NGBEPEL4GLYM5OX3 Download track View in genome browser Nott_2019 Neuron Enhancer H3K27ac-histone-mark enhancer peaks (bed3-lifted) [Life stage: Adult, Child] [Enhancer]
Show metadata Identifier NGBEPEL4GLYM5OX3 Data Source Nott_2019 Download track Download Number of intervals 141,642 bp covered 130,290,144 Output type enhancer peaks Genome build hg38 cell type Neuron Biosample type Tissue Biosamples term id CL:0000540 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Enhancer File format bed bed3-lifted File size 2,302,799 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_NeuN_enhancers_lifted.bed.gz Processed file md5 9adca47b36ff7da3bfb0a78ad4d80e16 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_NeuN_enhancers_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_NeuN_enhancers_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/enhancers/NeuN_enhancers.sorted.bigBed -P FILER2/Annotationtracks/Downloads/Nott_2019/enhancers/NeuN_enhancers.sorted.bigBed Raw file md5 220511817dcfb6f010e3bfd50875a22b Data Category Enhancer Genomic feature type H3K27ac enhancer peaks Track Description Original_cell_type=neurons;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=R system category Nervous life stage Adult, Child trackName Nott_2019 Neuron Enhancer H3K27ac-histone-mark enhancer peaks (bed3-lifted) [Life stage: Adult, Child] [Enhancer]
NGBEPEL4PJUJAKTB Download track View in genome browser Nott_2019 PU.1+ Microglia Histone ChIP-seq H3K4me3 peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBEPEL4PJUJAKTB Data Source Nott_2019 Download track Download Number of intervals 20,198 bp covered 32,595,591 Output type peaks Genome build hg38 cell type PU.1+ Microglia Biosample type Tissue Biosamples term id CL:0000129 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K4me3 Assay Histone ChIP-seq File format bed bed3-lifted File size 355,521 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz Processed file md5 f92f4fd2120e31029a90242f93fc8053 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/H3K4me3/PU1_optimal_peak_IDR_ENCODE.H3K4me3.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K4me3/PU1_optimal_peak_IDR_ENCODE.H3K4me3.sorted.bigBed.gz Raw file md5 7ff57c82eac5365d4ba73d1b36b08655 Data Category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K4me3 peaks Track Description Original_cell_type=PU1_optimal_peak_IDR_ENCODE.H3K4me3;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=4yo;sexes=M;ethnicities=His;brain_regions=Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic;acknowledgements=FILER2/Annotationtracks/hg38_lifted/Nott_2019/acknowle system category Nervous life stage Child trackName Nott_2019 PU.1+ Microglia Histone ChIP-seq H3K4me3 peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
NGBEPELCBNAG2EFC Download track View in genome browser Nott_2019 Neuron Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Adult, Child] [Enhancer]
Show metadata Identifier NGBEPELCBNAG2EFC Data Source Nott_2019 Download track Download Number of intervals 1,170 bp covered 98,328,897 Output type super-enhancer peaks Genome build hg38 cell type Neuron Biosample type Tissue Biosamples term id CL:0000540 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Super-enhancer File format bed bed6-lifted File size 29,680 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_NEUN_superEnhancer_L1_lifted.bed.gz Processed file md5 7e0e8eb72bfe649022b85c472cf0ff4f wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_NEUN_superEnhancer_L1_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_NEUN_superEnhancer_L1_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/NEUN_superEnhancer_L1.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/NEUN_superEnhancer_L1.gz Raw file md5 c9e8e569c8137b41a055488b927275ea Data Category Enhancer Genomic feature type H3K27ac super-enhancer peaks Track Description Original_cell_type=neurons;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=R system category Nervous life stage Adult, Child trackName Nott_2019 Neuron Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Adult, Child] [Enhancer]
NGBEPELCYWMCR5BJ Download track View in genome browser Nott_2019 PU.1+ Microglia Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Adult, Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBEPELCYWMCR5BJ Data Source Nott_2019 Download track Download Number of intervals 48,791 bp covered 82,267,056 Output type peaks Genome build hg38 cell type PU.1+ Microglia Biosample type Tissue Biosamples term id CL:0000129 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Histone ChIP-seq File format bed bed3-lifted File size 822,603 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz Processed file md5 dcbea562195c6dc5e6592df34e88227e wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/PU1_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/PU1_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz Raw file md5 2eb92bd0cca0d176b2059df8a9847683 Data Category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac peaks Track Description Original_cell_type=PU1_optimal_peak_IDR_ENCODE.H3K27;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 18yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology, Residual ate system category Nervous life stage Adult, Child trackName Nott_2019 PU.1+ Microglia Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Adult, Child] [Histone ChIP-seq peaks]
NGBEPELDE7AUCBD4 Download track View in genome browser Nott_2019 Oligodendrocyte Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Adult, Child] [Enhancer]
Show metadata Identifier NGBEPELDE7AUCBD4 Data Source Nott_2019 Download track Download Number of intervals 1,152 bp covered 76,371,866 Output type super-enhancer peaks Genome build hg38 cell type Oligodendrocyte Biosample type Tissue Biosamples term id CL:0000128 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Super-enhancer File format bed bed6-lifted File size 29,170 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_OLIG2_superEnhancer_L1_lifted.bed.gz Processed file md5 3a9ffa8958fb78570266e2cb951eb6c3 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_OLIG2_superEnhancer_L1_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_OLIG2_superEnhancer_L1_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/OLIG2_superEnhancer_L1.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/OLIG2_superEnhancer_L1.gz Raw file md5 6d6ef51d95473ed9c6980986c55ecf02 Data Category Enhancer Genomic feature type H3K27ac super-enhancer peaks Track Description Original_cell_type=oligodendrocytes;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;patholo system category Nervous life stage Adult, Child trackName Nott_2019 Oligodendrocyte Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Adult, Child] [Enhancer]
NGBEPELH4UIPYVWM Download track View in genome browser Nott_2019 Neuron ATAC-seq accessible chromatin region (bed3-lifted) [Life stage: Child] [Accessible chromatin]
Show metadata Identifier NGBEPELH4UIPYVWM Data Source Nott_2019 Download track Download Number of intervals 55,932 bp covered 26,306,624 Output type accessible chromatin region Genome build hg38 cell type Neuron Biosample type Tissue Biosamples term id CL:0000540 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ATAC-seq File format bed bed3-lifted File size 943,524 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz Processed file md5 021f5f79663b653312674edba82d0333 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/ATAC/NeuN_optimal_peak_IDR_ENCODE.ATAC.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/ATAC/NeuN_optimal_peak_IDR_ENCODE.ATAC.sorted.bigBed.gz Raw file md5 001cd49abd5da350109e6c9eed7b8e56 Data Category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region Track Description Original_cell_type=NeuN_optimal_peak_IDR_ENCODE.ATAC;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 4yo, 8yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Temporal Cortex;pathologies_dx=Focal cortical dysplasia type IIa, Focal cortical dysplasia type Ic, Negative pathol system category Nervous life stage Child trackName Nott_2019 Neuron ATAC-seq accessible chromatin region (bed3-lifted) [Life stage: Child] [Accessible chromatin]
NGBEPELI5ERYXM7L Download track View in genome browser Nott_2019 Neuron Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Adult, Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBEPELI5ERYXM7L Data Source Nott_2019 Download track Download Number of intervals 148,066 bp covered 157,234,772 Output type peaks Genome build hg38 cell type Neuron Biosample type Tissue Biosamples term id CL:0000540 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Histone ChIP-seq File format bed bed3-lifted File size 2,416,796 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz Processed file md5 2b2caaea48f1970d0509c0615c7ad141 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/NeuN_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/NeuN_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz Raw file md5 67c6c2e06a3fe6497af988d5f0a89200 Data Category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac peaks Track Description Original_cell_type=NeuN_optimal_peak_IDR_ENCODE.H3K27;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 18yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology, Residual at system category Nervous life stage Adult, Child trackName Nott_2019 Neuron Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Adult, Child] [Histone ChIP-seq peaks]
