Browse FILER
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Description of FILER metadata columns (XLS): FILER_v1_metadata_schema.xlsx.
For descriptions of the main output data types and data terms, please see data glossary, data terms, and references therein. For additional information, please also see data Summary page (‘Data description’ tab) and the About page.
| #Identifier | Data Source | Download file | Number of intervals | bp covered | Output type | Genome build | cell type | Biosample type | Biosamples term id | Tissue category | ENCODE Experiment id | Biological replicate(s) | Technical replicate | Antibody | Assay | File format | File size | Release date | Date added to FILER | Data Category | Genomic feature type | Track Description | system category | life stage | trackName |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NGEN024795 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | GM23338 | Cell line | EFO:0007950 | iPSC | ENCSR894GAC | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,166 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=GM23338 originated from GM23248;Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF416FDJ.replacement.bigBed;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Stem Cell | Unknown | ENCODE GM23338 (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR894GAC] [Orig: Biosample_summary=GM23338 originated from GM23248;Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF416FDJ.replacement.bigBed;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN024969 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Adrenal gland | Tissue | UBERON:0002369 | Endocrine | ENCSR895SFC | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,597 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Adrenal gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF484JJW.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Endocrine | Adult | ENCODE Adrenal gland (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR895SFC] [Orig: Biosample_summary=Adrenal gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF484JJW.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN025203 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Skin | Tissue | UBERON:0004264 | Skin | ENCSR798NKG | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,859 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Lower leg skin tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF878UAK.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Skin;tissue_of_origin=Lower leg | Integumentary | Adult | ENCODE Skin (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR798NKG] [Orig: Biosample_summary=Lower leg skin tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF878UAK.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Skin;tissue_of_origin=Lower leg] [Life stage: Adult] |
| NGEN025380 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR227VCK | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,892 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Prostate gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF877XCQ.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Prostate gland (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR227VCK] [Orig: Biosample_summary=Prostate gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF877XCQ.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN025490 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Myocyte | In vitro differentiated cells | CL:0000187 | Skeletal Muscle | ENCSR782VMS | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,999 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Myocyte originated from LHCN-M2 male adult (41 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF104NQH.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Muscular | Adult | ENCODE Myocyte (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR782VMS] [Orig: Biosample_summary=Myocyte originated from LHCN-M2 male adult (41 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF104NQH.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN025493 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Thyroid gland | Tissue | UBERON:0002046 | Endocrine | ENCSR567SVD | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,934 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Thyroid gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF130XKD.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Endocrine | Adult | ENCODE Thyroid gland (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR567SVD] [Orig: Biosample_summary=Thyroid gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF130XKD.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN025503 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Gastrocnemius medialis | Tissue | UBERON:0011907 | Skeletal Muscle | ENCSR505IZZ | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,075 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Gastrocnemius medialis tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF117VCS.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Muscular | Adult | ENCODE Gastrocnemius medialis (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR505IZZ] [Orig: Biosample_summary=Gastrocnemius medialis tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF117VCS.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN025839 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | GM23248 | Cell line | EFO:0005723 | Skin | ENCSR138ZXT | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,190 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=GM23248;Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF876RSC.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Integumentary | Unknown | ENCODE GM23248 (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR138ZXT] [Orig: Biosample_summary=GM23248;Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF876RSC.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN025923 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Gastrocnemius medialis | Tissue | UBERON:0011907 | Skeletal Muscle | ENCSR655NLY | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,136 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Gastrocnemius medialis tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF446BNX.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Muscular | Adult | ENCODE Gastrocnemius medialis (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR655NLY] [Orig: Biosample_summary=Gastrocnemius medialis tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF446BNX.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN025991 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Uterus | Tissue | UBERON:0000995 | Female Reproductive | ENCSR486QHW | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,584 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Uterus tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF620UQT.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Uterus (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR486QHW] [Orig: Biosample_summary=Uterus tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF620UQT.