=needs revising;source_pubmed=28077088;source_doi=10.1186/s12864-016-3428-1;abc_cell system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene MDA-MB-231 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC5XI5U7RF3 Download track Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC5XI5U7RF3 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,500 bp covered 23,549,235 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,588,848 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 a6349673a5b621bd964761cd32126f1c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nass tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_1h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_LPS_1h-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyt Raw file md5 c23fe45797907c5e8103efe540669f79 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_LPS_1h-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;sourc system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC5YHYC42NK Download track Nasser_2021_ABC_enhancer_gene Adrenal gland ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC5YHYC42NK Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 64,184 bp covered 33,796,090 Output type enhancer-gene interactions Genome build hg38 cell type Adrenal gland Biosample type Primary tissue Biosamples term id UBERON:0002369 Tissue category Endocrine ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,338,993 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adrenal_gland_fetal-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 c8852785b38f773fbf1bdd37959a27c3 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adrenal_gland_fetal-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Co tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_adrenal_gland_fetal-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-b Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/adrenal_gland_fetal-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/adrenal_gland_fetal-ENCODE_EnhancerPredictionsFull. Raw file md5 bf0130a4983b21f48b31cc9d15b600a1 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=adrenal_gland_fetal-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11 system category Endocrine life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Adrenal gland ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC5ZJC7JSIE Download track Nasser_2021_ABC_enhancer_gene Small intestine ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC5ZJC7JSIE Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 68,334 bp covered 36,733,911 Output type enhancer-gene interactions Genome build hg38 cell type Small intestine Biosample type Primary tissue Biosamples term id UBERON:0002108 Tissue category Digestive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,626,092 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_small_intestine_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 d44203b3b204322c754da984d69bebe6 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_small_intestine_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_small_intestine_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activit Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/small_intestine_fetal-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/small_intestine_fetal-Roadmap_EnhancerPrediction Raw file md5 d7bd03b47edb67c8f5ad94d3d8b8bf2c Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=small_intestine_fetal-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/natu system category Digestive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Small intestine ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC6DYSG7EY5 Download track Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC6DYSG7EY5 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 59,792 bp covered 17,221,194 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,943,809 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_24h_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 c985cf13670790d480b9b01b627c7325 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_24h_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_24h_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Conta Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_24h_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_24h_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 378c0c7072b1f0ec18d1ba5d6d8bfffb Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP_pmaLPS_ATAC_24h;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Nasser_2021;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/ system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC6MGI2FXQQ Download track Nasser_2021_ABC_enhancer_gene HeLa-S3 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC6MGI2FXQQ Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,858 bp covered 27,484,223 Output type enhancer-gene interactions Genome build hg38 cell type HeLa-S3 Biosample type Primary cell Biosamples term id EFO:0002791 Tissue category Female Reproductive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,879,035 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_HeLa-S3-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 e81729a084786bf2215e282d239d1f9c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_HeLa-S3-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_HeLa-S3-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_m Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/HeLa-S3-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/HeLa-S3-Roadmap_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 91bf20b10e5d15aaac3f62a39a9c7878 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=HeLa-S3-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;abc_ce system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene HeLa-S3 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABC7O435CTJM Download track Nasser_2021_ABC_enhancer_gene BJAB ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABC7O435CTJM Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 55,468 bp covered 16,622,715 Output type enhancer-gene interactions Genome build hg38 cell type BJAB Biosample type Cell line Biosamples term id EFO:0002815 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,691,218 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_BJAB_anti-IgM_anti-CD40_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 b7350476671fcb7d70a524c842d59ed2 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_BJAB_anti-IgM_anti-CD40_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Acti tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_BJAB_anti-IgM_anti-CD40_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/BJAB_anti-IgM_anti-CD40_4hr-Engreitz_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/BJAB_anti-IgM_anti-CD40_4hr-Engreitz_Enha Raw file md5 bd100a1d78501834266afc0b790cab94 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=BJAB_anti-IgM_anti-CD40_4hr-Engreitz;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Engreitz;biosample_type_note=done;source_pubmed=33828297;source_doi=https://doi.org/10.1 system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene BJAB ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCA2PM3HCM7 Download track Nasser_2021_ABC_enhancer_gene Pancreas ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCA2PM3HCM7 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 65,348 bp covered 45,566,907 Output type enhancer-gene interactions Genome build hg38 cell type Pancreas Biosample type Tissue Biosamples term id UBERON:0001264 Tissue category Digestive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,459,275 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_body_of_pancreas-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 dbc72a432e86d9236d3e45db4fd5057c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_body_of_pancreas-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Conta tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_body_of_pancreas-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-C Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/body_of_pancreas-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/body_of_pancreas-ENCODE_EnhancerPredictionsFull.txt.li Raw file md5 c8306dd7c1533043ca0f26cbff87da1e Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=body_of_pancreas-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247 system category Digestive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Pancreas ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCA32L575OE Download track Nasser_2021_ABC_enhancer_gene HCT116 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCA32L575OE Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 65,424 bp covered 33,619,250 Output type enhancer-gene interactions Genome build hg38 cell type HCT116 Biosample type Cell line Biosamples term id EFO:0002824 Tissue category Digestive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,348,604 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_HCT116-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 e5a8fef95c16d9d1ec19b9c6450dd525 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_HCT116-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_HCT116-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/HCT116-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/HCT116-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 5ea8e5f3eae57ac276978a1a7d2d4219 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=HCT116-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cellt system category Digestive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene HCT116 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCA7V2JFOTF Download track Nasser_2021_ABC_enhancer_gene Liver ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCA7V2JFOTF Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 68,160 bp covered 26,052,863 Output type enhancer-gene interactions Genome build hg38 cell type Liver Biosample type Tissue Biosamples term id UBERON:0002107 Tissue category Liver ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,550,327 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_liver-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 eef4a5db6fc0a2e1f812039b0a0b0a0c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_liver-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/be tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_liver-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mode Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/liver-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/liver-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 9118be46f0f69ce7eb2a5e0669955b54 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=liver-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cellty system category Digestive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Liver ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCAEEBKNW7R Download track Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCAEEBKNW7R Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,594 bp covered 18,008,686 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,162,943 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP1_LPS_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 7ad17a757a691bb04a8dd0bf29be7567 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP1_LPS_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP1_LPS_4hr-Engreitz_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Con Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP1_LPS_4hr-Engreitz_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP1_LPS_4hr-Engreitz_EnhancerPredictionsFull.txt.lifted Raw file md5 19acdb1bcdeec64616222a920f5d83f2 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP1_LPS_4hr-Engreitz;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Engreitz;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/s system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCAVK6V6OW4 Download track Nasser_2021_ABC_enhancer_gene NCCIT ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCAVK6V6OW4 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 55,100 bp covered 15,548,209 Output type enhancer-gene interactions Genome build hg38 cell type NCCIT Biosample type Cell line Biosamples term id Not available Tissue category Male Reproductive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,611,442 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_NCCIT_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 e7262859b01851fa127610889b609e92 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_NCCIT_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus1 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_NCCIT_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4p Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/NCCIT_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/NCCIT_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 8abf9021d2f68cba3d3f51a6b3fd8fde Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=NCCIT;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=NCCIT;biosample_type_note=needs revising;source_pubmed=31784727;source_doi=10.1038/s41588-019-0538-0;abc_celltype_id=NC system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene NCCIT ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCAWXGO5T24 Download track Nasser_2021_ABC_enhancer_gene MM.1S ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCAWXGO5T24 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,214 bp covered 40,102,453 Output type enhancer-gene interactions Genome build hg38 cell type MM.1S Biosample type Cell line Biosamples term id EFO:0005724 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,172,414 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MM.1S-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 0dff612f48ff47baff2a4a7bcd487a8f wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MM.1S-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/be tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_MM.1S-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mode Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MM.1S-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/MM.1S-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 dc9e1e28150ef1f1c8a9e4b4f29b7e7c Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=MM.1S-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cellty system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene MM.1S ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCAXICEYZLR Download track Nasser_2021_ABC_enhancer_gene Macrophage ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCAXICEYZLR Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 52,846 bp covered 14,972,467 Output type enhancer-gene interactions Genome build hg38 cell type Macrophage Biosample type Cell line Biosamples term id CL:0000235 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,475,010 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP-1_macrophage-VanBortle2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 996f72f6164631a8126e5ff35c249f06 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP-1_macrophage-VanBortle2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP-1_macrophage-VanBortle2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activi Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP-1_macrophage-VanBortle2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP-1_macrophage-VanBortle2017_EnhancerPredicti Raw file md5 ce49b18b66d17ea1ea43852ae101509a Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP-1_macrophage-VanBortle2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=VanBortle 2017;biosample_type_note=needs revising;source_pubmed=28931413;source_doi=https://do system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Macrophage ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCAYLX6P3HO Download track Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCAYLX6P3HO Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,862 bp covered 18,341,705 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,088,811 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_0h_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 3efad20430ec40caf80b18f37561d1a8 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_0h_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mo tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_0h_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contac Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_0h_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_0h_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 c975f1e3bf6c143f3c8aeed208d53fee Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP_pmaLPS_ATAC_0h;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Nasser_2021;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/s system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCAZZ67IZ6U Download track Nasser_2021_ABC_enhancer_gene Spleen ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCAZZ67IZ6U Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,804 bp covered 22,628,049 Output type enhancer-gene interactions Genome build hg38 cell type Spleen Biosample type Tissue Biosamples term id UBERON:0002106 Tissue category Immune Organ ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,180,073 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_spleen-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 baec65aa2b01c02eb78738345c7676ac wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_spleen-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_spleen-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/spleen-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/spleen-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 94cdc3143c0191fb28b6b2dadaaa7c70 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=spleen-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cellt system category Lymphatic life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Spleen ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCB6DDJ2HDH Download track Nasser_2021_ABC_enhancer_gene Psoas muscle ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCB6DDJ2HDH Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,950 bp covered 34,604,575 Output type enhancer-gene interactions Genome build hg38 cell type Psoas muscle Biosample type Primary tissue Biosamples term id UBERON:0008450 Tissue category Skeletal Muscle ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,171,684 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_psoas_muscle-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 8d1712094d0db0d82f771b5b0f26974c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_psoas_muscle-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_psoas_muscle-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Cont Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/psoas_muscle-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/psoas_muscle-Roadmap_EnhancerPredictionsFull.txt.lifted.b Raw file md5 54313c8638e9d52f817d9d24796baaed Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=psoas_muscle-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;a system category Muscular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Psoas muscle ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCBFPKD2UDP Download track Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCBFPKD2UDP Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 65,180 bp covered 21,893,271 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,476,328 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 988e974047eb3186c396b6ce2d723d9b wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nass tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_LPS_d1-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyt Raw file md5 2150e3f06ef16f3cf788ccbc83ba9c93 