NGBEPELJZCPD6ZU6 Download track View in genome browser Nott_2019 Astrocyte ATAC-seq accessible chromatin region (bed3-lifted) [Life stage: Child] [Accessible chromatin]
Show metadata Identifier NGBEPELJZCPD6ZU6 Data Source Nott_2019 Download track Download Number of intervals 52,436 bp covered 21,812,881 Output type accessible chromatin region Genome build hg38 cell type Astrocyte Biosample type Tissue Biosamples term id CL:0000127 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ATAC-seq File format bed bed3-lifted File size 879,849 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz Processed file md5 3114be2d4ea871dc1d150abfc9bf5cbb wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/ATAC/LHX2_optimal_peak_IDR_ENCODE.ATAC.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/ATAC/LHX2_optimal_peak_IDR_ENCODE.ATAC.sorted.bigBed.gz Raw file md5 5cc00f19995ccdb1bfd453840794abb6 Data Category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region Track Description Original_cell_type=LHX2_optimal_peak_IDR_ENCODE.ATAC;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=12yo, 14yo, 4yo;sexes=M;ethnicities=Caucasian, HIs, His;brain_regions=Frontal Cortex, Temporal Cortex;pathologies_dx=Cystic encephalomalacia , Focal cortical dysplasia type Ic, Ne system category Nervous life stage Child trackName Nott_2019 Astrocyte ATAC-seq accessible chromatin region (bed3-lifted) [Life stage: Child] [Accessible chromatin]
NGBEPELKO22X6KHC Download track View in genome browser Nott_2019 Astrocyte Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Child] [Enhancer]
Show metadata Identifier NGBEPELKO22X6KHC Data Source Nott_2019 Download track Download Number of intervals 460 bp covered 40,754,317 Output type super-enhancer peaks Genome build hg38 cell type Astrocyte Biosample type Tissue Biosamples term id CL:0000127 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Super-enhancer File format bed bed6-lifted File size 12,061 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_LHX2_superEnhancer_L1_lifted.bed.gz Processed file md5 1ceed625460a0038575b3fb312a81b7d wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_LHX2_superEnhancer_L1_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_LHX2_superEnhancer_L1_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/LHX2_superEnhancer_L1.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/LHX2_superEnhancer_L1.gz Raw file md5 8e0635a999a1fee313d4e48646a9dddc Data Category Enhancer Genomic feature type H3K27ac super-enhancer peaks Track Description Original_cell_type=astrocyte;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 12yo, 4yo;sexes=M;ethnicities=HIs, His, Caucasian;brain_regions=Temporal Cortex, Frontal Cortex;pathologie system category Nervous life stage Child trackName Nott_2019 Astrocyte Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Child] [Enhancer]
NGBEPELKVRL7TVOO Download track View in genome browser Nott_2019 Oligodendrocyte Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Adult, Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBEPELKVRL7TVOO Data Source Nott_2019 Download track Download Number of intervals 73,122 bp covered 106,184,364 Output type peaks Genome build hg38 cell type Oligodendrocyte Biosample type Tissue Biosamples term id CL:0000128 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Histone ChIP-seq File format bed bed3-lifted File size 1,220,856 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz Processed file md5 e02c0ff47978f0df61e6b214f0d8c075 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/Olig2_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/Olig2_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz Raw file md5 47dcef5d7d90621cea37887ec9b62bb8 Data Category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac peaks Track Description Original_cell_type=Olig2_optimal_peak_IDR_ENCODE.H3K27;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 18yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology, Residual a system category Nervous life stage Adult, Child trackName Nott_2019 Oligodendrocyte Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Adult, Child] [Histone ChIP-seq peaks]
NGBEPELLKCUVYQSF Download track View in genome browser Nott_2019 Oligodendrocyte Enhancer H3K27ac-histone-mark enhancer peaks (bed3-lifted) [Life stage: Adult, Child] [Enhancer]
Show metadata Identifier NGBEPELLKCUVYQSF Data Source Nott_2019 Download track Download Number of intervals 66,626 bp covered 80,769,948 Output type enhancer peaks Genome build hg38 cell type Oligodendrocyte Biosample type Tissue Biosamples term id CL:0000128 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Enhancer File format bed bed3-lifted File size 1,103,602 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Olig_enhancers_lifted.bed.gz Processed file md5 f50a9bd858ae376d3c86439a26ea17bd wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Olig_enhancers_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_Olig_enhancers_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/enhancers/Olig2_enhancers.sorted.bigBed -P FILER2/Annotationtracks/Downloads/Nott_2019/enhancers/Olig2_enhancers.sorted.bigBed Raw file md5 b8ac27702659800eef5ae21725412556 Data Category Enhancer Genomic feature type H3K27ac enhancer peaks Track Description Original_cell_type=oligodendrocytes;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;patholo system category Nervous life stage Adult, Child trackName Nott_2019 Oligodendrocyte Enhancer H3K27ac-histone-mark enhancer peaks (bed3-lifted) [Life stage: Adult, Child] [Enhancer]
NGBEPELMB5KOIJ77 Download track View in genome browser Nott_2019 PU.1+ Microglia PLAC-seq H3K4me3-histone-mark chromatin interactions (bed4+19 interact) [Life stage: Child] [Chromatin interactions]
Show metadata Identifier NGBEPELMB5KOIJ77 Data Source Nott_2019 Download track Download Number of intervals 209,462 bp covered 1,047,930,022 Output type chromatin interactions Genome build hg38 cell type PU.1+ Microglia Biosample type Tissue Biosamples term id CL:0000129 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K4me3 Assay PLAC-seq File format bed bed4+19 interact File size 5,078,905 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_Microglia_PLAC_seq_lifted.bed.gz Processed file md5 62cba4990f7f7d222c810fbfe81d1d82 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_Microglia_PLAC_seq_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_Microglia_PLAC_seq_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/PLAC/Microglia.5k.2.peaks_interactions_ucsc_genome_browser.inter.bed -P FILER2/Annotationtracks/Downloads/Nott_2019/PLAC/Microglia.5k.2.peaks_interactions_ucsc_genome_browser.inter.bed Raw file md5 1644aa6e30619631d51f3e32e3a04c45 Data Category Chromatin interactions Genomic feature type PLAC-seq H3K4me3 chromatin interactions Track Description Original_cell_type=microglia;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;value_description=value=score/1000;ages=17yo, 5mo, 7yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Frontal Cortex, Parietal Cortex, Temporal Cortex;pathologies_dx=Anoxic ischemic encephalopathy , Cortica system category Nervous life stage Child trackName Nott_2019 PU.1+ Microglia PLAC-seq H3K4me3-histone-mark chromatin interactions (bed4+19 interact) [Life stage: Child] [Chromatin interactions]
NGBEPELMCU66SP4A Download track View in genome browser Nott_2019 Oligodendrocyte PLAC-seq H3K4me3-histone-mark chromatin interactions (bed4+19 interact) [Life stage: Child] [Chromatin interactions]
Show metadata Identifier NGBEPELMCU66SP4A Data Source Nott_2019 Download track Download Number of intervals 123,720 bp covered 619,509,026 Output type chromatin interactions Genome build hg38 cell type Oligodendrocyte Biosample type Tissue Biosamples term id CL:0000128 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K4me3 Assay PLAC-seq File format bed bed4+19 interact File size 2,740,059 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_Olig_PLAC_seq_lifted.bed.gz Processed file md5 3c1513aa325204df9aa3d7b62c0a13cb wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_Olig_PLAC_seq_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_Olig_PLAC_seq_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/PLAC/Olig2.5k.2.peaks_interactions_ucsc_genome_browser.inter.bed -P FILER2/Annotationtracks/Downloads/Nott_2019/PLAC/Olig2.5k.2.peaks_interactions_ucsc_genome_browser.inter.bed Raw file md5 6d3da0354f58d89182e2706ad0f8c734 Data Category Chromatin interactions Genomic feature type PLAC-seq H3K4me3 chromatin interactions Track Description Original_cell_type=oligodendrocytes;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;value_description=value=score/1000;ages=14yo, 4yo, 6yo;sexes=F, M;ethnicities=Caucasian, His, Pacific Islander;brain_regions=Frontal Cortex, Temporal Cortex;pathologies_dx=Focal cortical dysplasia type system category Nervous life stage Child trackName Nott_2019 Oligodendrocyte PLAC-seq H3K4me3-histone-mark chromatin interactions (bed4+19 interact) [Life stage: Child] [Chromatin interactions]
NGBEPELO5LCQ5SXA Download track View in genome browser Nott_2019 Oligodendrocyte ATAC-seq accessible chromatin region (bed3-lifted) [Life stage: Child] [Accessible chromatin]