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN026154 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Adrenal gland | Tissue | UBERON:0002369 | Endocrine | ENCSR895SFC | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,597 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Adrenal gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF716FSI.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Endocrine | Adult | ENCODE Adrenal gland (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR895SFC] [Orig: Biosample_summary=Adrenal gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF716FSI.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN026240 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Atrium auricular region | Tissue | UBERON:0006631 | Heart | ENCSR258UGT | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 15,191 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Right atrium auricular region tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF759AOX.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;previous_filer_celltype=Atrium auricular region | Cardiovascular | Adult | ENCODE Atrium auricular region (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR258UGT] [Orig: Biosample_summary=Right atrium auricular region tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF759AOX.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;previous_filer_celltype=Atrium auricular region] [Life stage: Adult] |
| NGEN026283 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Vagina | Tissue | UBERON:0000996 | Female Reproductive | ENCSR591LEQ | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,969 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Vagina tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF436KFL.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Vagina (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR591LEQ] [Orig: Biosample_summary=Vagina tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF436KFL.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN026373 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Thyroid gland | Tissue | UBERON:0002046 | Endocrine | ENCSR567SVD | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,786 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Thyroid gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF539QGK.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Endocrine | Adult | ENCODE Thyroid gland (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR567SVD] [Orig: Biosample_summary=Thyroid gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF539QGK.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN026506 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Left ventricle | Tissue | UBERON:0002084 | Heart | ENCSR888ZAA | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,931 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Heart left ventricle tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF947LNH.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Cardiovascular | Adult | ENCODE Left ventricle (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR888ZAA] [Orig: Biosample_summary=Heart left ventricle tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF947LNH.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN026575 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Bipolar neuron | In vitro differentiated cells | CL:0000103 | Brain | ENCSR765ZSI | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,293 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Bipolar neuron originated from GM23338 treated with 0.5 ?g/mL doxycycline hyclate for 4 days male adult (53 years);Lab=Ali Mortazavi, UCI;System=central nervous system;Submitted_track_name=ENCFF406AEN.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Nervous | Adult | ENCODE Bipolar neuron (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR765ZSI] [Orig: Biosample_summary=Bipolar neuron originated from GM23338 treated with 0.5 ?g/mL doxycycline hyclate for 4 days male adult (53 years);Lab=Ali Mortazavi, UCI;System=central nervous system;Submitted_track_name=ENCFF406AEN.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN026924 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Skin | Tissue | UBERON:0004264 | Skin | ENCSR021JTM | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,927 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Lower leg skin tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF952NBA.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Skin;tissue_of_origin=Lower leg | Integumentary | Adult | ENCODE Skin (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR021JTM] [Orig: Biosample_summary=Lower leg skin tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF952NBA.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Skin;tissue_of_origin=Lower leg] [Life stage: Adult] |
| NGEN027146 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Neuronal progenitor cell | Stem cell | NTR:0000711 | Nervous | ENCSR624LFP | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,114 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Neural progenitor cell originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=central nervous system;Submitted_track_name=ENCFF035RHI.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Neuronal progenitor cell;old_biosample_type=In vitro differentiated cells | Nervous | Embryonic | ENCODE Neuronal progenitor cell (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR624LFP] [Orig: Biosample_summary=Neural progenitor cell originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=central nervous system;Submitted_track_name=ENCFF035RHI.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Neuronal progenitor cell;old_biosample_type=In vitro differentiated cells |
| NGEN027411 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR165GUQ | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,694 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=HCT116;Lab=Ali Mortazavi, UCI;System=digestive system;Submitted_track_name=ENCFF574WCG.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Unknown | ENCODE HCT116 (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR165GUQ] [Orig: Biosample_summary=HCT116;Lab=Ali Mortazavi, UCI;System=digestive system;Submitted_track_name=ENCFF574WCG.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN027547 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Pancreas | Tissue | UBERON:0001150 | Digestive | ENCSR800WFS | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,116 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Body of pancreas tissue male adult (54 years);Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF640TVG.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Adult | ENCODE Pancreas (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR800WFS] [Orig: Biosample_summary=Body of pancreas tissue male adult (54 years);Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF640TVG.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN027638 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Liver lobe | Tissue | UBERON:0001114 | Liver | ENCSR776XYQ | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,982 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Right lobe of liver tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF655SQN.