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_LPS_d1-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;sourc system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCBXGQE472R Download track Nasser_2021_ABC_enhancer_gene Neural progenitor cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCBXGQE472R Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 57,924 bp covered 38,142,527 Output type enhancer-gene interactions Genome build hg38 cell type Neural progenitor cell Biosample type Primary cell Biosamples term id CL:0011020 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,023,767 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_Derived_Neuronal_Progenitor_Cultured_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 78fbbea5edc0cf7fcd5c4d6445e5d535 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_Derived_Neuronal_Progenitor_Cultured_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_Derived_Neuronal_Progenitor_Cultured_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nas Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H1_Derived_Neuronal_Progenitor_Cultured_Cells-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H1_Derived_Neuronal_Prog Raw file md5 2204777b051eb473383502d7fd04f636 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=H1_Derived_Neuronal_Progenitor_Cultured_Cells-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=http system category Nervous life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Neural progenitor cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCBYMTNVP6S Download track Nasser_2021_ABC_enhancer_gene Endothelial cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCBYMTNVP6S Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,706 bp covered 35,731,872 Output type enhancer-gene interactions Genome build hg38 cell type Endothelial cell Biosample type Primary cell Biosamples term id CL:0000115 Tissue category Umbilical Cord ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,177,121 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_endothelial_cell_of_umbilical_vein-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 dd487c02dec332b76ce696ad02e021f6 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_endothelial_cell_of_umbilical_vein-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/AB tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_endothelial_cell_of_umbilical_vein-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_AB Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/endothelial_cell_of_umbilical_vein-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/endothelial_cell_of_umbilical_vein- Raw file md5 6c2a7650401ac88750029cf396da7c2f Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=endothelial_cell_of_umbilical_vein-Roadmap;tissue_of_origin=Umbilical vein;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=256 system category Embryo life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Endothelial cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCCAHAZYR72 Download track Nasser_2021_ABC_enhancer_gene Skeletal muscle tissue ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCCAHAZYR72 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,436 bp covered 42,739,262 Output type enhancer-gene interactions Genome build hg38 cell type Skeletal muscle tissue Biosample type Primary cell Biosamples term id UBERON:0001134 Tissue category Skeletal Muscle ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,037,408 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_muscle_of_leg_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 787bc1206f981cb0f6bead758d25fb14 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_muscle_of_leg_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-C tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_muscle_of_leg_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity- Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/muscle_of_leg_fetal-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/muscle_of_leg_fetal-Roadmap_EnhancerPredictionsFul Raw file md5 3846c12eeeaca70f5147b5ad70d776d2 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=muscle_of_leg_fetal-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature system category Muscular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Skeletal muscle tissue ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCCH23HCQWY Download track Nasser_2021_ABC_enhancer_gene Ventricle ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCCH23HCQWY Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 64,742 bp covered 20,852,027 Output type enhancer-gene interactions Genome build hg38 cell type Ventricle Biosample type Tissue Biosamples term id NCIT:C12730 Tissue category Heart ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,342,671 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_heart_ventricle-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 c3e23ea59ae763e0c68cb9172cca7763 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_heart_ventricle-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contac tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_heart_ventricle-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Co Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/heart_ventricle-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/heart_ventricle-ENCODE_EnhancerPredictionsFull.txt.lift Raw file md5 d9531b0f9d6c2dcf51f7f7a9331e119a Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=heart_ventricle-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247; system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Ventricle ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCCLRUM7SMC Download track Nasser_2021_ABC_enhancer_gene U-937 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCCLRUM7SMC Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,386 bp covered 16,996,505 Output type enhancer-gene interactions Genome build hg38 cell type U-937 Biosample type Cell line Biosamples term id FF:10834-111D6 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,051,560 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_U937-Engreitz_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 9314f8866a717a5bd0ca4a54d5b7eff5 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_U937-Engreitz_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_U937-Engreitz_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/U937-Engreitz_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/U937-Engreitz_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 4b7be1af598b000916b0b00dd06236a4 