Show metadata Identifier NGBEPELO5LCQ5SXA Data Source Nott_2019 Download track Download Number of intervals 38,476 bp covered 21,024,569 Output type accessible chromatin region Genome build hg38 cell type Oligodendrocyte Biosample type Tissue Biosamples term id CL:0000128 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ATAC-seq File format bed bed3-lifted File size 655,864 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz Processed file md5 6b2c4ffe6b3231aad4c075865a59f6ed wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/ATAC/Olig2_optimal_peak_IDR_ENCODE.ATAC.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/ATAC/Olig2_optimal_peak_IDR_ENCODE.ATAC.sorted.bigBed.gz Raw file md5 67c32af1e8a65fea0af9a2c4214f9d9a Data Category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region Track Description Original_cell_type=Olig2_optimal_peak_IDR_ENCODE.ATAC;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology;acknowledgements=FILER2/Annotationt system category Nervous life stage Child trackName Nott_2019 Oligodendrocyte ATAC-seq accessible chromatin region (bed3-lifted) [Life stage: Child] [Accessible chromatin]
NGBEPELPRTGXPUEM Download track View in genome browser Nott_2019 Astrocyte Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBEPELPRTGXPUEM Data Source Nott_2019 Download track Download Number of intervals 70,902 bp covered 92,528,824 Output type peaks Genome build hg38 cell type Astrocyte Biosample type Tissue Biosamples term id CL:0000127 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Histone ChIP-seq File format bed bed3-lifted File size 1,174,896 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz Processed file md5 16d17f95ad4755e6b660faf3576c2946 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.H3K27_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/LHX2_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K27/LHX2_optimal_peak_IDR_ENCODE.H3K27.sorted.bigBed.gz Raw file md5 0176dc7dea4e18131e9b56a9c475050b Data Category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K27ac peaks Track Description Original_cell_type=LHX2_optimal_peak_IDR_ENCODE.H3K27;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=12yo, 14yo, 4yo;sexes=M;ethnicities=Caucasian, HIs, His;brain_regions=Frontal Cortex, Temporal Cortex;pathologies_dx=Cystic encephalomalacia , Focal cortical dysplasia type Ic, N system category Nervous life stage Child trackName Nott_2019 Astrocyte Histone ChIP-seq H3K27ac peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
NGBEPELPW2WHHWWJ Download track View in genome browser Nott_2019 Neuron PLAC-seq H3K4me3-histone-mark chromatin interactions (bed4+19 interact) [Life stage: Child] [Chromatin interactions]
Show metadata Identifier NGBEPELPW2WHHWWJ Data Source Nott_2019 Download track Download Number of intervals 186,454 bp covered 932,689,358 Output type chromatin interactions Genome build hg38 cell type Neuron Biosample type Tissue Biosamples term id CL:0000540 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K4me3 Assay PLAC-seq File format bed bed4+19 interact File size 4,057,893 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/05/2025 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_NeuN_PLAC_seq_lifted.bed.gz Processed file md5 9cdbbf6226ae92fa18c32d6d04b1c19a wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_NeuN_PLAC_seq_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38/formatted_output_NeuN_PLAC_seq_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/PLAC-seq/bed4plus19_interact/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/PLAC/NeuN.5k.2.peaks_interactions_ucsc_genome_browser.inter.bed -P FILER2/Annotationtracks/Downloads/Nott_2019/PLAC/NeuN.5k.2.peaks_interactions_ucsc_genome_browser.inter.bed Raw file md5 44c933050983d29d3835459ceb4de1b7 Data Category Chromatin interactions Genomic feature type PLAC-seq H3K4me3 chromatin interactions Track Description Original_cell_type=neurons;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;value_description=value=score/1000;ages=14yo, 4yo, 6yo, 8yo;sexes=F, M;ethnicities=Caucasian, His, Pacific Islander;brain_regions=Frontal Cortex, Temporal Cortex;pathologies_dx=Focal cortical dysplasia type IIa system category Nervous life stage Child trackName Nott_2019 Neuron PLAC-seq H3K4me3-histone-mark chromatin interactions (bed4+19 interact) [Life stage: Child] [Chromatin interactions]
NGBEPELQJ2SLIT4P Download track View in genome browser Nott_2019 Oligodendrocyte Histone ChIP-seq H3K4me3 peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBEPELQJ2SLIT4P Data Source Nott_2019 Download track Download Number of intervals 28,955 bp covered 36,629,556 Output type peaks Genome build hg38 cell type Oligodendrocyte Biosample type Tissue Biosamples term id CL:0000128 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K4me3 Assay Histone ChIP-seq File format bed bed3-lifted File size 502,272 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz Processed file md5 5ae5731610e1added5813376bec1b094 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_Olig2_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/H3K4me3/Olig2_optimal_peak_IDR_ENCODE.H3K4me3.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K4me3/Olig2_optimal_peak_IDR_ENCODE.H3K4me3.sorted.bigBed.gz Raw file md5 b8aef318b4f04272a76456c27c0a8a0c Data Category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K4me3 peaks Track Description Original_cell_type=Olig2_optimal_peak_IDR_ENCODE.H3K4me3;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology;acknowledgements=FILER2/Annotati system category Nervous life stage Child trackName Nott_2019 Oligodendrocyte Histone ChIP-seq H3K4me3 peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
NGBEPELTEX7FTWNU Download track View in genome browser Nott_2019 PU.1+ Microglia Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Adult, Child] [Enhancer]
Show metadata Identifier NGBEPELTEX7FTWNU Data Source Nott_2019 Download track Download Number of intervals 627 bp covered 36,383,399 Output type super-enhancer peaks Genome build hg38 cell type PU.1+ Microglia Biosample type Tissue Biosamples term id CL:0000129 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Super-enhancer File format bed bed6-lifted File size 16,103 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_PU1_superEnhancer_L1_lifted.bed.gz Processed file md5 b092169eb4fb0766f1ebd6df526a7726 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_PU1_superEnhancer_L1_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38/formatted_output_PU1_superEnhancer_L1_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Super-enhancer/bed6-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/PU1_superEnhancer_L1.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/Super_enhancers/PU1_superEnhancer_L1.gz Raw file md5 b7f0d422ddeea5e5a8b5df151d9f4e21 Data Category Enhancer Genomic feature type H3K27ac super-enhancer peaks Track Description Original_cell_type=microglia;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 4yo, 18yo;sexes=M;ethnicities=His, Caucasian;brain_regions=Parietal Cortex, Temporal Cortex;pathologies_dx system category Nervous life stage Adult, Child trackName Nott_2019 PU.1+ Microglia Super-enhancer H3K27ac-histone-mark super-enhancer peaks (bed6-lifted) [Life stage: Adult, Child] [Enhancer]
NGBEPELUAKDKDCNE Download track View in genome browser Nott_2019 Astrocyte Histone ChIP-seq H3K4me3 peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBEPELUAKDKDCNE Data Source Nott_2019 Download track Download Number of intervals 19,254 bp covered 24,973,448 Output type peaks Genome build hg38 cell type Astrocyte Biosample type Tissue Biosamples term id CL:0000127 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K4me3 Assay Histone ChIP-seq File format bed bed3-lifted File size 337,937 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz Processed file md5 72fcc04c69b24db1f1ccc0e5133334d5 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_LHX2_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/H3K4me3/LHX2_optimal_peak_IDR_ENCODE.H3K4me3.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K4me3/LHX2_optimal_peak_IDR_ENCODE.H3K4me3.sorted.bigBed.gz Raw file md5 79032d90285ecdf5b80ae979b50f42cb Data Category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K4me3 peaks Track Description Original_cell_type=LHX2_optimal_peak_IDR_ENCODE.H3K4me3;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology;acknowledgements=FILER2/Annotatio system category Nervous life stage Child trackName Nott_2019 Astrocyte Histone ChIP-seq H3K4me3 peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
NGBEPELVGBAZPWVJ Download track View in genome browser Nott_2019 PU.1+ Microglia ATAC-seq accessible chromatin region (bed3-lifted) [Life stage: Child] [Accessible chromatin]
Show metadata Identifier NGBEPELVGBAZPWVJ Data Source Nott_2019 Download track Download Number of intervals 50,199 bp covered 26,339,987 Output type accessible chromatin region Genome build hg38 cell type PU.1+ Microglia Biosample type Tissue Biosamples term id CL:0000129 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody Not applicable Assay ATAC-seq File format bed bed3-lifted File size 841,467 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz Processed file md5 9fc7767d501a938f90c44caa25a2d68f wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38/formatted_output_PU1_optimal_peak_IDR_ENCODE.ATAC_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/ATAC-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/ATAC/PU1_optimal_peak_IDR_ENCODE.ATAC.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/ATAC/PU1_optimal_peak_IDR_ENCODE.ATAC.sorted.bigBed.gz Raw file md5 3a37870a7e3568ebd976057707371bd2 Data Category Accessible chromatin Genomic feature type ATAC-seq accessible chromatin region Track Description Original_cell_type=PU1_optimal_peak_IDR_ENCODE.ATAC;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology;acknowledgements=FILER2/Annotationtra system category Nervous life stage Child trackName Nott_2019 PU.1+ Microglia ATAC-seq accessible chromatin region (bed3-lifted) [Life stage: Child] [Accessible chromatin]