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Adult | ENCODE Liver lobe (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR776XYQ] [Orig: Biosample_summary=Right lobe of liver tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF655SQN.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN027685 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Left ventricle | Tissue | UBERON:0002084 | Heart | ENCSR425ZMS | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,815 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Heart left ventricle tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF499MAC.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Cardiovascular | Adult | ENCODE Left ventricle (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR425ZMS] [Orig: Biosample_summary=Heart left ventricle tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF499MAC.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN027839 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR223FVU | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,661 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Ali Mortazavi, UCI;System=circulatory system,reproductive system;Submitted_track_name=ENCFF367NUV.replacement.bigBed;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=01/06/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein | Embryo | Newborn | ENCODE Endothelial cell (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR223FVU] [Orig: Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Ali Mortazavi, UCI;System=circulatory system,reproductive system;Submitted_track_name=ENCFF367NUV.replacement.bigBed;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=01/06/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Endothelial cell;tissue_of_o |
| NGEN027993 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Smooth muscle cell | In vitro differentiated cells | CL:0000192 | Muscle | ENCSR625DUG | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,234 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Smooth muscle cell originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF692WDQ.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Muscular | Embryonic | ENCODE Smooth muscle cell (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR625DUG] [Orig: Biosample_summary=Smooth muscle cell originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF692WDQ.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Embryonic] |
| NGEN028057 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Adrenal gland | Tissue | UBERON:0002369 | Endocrine | ENCSR381ADE | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,940 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Adrenal gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF871OZL.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Endocrine | Adult | ENCODE Adrenal gland (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR381ADE] [Orig: Biosample_summary=Adrenal gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF871OZL.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN028317 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Ovary | Tissue | UBERON:0000992 | Female Reproductive | ENCSR854NNW | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,818 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Ovary tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF706ZKV.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Ovary (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR854NNW] [Orig: Biosample_summary=Ovary tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF706ZKV.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN028455 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Vagina | Tissue | UBERON:0000996 | Female Reproductive | ENCSR591LEQ | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,796 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Vagina tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF592AQC.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Vagina (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR591LEQ] [Orig: Biosample_summary=Vagina tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF592AQC.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN028599 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Skin | Tissue | UBERON:0004264 | Skin | ENCSR798NKG | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,975 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Lower leg skin tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF746SFE.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Skin;tissue_of_origin=Lower leg | Integumentary | Adult | ENCODE Skin (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR798NKG] [Orig: Biosample_summary=Lower leg skin tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF746SFE.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Skin;tissue_of_origin=Lower leg] [Life stage: Adult] |
| NGEN028620 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Pancreas | Tissue | UBERON:0001150 | Digestive | ENCSR538MBL | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,901 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Body of pancreas tissue male adult (37 years);Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF925PAF.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Adult | ENCODE Pancreas (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR538MBL] [Orig: Biosample_summary=Body of pancreas tissue male adult (37 years);Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF925PAF.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN028697 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Neuronal progenitor cell | Stem cell | NTR:0000711 | Nervous | ENCSR624LFP | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,088 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Neural progenitor cell originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=central nervous system;Submitted_track_name=ENCFF431FLR.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Neuronal progenitor cell;old_biosample_type=In vitro differentiated cells | Nervous | Embryonic | ENCODE Neuronal progenitor cell (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR624LFP] [Orig: Biosample_summary=Neural progenitor cell originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=central nervous system;Submitted_track_name=ENCFF431FLR.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Neuronal progenitor cell;old_biosample_type=In vitro differentiated cells |
