README file for the ENCODE_GM_DNase-seq_broadpeak_hg19 dataset

I. Description of the dataset
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Data source: ENCODE

Genome build: hg19

Contents: GM DNase-seq [genetic modification followed by DNase-seq] hotspots [broad peak]

Dataset URL: https://tf.lisanwanglab.org/GADB/Annotationtracks/ENCODE/data/GM_DNase-seq/broadpeak/hg19/

Acknowledgements: 


II. Dataset version number
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v2_12_05_2024	


III. Files in the dataset
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MANIFEST


IV. Contributors
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Jeffrey Cifello <Jeffrey.Cifello@pennmedicine.upenn.edu>
Prabhakaran Gangadharan <pganga@pennmedicine.upenn.edu>
Luke Carter <Luke.Carter@pennmedicine.upenn.edu>
Pavel P. Kuksa <pkuksa@pennmedicine.upenn.edu>
Fanny Leung <yyee@pennmedicine.upenn.edu>


V. Workflow description
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VI. Input files and Resources
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VII. File Contents
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1. E.g.,  ENCFF094KQA.bed.gz



2. ENCFF094KQA.bed.gz.tbi

Annotation track has been tabix-indexed to alllow for efficient retrieval of annotations based on `chr` and `position`.