NGBEPELWEAN5LXGD Download track View in genome browser Nott_2019 Neuron Histone ChIP-seq H3K4me3 peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBEPELWEAN5LXGD Data Source Nott_2019 Download track Download Number of intervals 22,831 bp covered 40,610,754 Output type peaks Genome build hg38 cell type Neuron Biosample type Tissue Biosamples term id CL:0000540 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K4me3 Assay Histone ChIP-seq File format bed bed3-lifted File size 401,152 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz Processed file md5 7d490b946f0865fa4bbefb8232c4fd42 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38/formatted_output_NeuN_optimal_peak_IDR_ENCODE.H3K4me3_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Histone_ChIP-seq/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/H3K4me3/NeuN_optimal_peak_IDR_ENCODE.H3K4me3.sorted.bigBed.gz -P FILER2/Annotationtracks/Downloads/Nott_2019/H3K4me3/NeuN_optimal_peak_IDR_ENCODE.H3K4me3.sorted.bigBed.gz Raw file md5 858fe9f67a9f3f194c2083785f0434fa Data Category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H3K4me3 peaks Track Description Original_cell_type=NeuN_optimal_peak_IDR_ENCODE.H3K4me3;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;ages=14yo, 4yo;sexes=M;ethnicities=Caucasian, His;brain_regions=Temporal Cortex;pathologies_dx=Focal cortical dysplasia type Ic, Negative pathology;acknowledgements=FILER2/Annotatio system category Nervous life stage Child trackName Nott_2019 Neuron Histone ChIP-seq H3K4me3 peaks (bed3-lifted) [Life stage: Child] [Histone ChIP-seq peaks]
NGBEPELXRUBJ5PEB Download track View in genome browser Nott_2019 Astrocyte Enhancer H3K27ac-histone-mark enhancer peaks (bed3-lifted) [Life stage: Child] [Enhancer]
Show metadata Identifier NGBEPELXRUBJ5PEB Data Source Nott_2019 Download track Download Number of intervals 63,793 bp covered 68,540,614 Output type enhancer peaks Genome build hg38 cell type Astrocyte Biosample type Tissue Biosamples term id CL:0000127 Tissue category Brain ENCODE Experiment id Not applicable Biological replicate(s) Not reported Technical replicate Not applicable Antibody H3K27ac Assay Enhancer File format bed bed3-lifted File size 1,048,902 Downloaded date 10/02/2020 Release date 02/04/2020 Date added to FILER 12/03/2024 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_LHX2_enhancers_lifted.bed.gz Processed file md5 eecea1fad502c7be39819a055c0937af wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_LHX2_enhancers_lifted.bed.gz -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38 tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38/formatted_output_LHX2_enhancers_lifted.bed.gz.tbi -P FILER2/Annotationtracks/hg38_lifted/Nott_2019/Enhancer/bed3-lifted/hg38 Link out URL http://homer.ucsd.edu/iholtman/Nuclei_project/interaction/MAPS/ Raw File URL Not applicable Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/Nott_2019/enhancers/LHX2_enhancers.sorted.bigBed -P FILER2/Annotationtracks/Downloads/Nott_2019/enhancers/LHX2_enhancers.sorted.bigBed Raw file md5 33f70e542485065ce46412039fef9f69 Data Category Enhancer Genomic feature type H3K27ac enhancer peaks Track Description Original_cell_type=astrocyte;doi=https://doi.org/10.1126/science.aay0793;pubmed_id=31727856;notes=Active enhancers were identified by H3K27ac peaks that were outside of H3K4me3 peaks;ages=14yo, 12yo, 4yo;sexes=M;ethnicities=HIs, His, Caucasian;brain_regions=Temporal Cortex, Frontal Cortex;pathologie system category Nervous life stage Child trackName Nott_2019 Astrocyte Enhancer H3K27ac-histone-mark enhancer peaks (bed3-lifted) [Life stage: Child] [Enhancer]
NGBLP22HOI5MVP Download track View in genome browser Blueprint Dendritic cell ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP22HOI5MVP Data Source Blueprint Download track Download Number of intervals 85,254 bp covered 46,570,949 Output type peaks Genome build hg38 cell type Dendritic cell Biosample type Primary cell Biosamples term id CL:0000451 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27ac Assay ChIP-seq File format bed bed6 File size 1,115,354 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58488.Blueprint.ERS1044647.H3K27ac.peak_calls.bed.gz Processed file md5 7cb9299b13f028cc93d44bffaa1cb682 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58488.Blueprint.ERS1044647.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58488.Blueprint.ERS1044647.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/58488.Blueprint.ERS1044647.H3K27ac.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/58488.Blueprint.ERS1044647.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 a9bc8cd13ed826ec2d3851fefd41aa8e Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks Track Description Original_cell_type=Mature conventional dendritic cell;ID=ERS1044647;disease=Healthy;donor_id=B270;donor_age=45-50;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000841;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/ system category Cardiovascular life stage Adult trackName Blueprint Dendritic cell ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP22U5BMHOA Download track View in genome browser Blueprint Peripheral mononucleated cell ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP22U5BMHOA Data Source Blueprint Download track Download Number of intervals 123,478 bp covered 65,239,996 Output type peaks Genome build hg38 cell type Peripheral mononucleated cell Biosample type Primary cell Biosamples term id CL:2000001 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27ac Assay ChIP-seq File format bed bed6 File size 1,547,826 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62573.Blueprint.ERS699840.H3K27ac.peak_calls.bed.gz Processed file md5 b50e559d5c211877e529c6552f1d98e9 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62573.Blueprint.ERS699840.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62573.Blueprint.ERS699840.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/62573.Blueprint.ERS699840.H3K27ac.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/62573.Blueprint.ERS699840.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 a5f1f835713b4b0fb3b5b9adba20a663 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks Track Description Original_cell_type=Peripheral blood mononuclear cell;ID=ERS699840;disease=Acute Myeloid Leukemia;donor_id=UMCG00025;donor_age=20-25;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_2000001;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf system category Cardiovascular life stage Adult trackName Blueprint Peripheral mononucleated cell ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP232QO44J6 Download track View in genome browser Blueprint CD14+CD16- monocyte ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP232QO44J6 Data Source Blueprint Download track Download Number of intervals 38,217 bp covered 31,723,352 Output type peaks Genome build hg38 cell type CD14+CD16- monocyte Biosample type Primary cell Biosamples term id CL:0002057 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K9me3 Assay ChIP-seq File format bed bed6 File size 486,117 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59930.Blueprint.ERS206567.H3K9me3.peak_calls.bed.gz Processed file md5 b410df80ab41636fe33e7538988c63de wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59930.Blueprint.ERS206567.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59930.Blueprint.ERS206567.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/59930.Blueprint.ERS206567.H3K9me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/59930.Blueprint.ERS206567.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 989bedb8e423afec6d8c5d881bdcda76 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks Track Description Original_cell_type=CD14-positive, CD16-negative classical monocyte;ID=ERS206567;disease=Healthy;donor_id=C005PS;donor_age=0-5;donor_sex=Female;sample_ontology=http://purl.obolibrary.org/obo/CL_0002057;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lis system category Cardiovascular life stage Child trackName Blueprint CD14+CD16- monocyte ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Child] [Histone ChIP-seq peaks]