| NGEN028907 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AJL | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,218 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=K562;Lab=Ali Mortazavi, UCI;System=immune system;Submitted_track_name=ENCFF559GSR.replacement.bigBed;Experiment_date_released=02/02/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Cardiovascular | Unknown | ENCODE K562 (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR000AJL] [Orig: Biosample_summary=K562;Lab=Ali Mortazavi, UCI;System=immune system;Submitted_track_name=ENCFF559GSR.replacement.bigBed;Experiment_date_released=02/02/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN028921 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Uterus | Tissue | UBERON:0000995 | Female Reproductive | ENCSR101DVP | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,548 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Uterus tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF038ZOE.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Uterus (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR101DVP] [Orig: Biosample_summary=Uterus tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF038ZOE.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN029085 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Vagina | Tissue | UBERON:0000996 | Female Reproductive | ENCSR065OIA | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,756 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Vagina tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF699BEY.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Vagina (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR065OIA] [Orig: Biosample_summary=Vagina tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF699BEY.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN029209 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR630JWA | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,746 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Prostate gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF132ICC.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Prostate gland (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR630JWA] [Orig: Biosample_summary=Prostate gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF132ICC.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN029415 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | HCT116 | Cell line | EFO:0002824 | Digestive | ENCSR165GUQ | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,790 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=HCT116;Lab=Ali Mortazavi, UCI;System=digestive system;Submitted_track_name=ENCFF555VUJ.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Unknown | ENCODE HCT116 (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR165GUQ] [Orig: Biosample_summary=HCT116;Lab=Ali Mortazavi, UCI;System=digestive system;Submitted_track_name=ENCFF555VUJ.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN029421 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR630JWA | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,862 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Prostate gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF205MSG.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Prostate gland (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR630JWA] [Orig: Biosample_summary=Prostate gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF205MSG.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN029453 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Uterus | Tissue | UBERON:0000995 | Female Reproductive | ENCSR101DVP | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,396 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Uterus tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF119IBK.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Uterus (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR101DVP] [Orig: Biosample_summary=Uterus tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF119IBK.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN029668 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AJK | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,842 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=GM12878;Lab=Ali Mortazavi, UCI;System=immune system;Submitted_track_name=ENCFF851PCC.replacement.bigBed;Experiment_date_released=02/02/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR000AJK] [Orig: Biosample_summary=GM12878;Lab=Ali Mortazavi, UCI;System=immune system;Submitted_track_name=ENCFF851PCC.replacement.bigBed;Experiment_date_released=02/02/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN029835 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Testis | Tissue | UBERON:0000473 | Male Reproductive | ENCSR882QTS | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,244 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Testis tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF165FXU.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Testis (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR882QTS] [Orig: Biosample_summary=Testis tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF165FXU.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN030316 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Left ventricle | Tissue | UBERON:0002084 | Heart | ENCSR888ZAA | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,656 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Heart left ventricle tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF102CZB.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Cardiovascular | Adult | ENCODE Left ventricle (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR888ZAA] [Orig: Biosample_summary=Heart left ventricle tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF102CZB.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN030397 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Ovary | Tissue | UBERON:0000992 | Female Reproductive | ENCSR854NNW | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,640 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Ovary tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF362IFM.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Ovary (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR854NNW] [Orig: Biosample_summary=Ovary tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF362IFM.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN030405 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Atrium auricular region | Tissue | UBERON:0006631 | Heart | ENCSR326JQW | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,062 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Right atrium auricular region tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF163WVQ.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21;previous_filer_celltype=Atrium auricular region | Cardiovascular | Adult | ENCODE Atrium auricular region (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR326JQW] [Orig: Biosample_summary=Right atrium auricular region tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF163WVQ.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21;previous_filer_celltype=Atrium auricular region] [Life stage: Adult] |