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=U937-Engreitz;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Engreitz;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/s41586-02 system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene U-937 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCCPSAF33TL Download track Nasser_2021_ABC_enhancer_gene Smooth muscle cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCCPSAF33TL Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 53,438 bp covered 17,820,389 Output type enhancer-gene interactions Genome build hg38 cell type Smooth muscle cell Biosample type Primary cell Biosamples term id CL:0000192 Tissue category Blood Vessel ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,600,428 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_coronary_artery_smooth_muscle_cell-Miller2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 5d28d364771b2fdd112d2e0d44c25f7d wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_coronary_artery_smooth_muscle_cell-Miller2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_coronary_artery_smooth_muscle_cell-Miller2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021 Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/coronary_artery_smooth_muscle_cell-Miller2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/coronary_artery_smooth_muscle_ce Raw file md5 3f779385540e156df10bf12267e1aba3 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=coronary_artery_smooth_muscle_cell-Miller2016;tissue_of_origin=Coronary artery;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Miller 2016;biosample_type_note=needs revising system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Smooth muscle cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCCTJ6NR3GG Download track Nasser_2021_ABC_enhancer_gene Epithelium ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCCTJ6NR3GG Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 69,658 bp covered 26,870,710 Output type enhancer-gene interactions Genome build hg38 cell type Epithelium Biosample type Tissue Biosamples term id NCIT:C12710 Tissue category Breast ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,715,036 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_breast_epithelium-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 5b34b205a71d275cd4faf4298b222bea wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_breast_epithelium-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Cont tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_breast_epithelium-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by- Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/breast_epithelium-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/breast_epithelium-ENCODE_EnhancerPredictionsFull.txt. Raw file md5 6e761008e09a1324a63d8655c0b7561d Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=breast_epithelium-ENCODE;tissue_of_origin=Breast;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://do system category Reproductive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Epithelium ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCDEZH6BU5U Download track Nasser_2021_ABC_enhancer_gene CD8+ alpha-beta T cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCDEZH6BU5U Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 67,336 bp covered 39,653,730 Output type enhancer-gene interactions Genome build hg38 cell type CD8+ alpha-beta T cell Biosample type Primary cell Biosamples term id CL:0000625 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,635,215 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD8-positive_alpha-beta_T_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 aa23210f71411417e3a7baf0835fdaf3 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD8-positive_alpha-beta_T_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Act tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD8-positive_alpha-beta_T_cell-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD8-positive_alpha-beta_T_cell-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD8-positive_alpha-beta_T_cell-ENCODE_En Raw file md5 6592ddcec853d0d439221bf26e24bad0 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD8-positive_alpha-beta_T_cell-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.10 system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD8+ alpha-beta T cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCDHGBNARTH Download track Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCDHGBNARTH Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,926 bp covered 24,484,351 Output type enhancer-gene interactions Genome build hg38 cell type Dendritic cell Biosample type In vitro differentiated cells Biosamples term id CL:0000451 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,263,666 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_2_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 eb4494a21b578ad16237bd7004fa92c8 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_2_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationt tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_2_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotat Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_2_hour-Garber2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted Raw file md5 ba3302220f1e7fd1b1d61ae3b1b60416 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_2_hour-Garber2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Garber 2017;biosample_type_note=needs revising system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCDM32NKH7V Download track Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCDM32NKH7V Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 62,470 bp covered 17,981,159 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,129,114 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_1h_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 d83968aebd888b16cd240f798dffe845 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_1h_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mo tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP_pmaLPS_ATAC_1h_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contac Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_1h_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP_pmaLPS_ATAC_1h_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 9bf524b4e76f724b56a78610dbce6411 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP_pmaLPS_ATAC_1h;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Nasser_2021;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/s system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCE5IL3WPQV Download track Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCE5IL3WPQV Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,446 bp covered 17,649,088 Output type enhancer-gene interactions Genome build hg38 cell type THP-1 Biosample type Cell line Biosamples term id EFO:0001253 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,076,351 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP1-Engreitz_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 3d98428890c720f34bfa6140c7a61ac1 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP1-Engreitz_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/b tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_THP1-Engreitz_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mod Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP1-Engreitz_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/THP1-Engreitz_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 2138cb87233231ff1e6ab562664710c4 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=THP1-Engreitz;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Engreitz;biosample_type_note=needs revising;source_pubmed=33828297;source_doi=https://doi.org/10.1038/s41586-02 system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene THP-1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCE6ULAM5MW Download track Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCE6ULAM5MW Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 65,486 bp covered 25,573,644 Output type enhancer-gene interactions Genome build hg38 cell type Dendritic cell Biosample type In vitro differentiated cells Biosamples term id CL:0000451 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,529,836 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_6_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 9ebf1377ee61b053c8a2b98e042370da wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_6_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationt tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_6_hour-Garber2017_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotat Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_6_hour-Garber2017_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted Raw file md5 bd6b28ff978e1d882768e668dd316145 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_6_hour-Garber2017;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Garber 2017;biosample_type_note=needs revising system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Dendritic cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCFEBGQ5DOA Download track Nasser_2021_ABC_enhancer_gene T-cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCFEBGQ5DOA Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 67,200 bp covered 42,383,663 Output type enhancer-gene interactions Genome build hg38 cell type T-cell Biosample type Primary cell Biosamples term id CL:0000084 Tissue category Immune ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,538,164 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD3-positive_T_cell-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 1a525ed26a150efd459075e65cd1c6d7 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD3-positive_T_cell-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-C tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD3-positive_T_cell-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity- Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD3-positive_T_cell-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD3-positive_T_cell-Roadmap_EnhancerPredictionsFul Raw file md5 12d4fa41269d4e3b913ed45f653a4ba1 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD3-positive_T_cell-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature system category Lymphatic life stage Unknown trackName Nasser_2021_ABC_enhancer_gene T-cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCFGYRDMCWJ Download track Nasser_2021_ABC_enhancer_gene Mesenchymal stem cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCFGYRDMCWJ Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 58,252 bp covered 31,764,724 Output type enhancer-gene interactions Genome build hg38 cell type Mesenchymal stem cell Biosample type Primary cell Biosamples term id CL:0000134 Tissue category Stem Cell ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,995,180 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_Derived_Mesenchymal_Stem_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 d576cfa119d540b1902b3d47c92a7f21 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_Derived_Mesenchymal_Stem_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_H1_Derived_Mesenchymal_Stem_Cells-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H1_Derived_Mesenchymal_Stem_Cells-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/H1_Derived_Mesenchymal_Stem_Cells-Ro Raw file md5 16c5764c87d73d2751dda7c1f0671be0 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=H1_Derived_Mesenchymal_Stem_Cells-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/ system category Stem Cell life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Mesenchymal stem cell ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCFKHSTLBS7 Download track Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCFKHSTLBS7 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,262 bp covered 23,090,839 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,568,928 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 e60cf66660d475021d1290931943af80 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nas tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_RPMI_d1-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_RPMI_d1-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocy Raw file md5 6bfc47985862a69ee114ad16aaa1f63a Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_RPMI_d1-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;sour system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCFY6JXOITY Download track Nasser_2021_ABC_enhancer_gene Panc1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCFY6JXOITY Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 61,248 bp covered 31,998,380 Output type enhancer-gene interactions Genome build hg38 cell type Panc1 Biosample type Cell line Biosamples term id EFO:0002713 Tissue category Digestive ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,026,605 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Panc1-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 86e624be9f705c020054cb6a111a2550 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Panc1-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/be tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_Panc1-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mode Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/Panc1-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/Panc1-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 ebfdc628257b929464af3ffb0d1c5840 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=Panc1-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_cellty system category Digestive life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Panc1 ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCFZDSXJRPO Download track Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCFZDSXJRPO Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 66,382 bp covered 22,569,485 Output type enhancer-gene interactions Genome build hg38 cell type CD14+ monocyte Biosample type Cell Biosamples term id CL:0001054 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,579,146 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 509d71760f8d99e4f957908fab8d197a wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nass tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_CD14-positive_monocyte_treated_with_LPS_4h-Novakovic2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyte_treated_with_LPS_4h-Novakovic2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/CD14-positive_monocyt Raw file md5 43ec560ce83e59e152c9c1b5a27d6544 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=CD14-positive_monocyte_treated_with_LPS_4h-Novakovic2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Novakovic 2016;biosample_type_note=done;source_pubmed=27863248;sourc system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene CD14+ monocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCGAA5BE7FV Download track Nasser_2021_ABC_enhancer_gene Erythroblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCGAA5BE7FV Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 68,796 bp covered 22,631,560 Output type enhancer-gene interactions Genome build hg38 cell type Erythroblast Biosample type Primary cell Biosamples term id CL:0000765 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,575,847 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_erythroblast-Corces2016_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 08e9dd8da861befc75fea2c93cb49809 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_erythroblast-Corces2016_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Conta tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_erythroblast-Corces2016_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-C Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/erythroblast-Corces2016_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/erythroblast-Corces2016_EnhancerPredictionsFull.txt.li Raw file md5 172635227280216fd72ce8302b660a5b Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=erythroblast-Corces2016;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Corces2016;biosample_type_note=needs revising;source_pubmed=27526324;source_doi=https://doi.org/10.10 system category Cardiovascular life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Erythroblast ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCGLTTJBOZ6 Download track Nasser_2021_ABC_enhancer_gene Thymus ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCGLTTJBOZ6 Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 63,062 bp covered 40,836,408 Output type enhancer-gene interactions Genome build hg38 cell type Thymus Biosample type Primary tissue Biosamples term id UBERON:0002370 Tissue category Immune Organ ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 4,261,324 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_thymus_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 05da472bc4ef68f9463f26227043a9ec wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_thymus_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_thymus_fetal-Roadmap_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Cont Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/thymus_fetal-Roadmap_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/thymus_fetal-Roadmap_EnhancerPredictionsFull.txt.lifted.b Raw file md5 e3d97fdf001cf605b99e709f0d514d8e Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=thymus_fetal-Roadmap;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=Roadmap;biosample_type_note=done;source_pubmed=25693563;source_doi=https://doi.org/10.1038/nature14248;a system category Lymphatic life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Thymus ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
NGABCGLYDIFUPE Download track Nasser_2021_ABC_enhancer_gene Astrocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]
Show metadata Identifier NGABCGLYDIFUPE Data Source Nasser_2021_ABC_enhancer_gene Download track Download Number of intervals 54,598 bp covered 24,488,802 Output type enhancer-gene interactions Genome build hg38 cell type Astrocyte Biosample type Primary cell Biosamples term id CL:0000127 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ABC_[Activity-by-Contact_model] File format bed bed4+19 interact File size 3,637,283 Downloaded date 05/21/2021 Release date 03/07/2021 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_astrocyte-ENCODE_EnhancerPredictionsFull_lifted.bed.gz Processed file md5 e6696d08b34dadcea9dae2c3c97c9dbb wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_astrocyte-ENCODE_EnhancerPredictionsFull_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_mode tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_model/bed4plus19_interact/hg38/formatted_output_astrocyte-ENCODE_EnhancerPredictionsFull_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nasser_2021_ABC/ABC_Activity-by-Contact_ Link out URL https://www.engreitzlab.org/resources Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/astrocyte-ENCODE_EnhancerPredictionsFull.txt.lifted.bed -P FILER2/Annotationtracks/Downloads/Nasser_2021_ABC_enhancer_gene/lifted/astrocyte-ENCODE_EnhancerPredictionsFull.txt.lifted.bed Raw file md5 d8e31936b225310f4d4d7ab89964c8b7 Data Category Chromatin interactions Genomic feature type ABC_[Activity-by-Contact_model] enhancer-gene interactions Track Description Original_cell_type=astrocyte-ENCODE;doi=https://doi.org/10.1038/s41586-021-03446-x;pubmed_id=33828297;value_description=ABC.Score as product between contact frequency and enhancer;source_name=ENCODE;biosample_type_note=done;source_pubmed=22955616;source_doi=https://doi.org/10.1038/nature11247;abc_ce system category Nervous life stage Unknown trackName Nasser_2021_ABC_enhancer_gene Astrocyte ABC_[Activity-by-Contact_model] enhancer-gene interactions (bed4+19 interact) [Life stage: Unknown]