NGBLP236EJGLEG Download track View in genome browser Blueprint CD8+ alpha-beta T cell ChIP-seq H3K4me1-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP236EJGLEG Data Source Blueprint Download track Download Number of intervals 58,055 bp covered 155,108,747 Output type peaks Genome build hg38 cell type CD8+ alpha-beta T cell Biosample type Primary cell Biosamples term id CL:0000625 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K4me1 Assay ChIP-seq File format bed bed6 File size 726,602 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/60925.Blueprint.ERS257250.H3K4me1.peak_calls.bed.gz Processed file md5 ea04a4656c31da1952fe1cb250c6296d wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/60925.Blueprint.ERS257250.H3K4me1.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/60925.Blueprint.ERS257250.H3K4me1.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/60925.Blueprint.ERS257250.H3K4me1.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/60925.Blueprint.ERS257250.H3K4me1.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 011efb81d16679c0885945de5cec232c Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks Track Description Original_cell_type=Effector memory CD8-positive, alpha-beta T cell, terminally differentiated;ID=ERS257250;disease=Healthy;donor_id=S004JD;donor_age=60-65;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0001062;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_ack system category Cardiovascular life stage Adult trackName Blueprint CD8+ alpha-beta T cell ChIP-seq H3K4me1-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP23ICFIDUF Download track View in genome browser Blueprint Lymph node ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP23ICFIDUF Data Source Blueprint Download track Download Number of intervals 42,551 bp covered 37,433,043 Output type peaks Genome build hg38 cell type Lymph node Biosample type Primary tissue Biosamples term id UBERON:0000029 Tissue category Immune Organ ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27ac Assay ChIP-seq File format bed bed6 File size 570,977 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57480.Blueprint.ERS886070.H3K27ac.peak_calls.bed.gz Processed file md5 eee4a8ab2beab7e986cb723bcac70e43 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57480.Blueprint.ERS886070.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57480.Blueprint.ERS886070.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/57480.Blueprint.ERS886070.H3K27ac.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/57480.Blueprint.ERS886070.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 d2e034b4b9f4efec54d16b626d5d0c9c Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks Track Description Original_cell_type=Lymph node;ID=ERS886070;disease=Lymphoma_Follicular;donor_id=FL Grad 1_2_1;donor_age=70-75;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/UBERON_0000029;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/ system category Lymphatic life stage Adult trackName Blueprint Lymph node ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP254FDWDS5 Download track View in genome browser Blueprint Dendritic cell ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP254FDWDS5 Data Source Blueprint Download track Download Number of intervals 5,744 bp covered 6,644,143 Output type peaks Genome build hg38 cell type Dendritic cell Biosample type Primary cell Biosamples term id CL:0000451 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K9me3 Assay ChIP-seq File format bed bed6 File size 78,063 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58646.Blueprint.ERS1044677.H3K9me3.peak_calls.bed.gz Processed file md5 52d32a6ffe1d5243042f5fbd0594ff40 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58646.Blueprint.ERS1044677.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58646.Blueprint.ERS1044677.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/58646.Blueprint.ERS1044677.H3K9me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/58646.Blueprint.ERS1044677.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 0d0aeae56e2158d9ed6c505ab5ae361a Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks Track Description Original_cell_type=Mature conventional dendritic cell;ID=ERS1044677;disease=Healthy;donor_id=B272;donor_age=35-40;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000841;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/ system category Cardiovascular life stage Adult trackName Blueprint Dendritic cell ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP25JEJ3JN4 Download track View in genome browser Blueprint Neutrophil ChIP-seq H3K4me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP25JEJ3JN4 Data Source Blueprint Download track Download Number of intervals 30,373 bp covered 36,018,203 Output type peaks Genome build hg38 cell type Neutrophil Biosample type Primary cell Biosamples term id CL:0000775 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K4me3 Assay ChIP-seq File format bed bed6 File size 373,418 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62354.Blueprint.ERS462587.H3K4me3.peak_calls.bed.gz Processed file md5 7f3e4eb034f6f6b3474aae95d8b09634 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62354.Blueprint.ERS462587.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62354.Blueprint.ERS462587.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/62354.Blueprint.ERS462587.H3K4me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/62354.Blueprint.ERS462587.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 b1cca84c9a1bca2023db4a0d51b7a9eb Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks Track Description Original_cell_type=Mature neutrophil;ID=ERS462587;disease=Healthy;donor_id=PB130513;donor_age=30-35;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000096;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GADB/FILER2/ac system category Cardiovascular life stage Adult trackName Blueprint Neutrophil ChIP-seq H3K4me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP26FRQIHHG Download track View in genome browser Blueprint Neutrophil ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP26FRQIHHG Data Source Blueprint Download track Download Number of intervals 84,165 bp covered 118,042,589 Output type peaks Genome build hg38 cell type Neutrophil Biosample type Primary cell Biosamples term id CL:0000775 Tissue category Bone ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K9me3 Assay ChIP-seq File format bed bed6 File size 1,045,750 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61870.Blueprint.ERS462585.H3K9me3.peak_calls.bed.gz Processed file md5 7fac55ef092fc1f31261a2b2d3132143 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61870.Blueprint.ERS462585.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61870.Blueprint.ERS462585.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/61870.Blueprint.ERS462585.H3K9me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/61870.Blueprint.ERS462585.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 9bff0223acbb615589d6d9ffc38cbbb6 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks Track Description Original_cell_type=Segmented neutrophil of bone marrow;ID=ERS462585;disease=Healthy;donor_id=BM220513;donor_age=65-70;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0011114;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab. system category Skeletal life stage Adult trackName Blueprint Neutrophil ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP275JJNHVW Download track View in genome browser Blueprint Lymph node ChIP-seq H3K4me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP275JJNHVW Data Source Blueprint Download track Download Number of intervals 25,436 bp covered 30,998,952 Output type peaks Genome build hg38 cell type Lymph node Biosample type Primary tissue Biosamples term id UBERON:0000029 Tissue category Immune Organ ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K4me3 Assay ChIP-seq File format bed bed6 File size 363,709 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57519.Blueprint.ERS886071.H3K4me3.peak_calls.bed.gz Processed file md5 3a3d202e549cfba3451e116532347c15 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57519.Blueprint.ERS886071.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57519.Blueprint.ERS886071.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/57519.Blueprint.ERS886071.H3K4me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/57519.Blueprint.ERS886071.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 19a8dc67f9844442eb251f6d6fc69cbb Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks Track Description Original_cell_type=Lymph node;ID=ERS886071;disease=Lymphoma_Follicular;donor_id=FL Grad 1_2_2;donor_age=40-45;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/UBERON_0000029;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/ system category Lymphatic life stage Adult trackName Blueprint Lymph node ChIP-seq H3K4me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP27NIRXMUY Download track View in genome browser Blueprint Myeloid cell WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
Show metadata Identifier NGBLP27NIRXMUY Data Source Blueprint Download track Download Number of intervals 537,598 bp covered 2,077,167,668 Output type peaks Genome build hg38 cell type Myeloid cell Biosample type Primary cell Biosamples term id CL:0000763 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody Not applicable Assay WGB-Seq File format bed bed4 File size 6,321,733 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/62425.Blueprint.ERS699848.WGB-Seq.peak_calls.bed.gz Processed file md5 38d4891a9e96b2cc5a40401cd9e641d2 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/62425.Blueprint.ERS699848.WGB-Seq.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/62425.Blueprint.ERS699848.WGB-Seq.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/62425.Blueprint.ERS699848.WGB-Seq.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/62425.Blueprint.ERS699848.WGB-Seq.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 fe85477ed6364a3d944c8e1c47c0c420 Data Category Methylation Genomic feature type WGB-Seq peaks Track Description Original_cell_type=Myeloid cell;ID=ERS699848;disease=Acute Myeloid Leukemia;donor_id=UMCG00003;donor_age=20-25;donor_sex=Female;sample_ontology=http://purl.obolibrary.org/obo/CL_2000001;schema=BED4;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/G system category Cardiovascular life stage Adult trackName Blueprint Myeloid cell WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