| NGEN030712 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Left ventricle | Tissue | UBERON:0002084 | Heart | ENCSR425ZMS | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 15,357 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Heart left ventricle tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF113OUT.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Cardiovascular | Adult | ENCODE Left ventricle (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR425ZMS] [Orig: Biosample_summary=Heart left ventricle tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF113OUT.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN030745 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | K562 | Cell line | EFO:0002067 | Blood | ENCSR000AJL | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,944 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=K562;Lab=Ali Mortazavi, UCI;System=immune system;Submitted_track_name=ENCFF334ZSG.replacement.bigBed;Experiment_date_released=02/02/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Cardiovascular | Unknown | ENCODE K562 (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR000AJL] [Orig: Biosample_summary=K562;Lab=Ali Mortazavi, UCI;System=immune system;Submitted_track_name=ENCFF334ZSG.replacement.bigBed;Experiment_date_released=02/02/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN030767 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | GM23248 | Cell line | EFO:0005723 | Skin | ENCSR138ZXT | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,255 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=GM23248;Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF800WNM.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Integumentary | Unknown | ENCODE GM23248 (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR138ZXT] [Orig: Biosample_summary=GM23248;Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF800WNM.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN030810 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Atrium auricular region | Tissue | UBERON:0006631 | Heart | ENCSR258UGT | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,982 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Right atrium auricular region tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF964EIQ.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;previous_filer_celltype=Atrium auricular region | Cardiovascular | Adult | ENCODE Atrium auricular region (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR258UGT] [Orig: Biosample_summary=Right atrium auricular region tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=circulatory system;Submitted_track_name=ENCFF964EIQ.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;previous_filer_celltype=Atrium auricular region] [Life stage: Adult] |
| NGEN030901 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR201IBH | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,000 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=MCF-7;Lab=Ali Mortazavi, UCI;System=integumental system,exocrine system;Submitted_track_name=ENCFF645ATF.replacement.bigBed;Experiment_date_released=01/06/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Unknown | ENCODE MCF-7 (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR201IBH] [Orig: Biosample_summary=MCF-7;Lab=Ali Mortazavi, UCI;System=integumental system,exocrine system;Submitted_track_name=ENCFF645ATF.replacement.bigBed;Experiment_date_released=01/06/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN031131 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR257DJT | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,438 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=HepG2;Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF897GZH.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Unknown | ENCODE HepG2 (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR257DJT] [Orig: Biosample_summary=HepG2;Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF897GZH.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN031577 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Liver lobe | Tissue | UBERON:0001114 | Liver | ENCSR776XYQ | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,930 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Right lobe of liver tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF109UBJ.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Adult | ENCODE Liver lobe (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR776XYQ] [Orig: Biosample_summary=Right lobe of liver tissue female adult (53 years);Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF109UBJ.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN031718 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR408BER | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,779 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=H1;Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF664FQY.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell | Embryo | Embryonic | ENCODE H1-hESC (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR408BER] [Orig: Biosample_summary=H1;Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF664FQY.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell] [Life stage: Embryonic] |
| NGEN031747 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Pancreas | Tissue | UBERON:0001150 | Digestive | ENCSR800WFS | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,099 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Body of pancreas tissue male adult (54 years);Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF835JHC.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Adult | ENCODE Pancreas (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR800WFS] [Orig: Biosample_summary=Body of pancreas tissue male adult (54 years);Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF835JHC.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN031808 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Testis | Tissue | UBERON:0000473 | Male Reproductive | ENCSR882QTS | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,353 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Testis tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF523FNX.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Testis (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR882QTS] [Orig: Biosample_summary=Testis tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF523FNX.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN032208 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Testis | Tissue | UBERON:0000473 | Male Reproductive | ENCSR494FIS | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,420 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Testis tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF249XDU.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Testis (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR494FIS] [Orig: Biosample_summary=Testis tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF249XDU.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN032410 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Hepatocyte | In vitro differentiated cells | CL:0000182 | Liver | ENCSR448MNV | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,335 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Hepatocyte originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF115IZF.replacement.bigBed;Experiment_date_released=02/06/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Embryonic | ENCODE Hepatocyte (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR448MNV] [Orig: Biosample_summary=Hepatocyte originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF115IZF.replacement.bigBed;Experiment_date_released=02/06/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Embryonic] |
