Small non-coding RNA loci from DASHR2, profiled by short total RNA-seq and small RNA-seq across tissues, primary cells, and cell lines. Coverage spans blood, brain, digestive, and lung tissues across embryonic, fetal, newborn, and adult samples.
Data in this track hub were uniformly downloaded, processed, and harmonized by FILER2. Raw files were obtained from each source repository, converted to BED/bigBed format, lifted to the target genome assembly where necessary, and annotated with standardized metadata including cell type, tissue category, and assay type.
Source: http://dashr2.lisanwanglab.org/index.php
Publication: DASHR 2.0: integrated database of human small non-coding RNA genes and mature products
Citation: Kuksa PP, Amlie-Wolf A, Katanić Ž, Valladares O, Wang LS, Leung YY. DASHR 2.0: integrated database of human small non-coding RNA genes and mature products. Bioinformatics. 2019;35(6):1033-1039. doi:10.1093/bioinformatics/bty709
Funding: This work is supported by the National Institute of General Medical Sciences (R01-GM099962 to all co-authors); National Institute on Aging (U54-AG052427, U01-AG032984, U24-AG041689, UF1-AG047133 to P.P.K., Z.K., O.V., L.S.W. and Y.Y.L.), National Institute on Aging (T32-AG00255 to A.A.W.). Funding for open access charge: National Institute on Aging (U24-AG041689).