NGBLP27RNLAK5B Download track View in genome browser Blueprint Myeloid cell ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP27RNLAK5B Data Source Blueprint Download track Download Number of intervals 146,475 bp covered 119,391,385 Output type peaks Genome build hg38 cell type Myeloid cell Biosample type Primary cell Biosamples term id CL:0000763 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27ac Assay ChIP-seq File format bed bed6 File size 1,872,243 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62097.Blueprint.ERS655114.H3K27ac.peak_calls.bed.gz Processed file md5 1c4d9edafa05250d270f82c95dde8871 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62097.Blueprint.ERS655114.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62097.Blueprint.ERS655114.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/62097.Blueprint.ERS655114.H3K27ac.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/62097.Blueprint.ERS655114.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 e9c588d8aad3a19c03d8ba6e0eaffc43 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks Track Description Original_cell_type=Myeloid cell;ID=ERS655114;disease=Acute Myeloid Leukemia;donor_id=pz 298;donor_age=75-80;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000763;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GADB/F system category Cardiovascular life stage Adult trackName Blueprint Myeloid cell ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2AWLV25GB Download track View in genome browser Blueprint Monocyte ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2AWLV25GB Data Source Blueprint Download track Download Number of intervals 78,531 bp covered 45,787,331 Output type peaks Genome build hg38 cell type Monocyte Biosample type Primary cell Biosamples term id CL:0000576 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27ac Assay ChIP-seq File format bed bed6 File size 1,033,137 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59143.Blueprint.ERS1044029.H3K27ac.peak_calls.bed.gz Processed file md5 02fa449b2a92c2fd91bcb83e2d29d9ce wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59143.Blueprint.ERS1044029.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59143.Blueprint.ERS1044029.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/59143.Blueprint.ERS1044029.H3K27ac.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/59143.Blueprint.ERS1044029.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 e1f35f5e57645217365bb02be21132e1 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks Track Description Original_cell_type=Monocyte;ID=ERS1044029;disease=Healthy;donor_id=SANQUIN_mono_61;donor_age=50-55;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000576;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GADB/FILER2/ack system category Cardiovascular life stage Adult trackName Blueprint Monocyte ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2BUVYEX5E Download track View in genome browser Blueprint Blood ChIP-seq H3K9me3-histone-mark peaks (bed6) [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2BUVYEX5E Data Source Blueprint Download track Download Number of intervals 23,032 bp covered 36,298,743 Output type peaks Genome build hg38 cell type Blood Biosample type Primary tissue Biosamples term id UBERON:0000178 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K9me3 Assay ChIP-seq File format bed bed6 File size 313,351 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57594.Blueprint.ERS886076.H3K9me3.peak_calls.bed.gz Processed file md5 7211fa193ec44faa4e42dad68e314337 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57594.Blueprint.ERS886076.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/57594.Blueprint.ERS886076.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/57594.Blueprint.ERS886076.H3K9me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/57594.Blueprint.ERS886076.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 c9887e61c1e43c1a5284c07dd9ab048f Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks Track Description Original_cell_type=Venous blood;ID=ERS886076;disease=T-cell Prolymphocytic Leukemia;donor_id=WR27;donor_age=NR;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/UBERON_0013756;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org system category Cardiovascular life stage Unknown trackName Blueprint Blood ChIP-seq H3K9me3-histone-mark peaks (bed6) [Histone ChIP-seq peaks]
NGBLP2BZXVPWMJ Download track View in genome browser Blueprint Neutrophil ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2BZXVPWMJ Data Source Blueprint Download track Download Number of intervals 105,599 bp covered 162,483,600 Output type peaks Genome build hg38 cell type Neutrophil Biosample type Primary cell Biosamples term id CL:0000775 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K9me3 Assay ChIP-seq File format bed bed6 File size 1,310,094 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61868.Blueprint.ERS462582.H3K9me3.peak_calls.bed.gz Processed file md5 1bd02d7b37f5e213b734cabd197d843b wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61868.Blueprint.ERS462582.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61868.Blueprint.ERS462582.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/61868.Blueprint.ERS462582.H3K9me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/61868.Blueprint.ERS462582.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 4c550764d1bcf3a0f14891330bf93c46 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks Track Description Original_cell_type=Band form neutrophil;ID=ERS462582;disease=Healthy;donor_id=BM220513;donor_age=65-70;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000560;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GADB/FILER2 system category Cardiovascular life stage Adult trackName Blueprint Neutrophil ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2CCJ2QX2L Download track View in genome browser Blueprint Blood ChIP-seq H3K27me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2CCJ2QX2L Data Source Blueprint Download track Download Number of intervals 27,283 bp covered 19,879,895 Output type peaks Genome build hg38 cell type Blood Biosample type Primary tissue Biosamples term id UBERON:0000178 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27me3 Assay ChIP-seq File format bed bed6 File size 337,509 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61576.Blueprint.ERS568737.H3K27me3.peak_calls.bed.gz Processed file md5 290f69ce7e84c3a8d389f1985d534333 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61576.Blueprint.ERS568737.H3K27me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61576.Blueprint.ERS568737.H3K27me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/61576.Blueprint.ERS568737.H3K27me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/61576.Blueprint.ERS568737.H3K27me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 c05d9fbed0c855f58e4d5760bebe0351 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks Track Description Original_cell_type=Venous blood;ID=ERS568737;disease=Chronic Lymphocytic Leukemia;donor_id=1525CLL;donor_age=45-50;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/UBERON_0013756;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab system category Cardiovascular life stage Adult trackName Blueprint Blood ChIP-seq H3K27me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2CUAI32ZR Download track View in genome browser Blueprint Monocyte ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2CUAI32ZR Data Source Blueprint Download track Download Number of intervals 98,000 bp covered 91,275,819 Output type peaks Genome build hg38 cell type Monocyte Biosample type Primary cell Biosamples term id CL:0000576 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27ac Assay ChIP-seq File format bed bed6 File size 1,318,524 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58851.Blueprint.ERS1044027.H3K27ac.peak_calls.bed.gz Processed file md5 f305085270ca55bd9d39ed78814f658f wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58851.Blueprint.ERS1044027.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58851.Blueprint.ERS1044027.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/58851.Blueprint.ERS1044027.H3K27ac.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/58851.Blueprint.ERS1044027.