| NGEN032582 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Skin | Tissue | UBERON:0004264 | Skin | ENCSR021JTM | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,938 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Lower leg skin tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF543AXP.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Skin;tissue_of_origin=Lower leg | Integumentary | Adult | ENCODE Skin (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR021JTM] [Orig: Biosample_summary=Lower leg skin tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF543AXP.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Skin;tissue_of_origin=Lower leg] [Life stage: Adult] |
| NGEN032629 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Hepatocyte | In vitro differentiated cells | CL:0000182 | Liver | ENCSR448MNV | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,274 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Hepatocyte originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF500SNI.replacement.bigBed;Experiment_date_released=02/06/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Embryonic | ENCODE Hepatocyte (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR448MNV] [Orig: Biosample_summary=Hepatocyte originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF500SNI.replacement.bigBed;Experiment_date_released=02/06/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Embryonic] |
| NGEN032641 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Testis | Tissue | UBERON:0000473 | Male Reproductive | ENCSR494FIS | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,276 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Testis tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF561ANR.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Testis (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR494FIS] [Orig: Biosample_summary=Testis tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF561ANR.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN032660 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | GM23338 | Cell line | EFO:0007950 | iPSC | ENCSR894GAC | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,111 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=GM23338 originated from GM23248;Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF904VEK.replacement.bigBed;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Stem Cell | Unknown | ENCODE GM23338 (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR894GAC] [Orig: Biosample_summary=GM23338 originated from GM23248;Lab=Ali Mortazavi, UCI;System=integumental system;Submitted_track_name=ENCFF904VEK.replacement.bigBed;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN032715 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Endothelial cell | Primary cell | CL:0002618 | Umbilical Cord | ENCSR223FVU | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,579 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Ali Mortazavi, UCI;System=circulatory system,reproductive system;Submitted_track_name=ENCFF292ZCR.replacement.bigBed;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=01/06/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Endothelial cell;tissue_of_origin=Umbilical vein | Embryo | Newborn | ENCODE Endothelial cell (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR223FVU] [Orig: Biosample_summary=Endothelial cell of umbilical vein newborn;Lab=Ali Mortazavi, UCI;System=circulatory system,reproductive system;Submitted_track_name=ENCFF292ZCR.replacement.bigBed;previous_filer_cell_type=Endothelial cell of umbilical vein;Experiment_date_released=01/06/2016;File_analysis_title=Lab custom GRCh38 miRBase V21;premapping_cell_type=Endothelial cell;tissue_of_o |
| NGEN032789 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Adrenal gland | Tissue | UBERON:0002369 | Endocrine | ENCSR381ADE | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,967 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Adrenal gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF769ZCR.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Endocrine | Adult | ENCODE Adrenal gland (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR381ADE] [Orig: Biosample_summary=Adrenal gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF769ZCR.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN032817 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Vagina | Tissue | UBERON:0000996 | Female Reproductive | ENCSR065OIA | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,992 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Vagina tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF868GRW.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Vagina (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR065OIA] [Orig: Biosample_summary=Vagina tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF868GRW.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN033117 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Thyroid gland | Tissue | UBERON:0002046 | Endocrine | ENCSR869POD | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,181 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Thyroid gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF190WML.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21 | Endocrine | Adult | ENCODE Thyroid gland (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR869POD] [Orig: Biosample_summary=Thyroid gland tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=endocrine system;Submitted_track_name=ENCFF190WML.replacement.bigBed;Project=EN-TEx;Experiment_date_released=01/31/2017;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN033231 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Prostate gland | Tissue | UBERON:0002367 | Male Reproductive | ENCSR227VCK | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,421 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Prostate gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF443WHT.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Prostate gland (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR227VCK] [Orig: Biosample_summary=Prostate gland tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF443WHT.replacement.bigBed;Project=EN-TEx;Experiment_date_released=08/01/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN033822 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | HepG2 | Cell line | EFO:0001187 | Liver | ENCSR257DJT | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,460 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=HepG2;Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF329PMO.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21 | Digestive | Unknown | ENCODE HepG2 (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR257DJT] [Orig: Biosample_summary=HepG2;Lab=Ali Mortazavi, UCI;System=digestive system,exocrine system,endocrine system;Submitted_track_name=ENCFF329PMO.