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 9f127a3b656241a67703deda40fe1490 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks Track Description Original_cell_type=Monocyte;ID=ERS1044027;disease=Healthy;donor_id=SANQUIN_mono_61;donor_age=50-55;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000576;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GADB/FILER2/ack system category Cardiovascular life stage Adult trackName Blueprint Monocyte ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2CYKXZ55P Download track View in genome browser Blueprint Natural killer cell ChIP-seq H3K27me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2CYKXZ55P Data Source Blueprint Download track Download Number of intervals 111,340 bp covered 114,361,723 Output type peaks Genome build hg38 cell type Natural killer cell Biosample type Primary cell Biosamples term id CL:0000623 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27me3 Assay ChIP-seq File format bed bed6 File size 1,419,776 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62666.Blueprint.ERS643202.H3K27me3.peak_calls.bed.gz Processed file md5 6b84cf8656202125363dd1abf315e5d8 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62666.Blueprint.ERS643202.H3K27me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62666.Blueprint.ERS643202.H3K27me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/62666.Blueprint.ERS643202.H3K27me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/62666.Blueprint.ERS643202.H3K27me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 225e28c7a450e6baa46524d29ffcbc5c Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks Track Description Original_cell_type=Cytotoxic CD56-dim natural killer cell;ID=ERS643202;disease=Healthy;donor_id=S00XJ8;donor_age=55-60;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000939;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab system category Cardiovascular life stage Adult trackName Blueprint Natural killer cell ChIP-seq H3K27me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2D6EQ3J5Q Download track View in genome browser Blueprint Monocyte ChIP-seq H3K4me1-histone-mark peaks (bed6) [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2D6EQ3J5Q Data Source Blueprint Download track Download Number of intervals 104,717 bp covered 234,260,067 Output type peaks Genome build hg38 cell type Monocyte Biosample type Primary cell Biosamples term id CL:0000576 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K4me1 Assay ChIP-seq File format bed bed6 File size 1,448,683 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58518.Blueprint.ERS1044014.H3K4me1.peak_calls.bed.gz Processed file md5 5c14308a96ee20326061db496c1d897c wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58518.Blueprint.ERS1044014.H3K4me1.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58518.Blueprint.ERS1044014.H3K4me1.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/58518.Blueprint.ERS1044014.H3K4me1.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/58518.Blueprint.ERS1044014.H3K4me1.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 643eed0913812fd70ae4c32beba9fae8 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks Track Description Original_cell_type=Monocyte;ID=ERS1044014;disease=Healthy;donor_id=SANQUIN_mono_36;donor_age=NR;donor_sex=Female;sample_ontology=http://purl.obolibrary.org/obo/CL_0000576;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GADB/FILER2/ackn system category Cardiovascular life stage Unknown trackName Blueprint Monocyte ChIP-seq H3K4me1-histone-mark peaks (bed6) [Histone ChIP-seq peaks]
NGBLP2ECERAEJX Download track View in genome browser Blueprint Myeloid cell ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2ECERAEJX Data Source Blueprint Download track Download Number of intervals 150,633 bp covered 75,413,821 Output type peaks Genome build hg38 cell type Myeloid cell Biosample type Primary cell Biosamples term id CL:0000763 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27ac Assay ChIP-seq File format bed bed6 File size 1,949,508 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59287.Blueprint.ERS1077460.H3K27ac.peak_calls.bed.gz Processed file md5 572ab6b199db968f5d3bd4b1f676e191 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59287.Blueprint.ERS1077460.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/59287.Blueprint.ERS1077460.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/59287.Blueprint.ERS1077460.H3K27ac.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/59287.Blueprint.ERS1077460.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 aa8fde7f6949174e4ffbdb8b9889dcbb Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks Track Description Original_cell_type=Myeloid cell;ID=ERS1077460;disease=Acute Myeloid Leukemia;donor_id=S01BTV;donor_age=55-60;donor_sex=Female;sample_ontology=http://purl.obolibrary.org/obo/CL_0000763;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GAD system category Cardiovascular life stage Adult trackName Blueprint Myeloid cell ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2EKJYQ47P Download track View in genome browser Blueprint Myeloid cell ChIP-seq H3K4me1-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2EKJYQ47P Data Source Blueprint Download track Download Number of intervals 19,191 bp covered 16,036,943 Output type peaks Genome build hg38 cell type Myeloid cell Biosample type Primary cell Biosamples term id CL:0000763 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K4me1 Assay ChIP-seq File format bed bed6 File size 237,231 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/60079.Blueprint.ERS255948.H3K4me1.peak_calls.bed.gz Processed file md5 cea527dc97e5d8d9cd20a4921fb2428e wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/60079.Blueprint.ERS255948.H3K4me1.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/60079.Blueprint.ERS255948.H3K4me1.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/60079.Blueprint.ERS255948.H3K4me1.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/60079.Blueprint.ERS255948.H3K4me1.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 0480b7a995883dd6a8e2b803eb68dafc Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks Track Description Original_cell_type=Myeloid cell;ID=ERS255948;disease=Acute Promyelocytic Leukemia;donor_id=pz 284;donor_age=40-45;donor_sex=Female;sample_ontology=http://purl.obolibrary.org/obo/CL_0000763;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.or system category Cardiovascular life stage Adult trackName Blueprint Myeloid cell ChIP-seq H3K4me1-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2F3DL2Y6E Download track View in genome browser Blueprint Precursor B cell ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2F3DL2Y6E Data Source Blueprint Download track Download Number of intervals 43,399 bp covered 54,737,172 Output type peaks Genome build hg38 cell type Precursor B cell Biosample type Primary cell Biosamples term id CL:0000817 Tissue category Bone ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K9me3 Assay ChIP-seq File format bed bed6 File size 578,532 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58895.Blueprint.ERS1044115.H3K9me3.peak_calls.bed.gz Processed file md5 5cbdc0e564eabd449e531afd1c825063 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58895.Blueprint.ERS1044115.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58895.Blueprint.ERS1044115.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/58895.Blueprint.ERS1044115.H3K9me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/58895.Blueprint.ERS1044115.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 d826939f3cd30a3c9067a0cba0c3bbdb Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks Track Description Original_cell_type=Precursor B cell;ID=ERS1044115;disease=Acute Lymphocytic Leukemia;donor_id=S017B9;donor_age=0-18;donor_sex=Unknown;sample_ontology=http://purl.obolibrary.org/obo/CL_0000817;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab system category Skeletal life stage Child trackName Blueprint Precursor B cell ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Child] [Histone ChIP-seq peaks]
NGBLP2FSJHZBFL Download track View in genome browser Blueprint Myeloid cell ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2FSJHZBFL Data Source Blueprint Download track Download Number of intervals 54 bp covered 44,344 Output type peaks Genome build hg38 cell type Myeloid cell Biosample type Primary cell Biosamples term id CL:0000763 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K9me3 Assay ChIP-seq File format bed bed6 File size 840 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62683.Blueprint.ERS255949.H3K9me3.peak_calls.bed.gz Processed file md5 658d68f99b407e596078a62e20a6c3a1 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62683.Blueprint.ERS255949.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/62683.Blueprint.ERS255949.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/62683.Blueprint.ERS255949.H3K9me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/62683.Blueprint.ERS255949.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 aed9c6eec379f00b8e0955206a15e44f Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks Track Description Original_cell_type=Myeloid cell;ID=ERS255949;disease=Acute Myeloid Leukemia;donor_id=UMCG00018;donor_age=55-60;donor_sex=Female;sample_ontology=http://purl.obolibrary.org/obo/CL_0000763;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/G system category Cardiovascular life stage Adult trackName Blueprint Myeloid cell ChIP-seq H3K9me3-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2FZVEIVBG Download track View in genome browser Blueprint CD8+ alpha-beta T cell WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