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN034342 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | MCF-7 | Cell line | EFO:0001203 | Breast | ENCSR201IBH | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,873 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=MCF-7;Lab=Ali Mortazavi, UCI;System=integumental system,exocrine system;Submitted_track_name=ENCFF754NCF.replacement.bigBed;Experiment_date_released=01/06/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Unknown | ENCODE MCF-7 (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR201IBH] [Orig: Biosample_summary=MCF-7;Lab=Ali Mortazavi, UCI;System=integumental system,exocrine system;Submitted_track_name=ENCFF754NCF.replacement.bigBed;Experiment_date_released=01/06/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN034467 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | GM12878 | Cell line | EFO:0002784 | Blood | ENCSR000AJK | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 14,630 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=GM12878;Lab=Ali Mortazavi, UCI;System=immune system;Submitted_track_name=ENCFF436PBP.replacement.bigBed;Experiment_date_released=02/02/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Cardiovascular | Unknown | ENCODE GM12878 (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR000AJK] [Orig: Biosample_summary=GM12878;Lab=Ali Mortazavi, UCI;System=immune system;Submitted_track_name=ENCFF436PBP.replacement.bigBed;Experiment_date_released=02/02/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Unknown] |
| NGEN034564 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Gastrocnemius medialis | Tissue | UBERON:0011907 | Skeletal Muscle | ENCSR655NLY | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,043 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Gastrocnemius medialis tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF064ECE.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Muscular | Adult | ENCODE Gastrocnemius medialis (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR655NLY] [Orig: Biosample_summary=Gastrocnemius medialis tissue male adult (54 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF064ECE.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN034679 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | H1-hESC | Stem cell | EFO:0003042 | Embryo | ENCSR408BER | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 12,742 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=H1;Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF643ESY.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell | Embryo | Embryonic | ENCODE H1-hESC (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR408BER] [Orig: Biosample_summary=H1;Lab=Ali Mortazavi, UCI;Submitted_track_name=ENCFF643ESY.replacement.bigBed;Experiment_date_released=12/10/2015;File_analysis_title=Lab custom GRCh38 miRBase V21;old_system_category=Stem Cell;premapping_cell_type=H1-hESC;tissue_of_origin=Embryo;old_tissue_category=Stem Cell;old_biosample_type=Cell line;old_life_stage=Stem Cell] [Life stage: Embryonic] |
| NGEN034721 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Bipolar neuron | In vitro differentiated cells | CL:0000103 | Brain | ENCSR765ZSI | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,278 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Bipolar neuron originated from GM23338 treated with 0.5 ?g/mL doxycycline hyclate for 4 days male adult (53 years);Lab=Ali Mortazavi, UCI;System=central nervous system;Submitted_track_name=ENCFF950GOF.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Nervous | Adult | ENCODE Bipolar neuron (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR765ZSI] [Orig: Biosample_summary=Bipolar neuron originated from GM23338 treated with 0.5 ?g/mL doxycycline hyclate for 4 days male adult (53 years);Lab=Ali Mortazavi, UCI;System=central nervous system;Submitted_track_name=ENCFF950GOF.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN034861 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Smooth muscle cell | In vitro differentiated cells | CL:0000192 | Muscle | ENCSR625DUG | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,225 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Smooth muscle cell originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF091ZBG.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Muscular | Embryonic | ENCODE Smooth muscle cell (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR625DUG] [Orig: Biosample_summary=Smooth muscle cell originated from H9, female embryo (5 days);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF091ZBG.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Embryonic] |
| NGEN035145 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Myocyte | In vitro differentiated cells | CL:0000187 | Skeletal Muscle | ENCSR782VMS | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,119 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Myocyte originated from LHCN-M2 male adult (41 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF338RQN.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Muscular | Adult | ENCODE Myocyte (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR782VMS] [Orig: Biosample_summary=Myocyte originated from LHCN-M2 male adult (41 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF338RQN.replacement.bigBed;Experiment_date_released=01/19/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN035207 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Gastrocnemius medialis | Tissue | UBERON:0011907 | Skeletal Muscle | ENCSR505IZZ | 2 | 2_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,016 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Gastrocnemius medialis tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF621KMO.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Muscular | Adult | ENCODE Gastrocnemius medialis (repl. 2) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR505IZZ] [Orig: Biosample_summary=Gastrocnemius medialis tissue male adult (37 years);Lab=Ali Mortazavi, UCI;System=musculature;Submitted_track_name=ENCFF621KMO.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
| NGEN035414 | ENCODE | Download | 797 | 16,468 | microRNA quantifications | hg38 | Uterus | Tissue | UBERON:0000995 | Female Reproductive | ENCSR486QHW | 1 | 1_1 | Not applicable | microRNA counts | bed bed6+2 miRNA | 13,996 | 6/26/17 | 07/16/20 | Expression | microRNA counts microRNA quantifications | Biosample_summary=Uterus tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF354ALP.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21 | Reproductive | Adult | ENCODE Uterus (repl. 1) microRNA counts microRNA quantifications (bed6+2 miRNA) [Experiment: ENCSR486QHW] [Orig: Biosample_summary=Uterus tissue female adult (51 years);Lab=Ali Mortazavi, UCI;System=reproductive system;Submitted_track_name=ENCFF354ALP.replacement.bigBed;Project=EN-TEx;Experiment_date_released=07/29/2016;File_analysis_title=Lab custom GRCh38 miRBase V21] [Life stage: Adult] |
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