Show metadata Identifier NGBLP2FZVEIVBG Data Source Blueprint Download track Download Number of intervals 58,857 bp covered 30,129,184 Output type peaks Genome build hg38 cell type CD8+ alpha-beta T cell Biosample type Primary cell Biosamples term id CL:0000625 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody Not applicable Assay WGB-Seq File format bed bed4 File size 684,730 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/60105.Blueprint.ERS317234.WGB-Seq.peak_calls.bed.gz Processed file md5 9d26437a75cb56d1dce0406bb86ff40f wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/60105.Blueprint.ERS317234.WGB-Seq.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/60105.Blueprint.ERS317234.WGB-Seq.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/60105.Blueprint.ERS317234.WGB-Seq.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/60105.Blueprint.ERS317234.WGB-Seq.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 c2e7788d91579783780cf6486d0254bf Data Category Methylation Genomic feature type WGB-Seq peaks Track Description Original_cell_type=Effector memory CD8-positive, alpha-beta T cell;ID=ERS317234;disease=Healthy;donor_id=C00256;donor_age=40-45;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000913;schema=BED4;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lis system category Cardiovascular life stage Adult trackName Blueprint CD8+ alpha-beta T cell WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
NGBLP2G4OS2BL7 Download track View in genome browser Blueprint Neutrophilic metamyelocyte WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
Show metadata Identifier NGBLP2G4OS2BL7 Data Source Blueprint Download track Download Number of intervals 536,301 bp covered 2,043,426,668 Output type peaks Genome build hg38 cell type Neutrophilic metamyelocyte Biosample type Primary cell Biosamples term id CL:0000582 Tissue category Bone ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody Not applicable Assay WGB-Seq File format bed bed4 File size 6,315,657 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/62389.Blueprint.ERS661052.WGB-Seq.peak_calls.bed.gz Processed file md5 e95b675ab7ece9ceacce459aeb440147 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/62389.Blueprint.ERS661052.WGB-Seq.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/62389.Blueprint.ERS661052.WGB-Seq.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/62389.Blueprint.ERS661052.WGB-Seq.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/62389.Blueprint.ERS661052.WGB-Seq.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 599df02caabdaab94583372982f846f1 Data Category Methylation Genomic feature type WGB-Seq peaks Track Description Original_cell_type=Neutrophilic metamyelocyte;ID=ERS661052;disease=Healthy;donor_id=BM190913;donor_age=70-75;donor_sex=Female;sample_ontology=http://purl.obolibrary.org/obo/CL_0000582;schema=BED4;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GAD system category Skeletal life stage Adult trackName Blueprint Neutrophilic metamyelocyte WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
NGBLP2G6GW5YJN Download track View in genome browser Blueprint Neutrophilic myelocyte ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2G6GW5YJN Data Source Blueprint Download track Download Number of intervals 65,245 bp covered 44,138,103 Output type peaks Genome build hg38 cell type Neutrophilic myelocyte Biosample type Primary cell Biosamples term id CL:0000580 Tissue category Bone ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K27ac Assay ChIP-seq File format bed bed6 File size 849,211 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61854.Blueprint.ERS462584.H3K27ac.peak_calls.bed.gz Processed file md5 5625ed309a807503ce4975f8c5916649 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61854.Blueprint.ERS462584.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/61854.Blueprint.ERS462584.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/61854.Blueprint.ERS462584.H3K27ac.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/61854.Blueprint.ERS462584.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 5391ef4dad8ab78667f9dc9acf82f205 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks Track Description Original_cell_type=Neutrophilic myelocyte;ID=ERS462584;disease=Healthy;donor_id=BM220513;donor_age=65-70;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000580;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GADB/FILE system category Skeletal life stage Adult trackName Blueprint Neutrophilic myelocyte ChIP-seq H3K27ac-histone-mark peaks (bed6) [Life stage: Adult] [Histone ChIP-seq peaks]
NGBLP2GRUDCBBN Download track View in genome browser Blueprint Monocyte WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
Show metadata Identifier NGBLP2GRUDCBBN Data Source Blueprint Download track Download Number of intervals 139,957 bp covered 58,897,030 Output type peaks Genome build hg38 cell type Monocyte Biosample type Primary cell Biosamples term id CL:0000576 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody Not applicable Assay WGB-Seq File format bed bed4 File size 1,593,796 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/58340.Blueprint.ERS1158285.WGB-Seq.peak_calls.bed.gz Processed file md5 e41f18998c84abd6cdf7de1c1f9aa3a8 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/58340.Blueprint.ERS1158285.WGB-Seq.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/58340.Blueprint.ERS1158285.WGB-Seq.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/58340.Blueprint.ERS1158285.WGB-Seq.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/58340.Blueprint.ERS1158285.WGB-Seq.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 7b43423c87aff82f747418292e7e2caa Data Category Methylation Genomic feature type WGB-Seq peaks Track Description Original_cell_type=Monocyte;ID=ERS1158285;disease=Healthy;donor_id=SANQUIN_mono_39;donor_age=45-50;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/CL_0000576;schema=BED4;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwanglab.org/GADB/FILER2/ack system category Cardiovascular life stage Adult trackName Blueprint Monocyte WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
NGBLP2H3TXSD2B Download track View in genome browser Blueprint Blood ChIP-seq H3K4me3-histone-mark peaks (bed6) [Life stage: Child] [Histone ChIP-seq peaks]
Show metadata Identifier NGBLP2H3TXSD2B Data Source Blueprint Download track Download Number of intervals 22,474 bp covered 24,469,209 Output type peaks Genome build hg38 cell type Blood Biosample type Primary tissue Biosamples term id UBERON:0000178 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody H3K4me3 Assay ChIP-seq File format bed bed6 File size 321,618 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58798.Blueprint.ERS1028014.H3K4me3.peak_calls.bed.gz Processed file md5 66363fe6cad5b62e0edc6f4ac04e9094 wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58798.Blueprint.ERS1028014.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/58798.Blueprint.ERS1028014.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/ChIP-seq/bed6/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/58798.Blueprint.ERS1028014.H3K4me3.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/58798.Blueprint.ERS1028014.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 189ad8b3278fa6765747de1e48239aa3 Data Category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks Track Description Original_cell_type=Capillary blood;ID=ERS1028014;disease=T-cell Acute Lymphocytic Leukemia;donor_id=T12C;donor_age=0-5;donor_sex=Male;sample_ontology=http://purl.obolibrary.org/obo/UBERON_0013757;schema=BED6;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.lisanwan system category Cardiovascular life stage Child trackName Blueprint Blood ChIP-seq H3K4me3-histone-mark peaks (bed6) [Life stage: Child] [Histone ChIP-seq peaks]
NGBLP2H5ACM25C Download track View in genome browser Blueprint CD4+ alpha-beta T cell WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]
Show metadata Identifier NGBLP2H5ACM25C Data Source Blueprint Download track Download Number of intervals 255 bp covered 37,194 Output type peaks Genome build hg38 cell type CD4+ alpha-beta T cell Biosample type Primary cell Biosamples term id CL:0000624 Tissue category Blood ENCODE Experiment id Not applicable Biological replicate(s) Not applicable Technical replicate Not applicable Antibody Not applicable Assay WGB-Seq File format bed bed4 File size 3,273 Downloaded date 03/12/2021 Release date 08/31/2016 Date added to FILER 04/10/2021 Processed File Download URL https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/61461.Blueprint.ERS392581.WGB-Seq.peak_calls.bed.gz Processed file md5 ccb5089196130eabd84e5369ddaa63af wget command wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/61461.Blueprint.ERS392581.WGB-Seq.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ tabix_index Download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/61461.Blueprint.ERS392581.WGB-Seq.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_Blueprint/WGB-Seq/bed4/hg38/ Link out URL https://ihec-epigenomes.org/ Raw File URL https://epigenomesportal.ca/tracks/Blueprint/hg38/61461.Blueprint.ERS392581.WGB-Seq.peak_calls.bigBed Raw file download wget https://tf.lisanwanglab.org/GADB/FILER2/Annotationtracks/Downloads/IHEC/Blueprint/61461.Blueprint.ERS392581.WGB-Seq.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/Blueprint/ Raw file md5 23cc195978bc2eb68118fb0bd39ad3f3 Data Category Methylation Genomic feature type WGB-Seq peaks Track Description Original_cell_type=CD4-positive, alpha-beta T cell;ID=ERS392581;disease=Type 1 diabetes mellitus;donor_id=145.1;donor_age=40-45;donor_sex=Female;sample_ontology=http://purl.obolibrary.org/obo/CL_0000624;schema=BED4;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http://tf.l system category Cardiovascular life stage Adult trackName Blueprint CD4+ alpha-beta T cell WGB-Seq peaks (bed4) [Life stage: Adult] [Methylation]